Os01g0138400

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0138400| Description = Protein kinase-like domain containing protein| Version = NM_001048505.1 GI:115434423 GeneID:4325681| Length = 4054 b...")
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Gene Name

Os01g0138400

Description

Protein kinase-like domain containing protein

Version

NM_001048505.1 GI:115434423 GeneID:4325681

Length

4054 bp

Definition

Oryza sativa Japonica Group Os01g0138400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2052583..2056636

Sequence Coding Region

2052599..2053358,2054813..2054848,2055047..2056268,2056381..2056414

Expression

GEO Profiles:Os01g0138400

Genome Context

<gbrowseImage1> name=NC_008394:2052583..2056636 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2052583..2056636 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacacgccattgctgctgctgcttcccttcctggcggcatgtctgctcgcgccgcggcacgcggcggaggcggccgtcacgagctgcgcgccgaggaggtgcgggaacgtgaccatcgcctacccgttctggctgccggactcatcgccgccgccgtcgtcgtcgtccgcgccgtgcggccccgcggcgttccaggtgaactgcgacaacggcagccgcgcgtcgctggcccgctccttccgcagcgggtacaagatcctcggcgtgtcgtacgccaaccgcaccgtcgtcgtcgccaacgacaacgtccagaccgacgccagcggctgcccggtgcccaagatcgacgtctccgccagcctcaccctcgcgccgttcaccgccagcccggccaacagccagctcgtcttcctcttcaactgcaccagcagcagcaggccgccgccggcagggttcgtcaacgtcacgtgcccgggagcgaaggccgtggtccggctcgacacgagctacaacaacaccgccgccagagtggtcgccggaggctgcgactacgcggccgttccggtggtcggcgtgccgggggcgagcccgacggactacccgcagctgctccggggaggctacatgctggagtggagggcgcccgccggcgactgcatggcgtgcaatgccagcggcggccagtgtggctacgacgccgacacggaggcgttcgcctgcatctgctccgacggctcatcgcgcccggggatatgtgatgcaaagaagtccgggaacaaggtcatcctgatagtgtcactgtcgatctgtgcgactgggttggtgctattggcatgcatcgccatcgtctacaagtgtcgccgacgtatgcaaaatcgtttcagttttctgaacgccatggacggtgcaagcagaacggatactgcaaaggtggagaagctgctgcagagttacggatccctagctccccggaggttcaggtactcggagctgaagaagataacgaagtccttcagccagcggctcggcgagggcggctacggcacggtgttcagcggcacgctcgccgacggccgcgccgtcgccgtcaagttcctccaccactccaagcccaacggcgaggagttcctcaacgaggtggtcagcattggccggacgagccatgtcaacatcgtctccctgctcggcttctgcctcgagggctccaagcgagccctcgtctacgagtacatgcccaatggctcgctggacaagtacatctactcgacgtcggcggcggcggcggcggaggcggaggaggcggaggcgacggcgagccctgacagggatgttctggggtggaaggtgctgcaggagatcgccgtcggcgtggcgcgggggctggagtacctgcacgacgggtgcaacacgcggatcatccacttcgacatcaagccgcacaacgtgctcctcgacgagggattccggcccaagatcgccgacttcgggatggcgaagctgtgcaacccaaaggagagcatcctgtcgatggcggacacgagggggacgatagggttcatcgcgccggaggtgttctcccgcgggttcggcgacatctcgaccaagtccgacgtgtacagctacgggatgctgctgctggagatggtcggcggcgggagcaacgtcaaggcctacgccgagaagggcgccagcggcacgttcttcccgctctgggtctacgaccacctgctcgaggacggcggcgtgctgcagagcgtcgccgccgccgccgccgccacggccggcggcggcgccggatcaccgggaggcgaggagatcgcgaggaagatggcgctgatcgggctgtggtgcatacagaccgtgccggcgaacaggccgtcgatgggcaaggtgctggagatgctggagagaagcgtccacgagctcgccatgccgccgcggccgtaccactcgaactcgtcgtccccgtcgcggccgtcgagctacccctcctctgcctcggatttcacgcagcgatcaaggttatcaacaccgggaagcacagcgtga</cdnaseq>

Protein Sequence

<aaseq>MDTPLLLLLPFLAACLLAPRHAAEAAVTSCAPRRCGNVTIAYPF WLPDSSPPPSSSSAPCGPAAFQVNCDNGSRASLARSFRSGYKILGVSYANRTVVVAND NVQTDASGCPVPKIDVSASLTLAPFTASPANSQLVFLFNCTSSSRPPPAGFVNVTCPG AKAVVRLDTSYNNTAARVVAGGCDYAAVPVVGVPGASPTDYPQLLRGGYMLEWRAPAG DCMACNASGGQCGYDADTEAFACICSDGSSRPGICDAKKSGNKVILIVSLSICATGLV LLACIAIVYKCRRRMQNRFSFLNAMDGASRTDTAKVEKLLQSYGSLAPRRFRYSELKK ITKSFSQRLGEGGYGTVFSGTLADGRAVAVKFLHHSKPNGEEFLNEVVSIGRTSHVNI VSLLGFCLEGSKRALVYEYMPNGSLDKYIYSTSAAAAAEAEEAEATASPDRDVLGWKV LQEIAVGVARGLEYLHDGCNTRIIHFDIKPHNVLLDEGFRPKIADFGMAKLCNPKESI LSMADTRGTIGFIAPEVFSRGFGDISTKSDVYSYGMLLLEMVGGGSNVKAYAEKGASG TFFPLWVYDHLLEDGGVLQSVAAAAAATAGGGAGSPGGEEIARKMALIGLWCIQTVPA NRPSMGKVLEMLERSVHELAMPPRPYHSNSSSPSRPSSYPSSASDFTQRSRLSTPGST A</aaseq>

Gene Sequence

<dnaseqindica>17..776#2231..2266#2465..3686#3799..3832#accaaccgtcgtcgcgatggacacgccattgctgctgctgcttcccttcctggcggcatgtctgctcgcgccgcggcacgcggcggaggcggccgtcacgagctgcgcgccgaggaggtgcgggaacgtgaccatcgcctacccgttctggctgccggactcatcgccgccgccgtcgtcgtcgtccgcgccgtgcggccccgcggcgttccaggtgaactgcgacaacggcagccgcgcgtcgctggcccgctccttccgcagcgggtacaagatcctcggcgtgtcgtacgccaaccgcaccgtcgtcgtcgccaacgacaacgtccagaccgacgccagcggctgcccggtgcccaagatcgacgtctccgccagcctcaccctcgcgccgttcaccgccagcccggccaacagccagctcgtcttcctcttcaactgcaccagcagcagcaggccgccgccggcagggttcgtcaacgtcacgtgcccgggagcgaaggccgtggtccggctcgacacgagctacaacaacaccgccgccagagtggtcgccggaggctgcgactacgcggccgttccggtggtcggcgtgccgggggcgagcccgacggactacccgcagctgctccggggaggctacatgctggagtggagggcgcccgccggcgactgcatggcgtgcaatgccagcggcggccagtgtggctacgacgccgacacggaggcgttcgcctgcatctgctccgacggctcatcgcgcccggggatatgtggtaagtgtaaatctatctgttctttgtgctaaattcgttcagtttttttccctgaatttgattattgggaaatacataactattactcaaattaaattagttagagacttgagagtattaaaattcaaattaactatttattgattgatcagcacaagcagtagttaggatcaacgaacatgtagtagtagttcgtatttgcgtggtcgtgccaaaaaccagggtggttagaactgacaaaaggaagtaagtagattaagctattttgacttttgaacgtgatttatatggagggtaacaatctaacaatggttgtcaatcggtgaccgttcacgttatccaaaattctttaaaatttcctaatgatgctccctttttctgatgagcaattttatggttcttgaagaggtaccatgaggtaccgaaaatttagtgtaaaatttggcacctcatagtatctaggtaccaagaggtactaaatttacaatacaaaaagtggtacctcatggtaccttctcaaggaccgtaaaattgctcttttttaataagaaaaaaaagtgtagattgtgattctggaactgaaaaaaaggtgatctctttatgcatgttttaattaggtgaagtgtactttcaggacaaggctcttgataggactagcaatagtggaagtacaatagaactggaatgactttttgcacgggcttggactaattaaattactgaatcaacatatggtggctgtcacgatctcatcgtatgaaacaatcttttgccgagaaccaataatggactccacataagccccagtgtgatctgtgaagctatactttagctacaagtagccggaatttcacgttctccgatctcagcaacgtttacatgtagaatacgtatacagccagcacgtgtggttggttagttgttagtgcttacttatcgactttgactttgaaatcacaatgataggagcaaaatggtcaactaaaactaacttttgtgtccgaaaagagacgattttgtttgatttcatctgattattttgatcattttgttcatcatgtctgaatcaaacgagatatgttgctgctcgcggcggctgttgctgcactctcctgtagctggttaggtcagatacatgttggtctctgtccactgtacaaatacttcgaataaagcaacgtcgtacatatgtacaaatttacgatgatatctgttgtctgaattgttcctaagtaatagttcagacaccttaattggtccaaccagtttcaattagtcatcaggaaatcaatgacgcaactgtgtgtggaacaattagtctttgatcaggaactgtttctttgattaatctcggaaataaattaatgctcgttcaatgtatttcaattggttggaatagactggcgatattttgtacatatgttgactaaaatgaaatgattcttccctttcagatgcaaagaagtccgggaacaaggtcatcctgataggtatgcatccgcttcagtcttcaattcttgcttaactaatccaacaaaataatataattcaacttgtttttattcttcgtatatgtcatgatgatcaattgtttcttcaataatgatgtcatgatcaattatctagataaatttaccacttggtagtaattactaatctatactaattgtttgcttcgtcgctttcagtgtcactgtcgatctgtgcgactgggttggtgctattggcatgcatcgccatcgtctacaagtgtcgccgacgtatgcaaaatcgtttcagttttctgaacgccatggacggtgcaagcagaacggatactgcaaaggtggagaagctgctgcagagttacggatccctagctccccggaggttcaggtactcggagctgaagaagataacgaagtccttcagccagcggctcggcgagggcggctacggcacggtgttcagcggcacgctcgccgacggccgcgccgtcgccgtcaagttcctccaccactccaagcccaacggcgaggagttcctcaacgaggtggtcagcattggccggacgagccatgtcaacatcgtctccctgctcggcttctgcctcgagggctccaagcgagccctcgtctacgagtacatgcccaatggctcgctggacaagtacatctactcgacgtcggcggcggcggcggcggaggcggaggaggcggaggcgacggcgagccctgacagggatgttctggggtggaaggtgctgcaggagatcgccgtcggcgtggcgcgggggctggagtacctgcacgacgggtgcaacacgcggatcatccacttcgacatcaagccgcacaacgtgctcctcgacgagggattccggcccaagatcgccgacttcgggatggcgaagctgtgcaacccaaaggagagcatcctgtcgatggcggacacgagggggacgatagggttcatcgcgccggaggtgttctcccgcgggttcggcgacatctcgaccaagtccgacgtgtacagctacgggatgctgctgctggagatggtcggcggcgggagcaacgtcaaggcctacgccgagaagggcgccagcggcacgttcttcccgctctgggtctacgaccacctgctcgaggacggcggcgtgctgcagagcgtcgccgccgccgccgccgccacggccggcggcggcgccggatcaccgggaggcgaggagatcgcgaggaagatggcgctgatcgggctgtggtgcatacagaccgtgccggcgaacaggccgtcgatgggcaaggtgctggagatgctggagagaagcgtccacgagctcgccatgccgccgcggccgtaccactcgaactcgtcgtccccgtcgcggccgtcgagctacccctcctctgcctcggatttcacgcagcggtcagtgtcgtgttgatcagttgctgatcactctgttttttttttttctgataacgctgaattccatatgatcaatcgctgacgaagatcgatatgcgtttttgtcgagcagatcaaggttatcaacaccgggaagcacagcgtgaaaagtggcgatggaatgactatacttgaagcagacaactggctagtagactgtaaattaaagaaaaccagagtgggagctttggttttgtatgtagagcagattagcaagaacaacaaaattagacgttattactgtttgaatcattaattcgttctcttatggttttctgtggaaatcatgtactactcctattcagttttagtttaacttgtgcttgacg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0138400, RefSeq:Os01g0138400