Os01g0138500

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0138500| Description = Protein of unknown function DUF789 family protein| Version = NM_001048506.1 GI:115434425 GeneID:4325682| Length = 29...")
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Gene Name

Os01g0138500

Description

Protein of unknown function DUF789 family protein

Version

NM_001048506.1 GI:115434425 GeneID:4325682

Length

2918 bp

Definition

Oryza sativa Japonica Group Os01g0138500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2058309..2061226

Sequence Coding Region

2058443..2058565,2058870..2059087,2059962..2060206,2060301..2060388,2060499..2060590
,2060697..2060938

Expression

GEO Profiles:Os01g0138500

Genome Context

<gbrowseImage1> name=NC_008394:2058309..2061226 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2058309..2061226 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaattgtggccggaggtttgccgccgccggcgctccggcgacggcgagacggtgtaatctggagctgttcctcgaggccaccacgccggttgtcccgacgacagcctgctcctccaagaagagcatgaatggttggaagcaatctgatgaagaaaatgcgctgccattcttcagtttgggcgacctctgggatgggttcagagagagcagcgcatatggtatcgctgtgccaattgttctgaatggttgcagtgacggtgtggtgcagtattacgtcccttacttatctgcaatccagctttatggaagattaaggaggcatttctaccattccaggccaagtggagaagacagcgacggcgactactgtcaagacacaggcagtgaagagatgagcgaccttgagcacgactcatgtccaagcagcacggatgcgttctcagtccaagataccacctgcgaaacctccaccagcgaagcatcgagcgacgaaagcgaatcaacgagaatttcccacgagcagctcatcttcgagtttctggaatccgagcctccctaccagcgtgaaccgctagctgacaagatttgtagtcttgccaggggatttccggagctgaatactctcaggagctgtgatttgtcgccaaccagttggatgtccgtcgcatggtatccaatataccgaattccgacgggaccaacactatgcgatctggacgcctgcttcctcacatatcatcccctctccacgcagctcacaggcggcatctgcccggagccaaaaggcaacaacagcggcgtccccgtgacgacggcgatgtgcctcccgacgttcgccatggcgtcgtacagactcaaggtcgcggcgtgggcaccgggcgggcgagacaggcagctggtcgcctccctctcgcacgccgccgacgcctggctcggcctcctcggagttcaccacccggatcaccgcttcttcgccgctcgccgcgtcgtgtccagaagatga</cdnaseq>

Protein Sequence

<aaseq>MANCGRRFAAAGAPATARRCNLELFLEATTPVVPTTACSSKKSM NGWKQSDEENALPFFSLGDLWDGFRESSAYGIAVPIVLNGCSDGVVQYYVPYLSAIQL YGRLRRHFYHSRPSGEDSDGDYCQDTGSEEMSDLEHDSCPSSTDAFSVQDTTCETSTS EASSDESESTRISHEQLIFEFLESEPPYQREPLADKICSLARGFPELNTLRSCDLSPT SWMSVAWYPIYRIPTGPTLCDLDACFLTYHPLSTQLTGGICPEPKGNNSGVPVTTAMC LPTFAMASYRLKVAAWAPGGRDRQLVASLSHAADAWLGLLGVHHPDHRFFAARRVVSR R</aaseq>

Gene Sequence

<dnaseqindica>135..257#562..779#1654..1898#1993..2080#2191..2282#2389..2630#atggtcttctcaattaaactccactaaacctccctatggcctatgccatccaccaaacaagcaactgaatcggaatcgcgtattgctttcgagctccaattcaacagattagcagaacacagggcgctgagctgatggcgaattgtggccggaggtttgccgccgccggcgctccggcgacggcgagacggtgtaatctggagctgttcctcgaggccaccacgccggttgtcccgacgacagcctgctcctccaaggtgatacgcttttcatcccatgcatcgatctgttgcatttcctgatttcccccatttctgaattctgatactactatccaagatgatctttcaagagtattagttgcctcactgctaatacggaattatgtatgttccaaaacagatgttgttttttttttcatttttgtttctataactcaatttctgactaagaagaaacagaaaacaactgccttaattcatttcggtaacaatttctgactaagtagaggttcttttcagcttctgtgacatgaaaaaattcgtatggttatctttgcagaagagcatgaatggttggaagcaatctgatgaagaaaatgcgctgccattcttcagtttgggcgacctctgggatgggttcagagagagcagcgcatatggtatcgctgtgccaattgttctgaatggttgcagtgacggtgtggtgcagtattacgtcccttacttatctgcaatccagctttatggaagattaaggaggcatttctaccattccaggtaatacatcctcaaatcaccgttgaatcacttcttgtagatgttcttaagacaaatggtttattagctatggtggcattgtgttcatagttacttcagcacaatgctcaaccttagaaatagaacaacacttcaggttgtaatgtagttcataattacagaattacagaacaagtacatttgccaatacattccttgagaagtactcctacattttgcgtctcctatgagaggacaggaaaataaaatgaattttaggtgcttaagtgaccattgcatcaggagaaaggaacataaagaattctcaaaaaaaagagagaggaacataaagacaaaacaagtcttgtaaagccatctgaactctgaagagtgagtttgcgagcattgacttaaagtgtcagggccaatcagtattcagtagtacgagttactataggtccctatctctgtttctacacttctccattgaggctgcactatcttcagtaacaatttggatttctcatacgcaaagttcgtatcctgaatgcacttaagaaacttcattaggaaggcaaaacccatagtgattacaatacgtctccaattcatcgtatacaaatcacaaatgtaatccaaggagcggttactgttagtatatgcaattttgttcccactggatccaaggcaaccgttggatggaggcgcgcgtgcggctacgattcaagctgacgcagtcacgcaactgctgggagcaccgtacgggtacagataactaacagaaacagataggagagtaggagagagggttaacctgaggatcactaaaacggaatcagcttatgttaatccctagtgttgtttctgatatggtgtttgttcaatccaatcgtaggccaagtggagaagacagcgacggcgactactgtcaagacacaggcagtgaagagatgagcgaccttgagcacgactcatgtccaagcagcacggatgcgttctcagtccaagataccacctgcgaaacctccaccagcgaagcatcgagcgacgaaagcgaatcaacgagaatttcccacgagcagctcatcttcgagtttctggaatccgagcctccctaccagcgtgaaccgctagctgacaaggcatgccaacaattactccaagaactcttatcgtttctccctgatgaaaatgactgtgtttttgtcactcctctgaatcaaaaaactcgtgcagatttgtagtcttgccaggggatttccggagctgaatactctcaggagctgtgatttgtcgccaaccagttggatgtccgtcgcatggtactagcagaatactgtccttgtgttgaataatgtttaccattcagagttcagactaactggagtaaaatatttgactctgaattcttcgttcctgatgatcgctgcaggtatccaatataccgaattccgacgggaccaacactatgcgatctggacgcctgcttcctcacatatcatcccctctccacgcagctcacaggtgcacaaacacttcacagaaaaaacaccgaacaactggaccatctttccttgggttgctgtacgctttgagcctgtgacacatgacgttgaaactgatctttcaggcggcatctgcccggagccaaaaggcaacaacagcggcgtccccgtgacgacggcgatgtgcctcccgacgttcgccatggcgtcgtacagactcaaggtcgcggcgtgggcaccgggcgggcgagacaggcagctggtcgcctccctctcgcacgccgccgacgcctggctcggcctcctcggagttcaccacccggatcaccgcttcttcgccgctcgccgcgtcgtgtccagaagatgatgagtcgatggagatcgcctgccaacctgagagtgcagagaagttctctgtgttctttttttttttttttgtgtgtctcattcagttcgtatattgtcagggttcagactgtactcggatagttggatcacaaagcgtgcatcctgtttttgttttccagtaatggtttcagagaaagattaaccaagaatgtatatagaattagaagacaattaaaaatgtgttttcttttatgccagctggtctagtgtttatgtttaaacgtgatattttgttgtaccaaaactc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0138500, RefSeq:Os01g0138500