Os01g0138600

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0138600| Description = contains InterPro domain(s): IPR008731| Version = NM_001048507.1 GI:115434427 GeneID:4325683| Length = 2381 bp| Def...")
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Gene Name

Os01g0138600

Description

contains InterPro domain(s): IPR008731

Version

NM_001048507.1 GI:115434427 GeneID:4325683

Length

2381 bp

Definition

Oryza sativa Japonica Group Os01g0138600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2062615..2064995

Sequence Coding Region

2063697..2063735,2063844..2064076,2064306..2064367,2064500..2064557,2064709..2064775
,2064881..2064928

Expression

GEO Profiles:Os01g0138600

Genome Context

<gbrowseImage1> name=NC_008394:2062615..2064995 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2062615..2064995 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagctcaacgccaagctctacgacaagtacaccgccctcaagaagcggaagctgctcgacgaggggctggaccagaagcgggctgccgacatcaaggagctccagcaagccatgaaagattgggtcgccgacctccagggcgagaacgagcgcctcattgccaagctgacccaaaaggagcagcagcttgtggaggtccagacacttttgctcgatgagactaggaagacaaaggagctcaatagtgaaatattgaagcttcagtgtctcctggctgagaagaatgatgcaaaccatatagctacagggtctcctgacacaaccgctgaaatgattatagaaaatcaaactccaattccacctgcaaagaagacaccaaagtcaaagagcagggagagaaatatccacttcattgaaaaagcgactgttccttgtaatggctttcaggaggaaggaagagatcttgattcctgtagaaggcatatgagcatctcaggttag</cdnaseq>

Protein Sequence

<aaseq>MEQLNAKLYDKYTALKKRKLLDEGLDQKRAADIKELQQAMKDWV ADLQGENERLIAKLTQKEQQLVEVQTLLLDETRKTKELNSEILKLQCLLAEKNDANHI ATGSPDTTAEMIIENQTPIPPAKKTPKSKSRERNIHFIEKATVPCNGFQEEGRDLDSC RRHMSISG</aaseq>

Gene Sequence

<dnaseqindica>1261..1299#920..1152#629..690#439..496#221..287#68..115#gtcgtcgacccttcgtcgagccgccgccgccgccgccgatccttctcctcccacctcgcccgcgccgatggagcagctcaacgccaagctctacgacaagtacaccgccctcaaggtatacataccgcctcgtctcttcccccattctgtaaccctacccatggacacggatttgatttcttctcaatacgtttcgcactgccgctcttgatgcgcgtagaagcggaagctgctcgacgaggggctggaccagaagcgggctgccgacatcaaggagctccagcaaggtaaaccgaggaggcggatgtatttcgtcggtttttcgaagggaggagggtttaagacctgggagggagagaaatgcacatcttttggaattgggaggaatttctgttaggttgttgacttcgctccgttttgttgtttctgatgatgcagccatgaaagattgggtcgccgacctccagggcgagaacgagcgcctcattgccaagctgtaagattcaaatgctgctcctgcggcgatagggtttcacgcgttcgtgctgttttgggcttccgctgtttcggggaaatgatgcctgatccgttgctttctcttcttttgttaatttcttgatgatgccaggacccaaaaggagcagcagcttgtggaggtccagacacttttgctcgatgagactaggaagagtaagaattctttttgctaagattataattttataaggaaatggttggtagtatgcaagtataaagtataaaccatgattgggtggaggtggaactgatgtgcgtctttggaaatggagggaaacaatctgttgctgattgaaagcactatttggtctgagttctgtcttccatttactttggtattaatgaagttgacttaattcaattttgtttacaaaacatgcagcaaaggagctcaatagtgaaatattgaagcttcagtgtctcctggctgagaagaatgatgcaaaccatatagctacagggtctcctgacacaaccgctgaaatgattatagaaaatcaaactccaattccacctgcaaagaagacaccaaagtcaaagagcagggagagaaatatccacttcattgaaaaagcgactgttccttgtaatggctttcaggaggaaggaagagatgtaagttttccgtaacaggaactacttattagtgaagtacaagtatgcaatagaatgagtgtgttgagctcttctaatttctgtttatgatttggattggttttgtagcttgattcctgtagaaggcatatgagcatctcaggttagtggtaatatacacacatgcagtagtgaattgtttgaacttaaaagtatgttgtttgcagggagtgcgacagaagaaagctccagtacctgtatgtttcatatgctggctgaatcagtagttgggatgaaattttcagtgaagaaccaaacagaaggattttcactttcagtctcccatgaagctagtggtatttggaacatcaaattttatgctattattttagccacagcatagtactggaatatctcatcatagttattattcatcatgttttacttgtgttcatttctctttcacattcatttgattttgcatatagccacctccatgtttgccaagctagctgagtattcaagcaaacagttatgcaaagaacaatcttcaacctgaaaaatgtcctttaaaccaccagaagagttgtgtgaatacatattttaatgctttaatatctttgtcaagcatgtacacatctctttggagcttagccgtttgtagcagaacttgtataccagcatacagtgtagttacatgttgggtgcagaacctgaggatcatgtcaccaatgttagaacatttgatttgtaaagatcataatcaagtgtaaggaacgaattacatttctaactgaattttttaaactgttgtaggctacagtttcaccctgacatgggtagaccaacctggtggcggtgaatggtcatatcagtactcgtcgttgggcaccctggacaggattgctatgggctggatgaaggaggacataaaattcagcagggccatgtgtcctgtattctttcagcagatatcgcgcatcctcagacaaggctaagctcaactgggaagcttagtttggattttagaggtcctgacttttgctagacagtggactgaaactgacttgttttaggagtgacacgaggctttatgtatcctttcgtttggcctttgttgttcctgttgtgaacataacaattagcaagtgattcgagatgttggtcgcctggttgccgtatgtctttatgtatagcccctgatttgaactctgatggttctgaaaataagagcttcgacattgctgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0138600, RefSeq:Os01g0138600