Os01g0136800

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0136800| Description = Protein kinase-like domain containing protein| Version = NM_001048495.1 GI:115434403 GeneID:4325670| Length = 5062 b...")
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Gene Name

Os01g0136800

Description

Protein kinase-like domain containing protein

Version

NM_001048495.1 GI:115434403 GeneID:4325670

Length

5062 bp

Definition

Oryza sativa Japonica Group Os01g0136800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1976423..1981484

Sequence Coding Region

1976645..1977561,1977649..1977909,1978243..1978275,1980556..1981345

Expression

GEO Profiles:Os01g0136800

Genome Context

<gbrowseImage1> name=NC_008394:1976423..1981484 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1976423..1981484 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatcctgctttgctactgctccccctcgcctccttgctgcatgccgcggcagcaattggccacaacgagaccagcaccagtggcaacacaagctgcacgccggcgagatgcgggaacctgaccatcagttaccccttctcgctcagcggcgtgcagccggtgtcctgcggctacccggtgttggacctcacctgcgacaaccgaaccggccgcgcgttcctcagcaggacgttcagggaccacctgtttcgcgtggacagtattttctacgagaataactcgctggtggcggccgtagagaccaccttcgccggcgacgccgactgccccgtcccggatttcaacgtgacatccagcctcagtccctacccgttcatcatcagcaacaccaacaagtatctcgcattcatctatgactgctcgattcctgaacacgttgggcagctgcaacggccatgtggaaaccggacgatgggagcttacatctccgacaagtggaacagcacaccaccgtccggggttcgagggaactgcaactctgtcagcgtgccggtgcgtgggtactatgatggaatgaagccggtgagtggacactacgagcaattgatcaaagatgggttcgtcttggaatggatgaggtcggtaatgggagatcaagactgcgatgggtgcagaaggagaggcggggagtgcaggttcgaacagctttcgttccagtgcttctgccccgacgggttgctctgctccaattcaacccgtaccaacacaacgtcaagccatccatcaggcaaggttaatcgaggaatcaagattgccgcaggaaccgcagcggctgttgtatgtctcggtatacttggcgttggctccactgtgttgtatacccggaggaagaggaaaagatctgcatcctttgaaggtctcatccatggagggacgccattgccatcactcacgaaagaattcagcctcgccggcttggcatatacccacatcttcacctacgaggagctcgacgaggctaccgacggcttcagcgacgcccgggagctcggcgtcggcggcttcggcacagtgtacaaagggatactccggaatggggacacggtggcggtgaagcggctgtacaagaacagctacaagagcgtggagcaattccagaacgaggtgggcatcctgtcgcggctgcgccacccaaacctcgtcacgctcttcggctgcacgtcgcagaccaacagccgcgacctgctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctgcacggcggcgcggcggcgcggtcgtcctccctcgactggccgacgcggctcggcatcgccgtcgagacggccagcgcgctggagtacctccacacggtggagccgcaggtggtgcaccgcgacgtgaagacgaacaacatcctcctcgacgaagggttccacgtgaaggtggccgacttcggcctctcccggctgttcccggcggacgccacgcacgtgtccacggcgccgcagggcacgccggggtacctcgacccgatgtaccaccagtgctaccagctgacggacaagagcgacgtgtacagcttcggcgtggtgctcgtcgagctcatctcctccaagccggcggtggacatgaaccggcgcggcggcgacgtcaacctggccaacatggccgtgcacatgatccagagctacgagatggagcagctggtggacccgcagctcgggtacgcgtcggacggcgagacgaggaggacggtcgatctcgtcgccgaggtggcgttccggtgcttgcagccggagcaggacgtgaggccgccgatcggtgaggtgttggacgcgctgagagaagctcagcggatggacaaggtaggctacgtcaaggacgacgccgggctggtcaagaagagccgagacggctctccggactgcgtcatgtaccagtggattagcccatccaccacttccaataacagcagctga</cdnaseq>

Protein Sequence

<aaseq>MHPALLLLPLASLLHAAAAIGHNETSTSGNTSCTPARCGNLTIS YPFSLSGVQPVSCGYPVLDLTCDNRTGRAFLSRTFRDHLFRVDSIFYENNSLVAAVET TFAGDADCPVPDFNVTSSLSPYPFIISNTNKYLAFIYDCSIPEHVGQLQRPCGNRTMG AYISDKWNSTPPSGVRGNCNSVSVPVRGYYDGMKPVSGHYEQLIKDGFVLEWMRSVMG DQDCDGCRRRGGECRFEQLSFQCFCPDGLLCSNSTRTNTTSSHPSGKVNRGIKIAAGT AAAVVCLGILGVGSTVLYTRRKRKRSASFEGLIHGGTPLPSLTKEFSLAGLAYTHIFT YEELDEATDGFSDARELGVGGFGTVYKGILRNGDTVAVKRLYKNSYKSVEQFQNEVGI LSRLRHPNLVTLFGCTSQTNSRDLLLVYEFVPNGTLADHLHGGAAARSSSLDWPTRLG IAVETASALEYLHTVEPQVVHRDVKTNNILLDEGFHVKVADFGLSRLFPADATHVSTA PQGTPGYLDPMYHQCYQLTDKSDVYSFGVVLVELISSKPAVDMNRRGGDVNLANMAVH MIQSYEMEQLVDPQLGYASDGETRRTVDLVAEVAFRCLQPEQDVRPPIGEVLDALREA QRMDKVGYVKDDAGLVKKSRDGSPDCVMYQWISPSTTSNNSS</aaseq>

Gene Sequence

<dnaseqindica>3924..4840#3576..3836#3210..3242#140..929#ggtggttcgctctcttcatctctccaaagtccactccaccctccgcttgcacggatgcaaacaagaatctgccggcaaccttaaccaccctctccttccttgttgtctcgttgatatcttctttctctcctccgatgcgatgcatcctgctttgctactgctccccctcgcctccttgctgcatgccgcggcagcaattggccacaacgagaccagcaccagtggcaacacaagctgcacgccggcgagatgcgggaacctgaccatcagttaccccttctcgctcagcggcgtgcagccggtgtcctgcggctacccggtgttggacctcacctgcgacaaccgaaccggccgcgcgttcctcagcaggacgttcagggaccacctgtttcgcgtggacagtattttctacgagaataactcgctggtggcggccgtagagaccaccttcgccggcgacgccgactgccccgtcccggatttcaacgtgacatccagcctcagtccctacccgttcatcatcagcaacaccaacaagtatctcgcattcatctatgactgctcgattcctgaacacgttgggcagctgcaacggccatgtggaaaccggacgatgggagcttacatctccgacaagtggaacagcacaccaccgtccggggttcgagggaactgcaactctgtcagcgtgccggtgcgtgggtactatgatggaatgaagccggtgagtggacactacgagcaattgatcaaagatgggttcgtcttggaatggatgaggtcggtaatgggagatcaagactgcgatgggtgcagaaggagaggcggggagtgcaggttcgaacagctttcgttccagtgcttctgccccgacgggttgctctgctccaattcaacccgtaccaacacaacgtcaagccatccatcaggtaaggagcgtttgctacctttgcaaaaaatttttttgaagaaatacttttgcattggcgtgagaatgaatacattatgcatattacacgcattgagatacatgttcctacttatcacttaggttgtgctttttgtatgcaaaccttgagggaaaaagttcgtataagaattccaaacaagcttaggaaactgcgagtctgcaaattttgttggtcattatttcttagagctaagagattgctggctattcgtttttcataaagagtagagataatagaaattcaaaggctgctaacattaagacgccacctctggtctgaaactatgaatggcacttccccttgactataatataacaatgcactttcatcatttgaaatggtcaattcgtgtatttgatttcttttaacttcctttcgttttgtttttgactgaaacttcccttgaattgcttcggtttcatctttgatggcaaactgtttcattgaacctctttctttcgttctcctatagcacctactgcactgttcaaaacaaacgttagcagtggaatcaacaaaaaggcagagggtagcagttagtcgctctatcaagttgagcagtcagttgtgacagcatatcgttttcatatatgtctgtgcaaaccttgtgtcaactgccaagtactacttcagttcatcaaaatgtgcgatgtgtcatgtcatccacatcggattgtagcatatgcatgcatctataagagttacatttgtcgataaatgatgcctttgatgttagggaatagagtaaattaatcagctgaaaggggctggcacatgaactaagacccggcaaggaacaaatgaaatccaggggaaaggtgaaagggactaggacgacctagaagtcttctttgtttaaaagaagaaaatgatgtgtgttagtcctgtaatgttcatactgttgttactgtgaaactttatgctttcattagttcggttaatccatatcataagatagattatgctaattattacctaaccaatcttttgggcccatctataatcatttttttaaaccattagatctatctgctcacatgtttacttctttaggggtaaaacaaaaattgttatagctcaaaataaaatgaaaagggtccattttactccctacggattatttcattagttcacttaaccctctaaattatttttttgactcattttacaccaatggcggagctaggttctcaacccagtgggggtcaaaatgcataaatatataacaatgtggggggtcaatctatacaaattttcattgtttcatgtacttttcactatttttcatattatcaatatatatcttgcaaatacctgtggggtcagctgaccccacagttttaacatggctcagccactgttttacaccccaaattattgaaaacagatcatcttgctctctaatggtatttctcttctctgtttctctccaaataaattgtattttgcaatgaaatttggaaggactgatagatatatcataacctatctcccaacattttttagaatttcttttatcattgtatacatatatttaaagcactaggcttgatttaaacatcgaggttttaaattttaaacagatagtcatgatttttttttgaaagtatttttgaaactttgataatggtgttatctatggctctataaaatttcagattaaagtacaactcgtataaagagaaatgctattaatagtttaaggggtaaaatgagttaaaaatagttttgtgggttaagtgaaccaatgaaatagttaggggagtaaaatagagctttttctacgaattttaaagtacaaaacaagcaaactctaatctagacgagcacaaaaagaaaatatccagataaactaatacaaaattataattaaaaaaactaaatgttgcgataaagctttactaaagtggcactataaatacaagctttaaatagtcaatatttttagttagtgataagatacaccatctggttactaatttgtcatttctggtttcttcgtcatgggcaaattttatggtctgtttggtttgatgtccactaccaaaactttggcgggtagagttgaaaaggtacaagataaagccaataatgtcctataagaaacaatttgtgtgcaacctcaattttttttataaagtataaattttagtagggtagcaaaccaagctatagccccctttatttgttccctctcataatatgctaattctcctcctctgcgctctttacatgcaggcaaggttaatcgaggaatcaagattgccgcaggtaatgctgatttcaattaaacatttaccaagataggctagtatggtaatccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgttttattcaaaaaatttgtgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaatgaatcaaatgatttgaaaagaacaaataattacttaaattttttgaataagacaaatagtcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaaaagagggagtatatgacatctcctgatctgttcttgtgattcaaccactgtcacaaccaggaaccgcagcggctgttgtatgtctcggtatacttggcgttggctccactgtgttgtatacccggaggaagaggaaaagatctgcatcctttgaaggtctcatccatggagggacgccattgccatcactcacgaaagaattcagcctcgccggcttggcatatacccacatcttcacctacgaggagctcgacgaggctaccgacggcttcagcgacgcccgggagctcggcgtcggcggcttcggcacagtgtacaaaggtacaagatcatacacaaagccagtgtcccattgtccatgtcggacttgatcagttgagagtaaaacattgacatgtcttgttacagggatactccggaatggggacacggtggcggtgaagcggctgtacaagaacagctacaagagcgtggagcaattccagaacgaggtgggcatcctgtcgcggctgcgccacccaaacctcgtcacgctcttcggctgcacgtcgcagaccaacagccgcgacctgctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctgcacggcggcgcggcggcgcggtcgtcctccctcgactggccgacgcggctcggcatcgccgtcgagacggccagcgcgctggagtacctccacacggtggagccgcaggtggtgcaccgcgacgtgaagacgaacaacatcctcctcgacgaagggttccacgtgaaggtggccgacttcggcctctcccggctgttcccggcggacgccacgcacgtgtccacggcgccgcagggcacgccggggtacctcgacccgatgtaccaccagtgctaccagctgacggacaagagcgacgtgtacagcttcggcgtggtgctcgtcgagctcatctcctccaagccggcggtggacatgaaccggcgcggcggcgacgtcaacctggccaacatggccgtgcacatgatccagagctacgagatggagcagctggtggacccgcagctcgggtacgcgtcggacggcgagacgaggaggacggtcgatctcgtcgccgaggtggcgttccggtgcttgcagccggagcaggacgtgaggccgccgatcggtgaggtgttggacgcgctgagagaagctcagcggatggacaaggtaggctacgtcaaggacgacgccgggctggtcaagaagagccgagacggctctccggactgcgtcatgtaccagtggattagcccatccaccacttccaataacagcagctgagacttgacaagatgttcagaaaatactggctactgactgcagacaccgtaaatattcagagttgtgtgctattgtttgtcagagaaagagaggtttcccatgaaaagaaaaaagacatagaggtttatgtgtctttggctgtaactgagttaacttgttggccagtggtttggctactttggcacattcagaaaagcagtttgatgatctgttagagaagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0136800, RefSeq:Os01g0136800