Os01g0139000

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0139000| Description = Reticulon family protein| Version = NM_001048510.1 GI:115434433 GeneID:4325472| Length = 1192 bp| Definition = Oryz...")
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Gene Name

Os01g0139000

Description

Reticulon family protein

Version

NM_001048510.1 GI:115434433 GeneID:4325472

Length

1192 bp

Definition

Oryza sativa Japonica Group Os01g0139000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2079112..2080303

Sequence Coding Region

2079112..2079196,2079334..2079514,2079712..2079853,2079934..2080003,2080140..2080303

Expression

GEO Profiles:Os01g0139000

Genome Context

<gbrowseImage1> name=NC_008394:2079112..2080303 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2079112..2080303 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctataactgtacgaactcacaggacaaccaagctcttcggcagggaaaggccactgcatgacgccctaggtggacacaaagctgcagacatcatcctgtggagggagaggagggtgtcggcgtccatcgtcgccggagcgacggtggcatggtatctgttcgaggtggcggagtaccatttcctgtcgctggcatgctacctcgccatgctcggcatgctcgtcgtcttcatatgggccaatgcttctgctttcttcaacctgccggctccaagaatccctgaaatttttgtgtcggagagaaccaccaggcaagtgatcctggccttgcacagcaggctaacttggttcgtgcacaggctctacgacattgcttgtggaaaggacatcaaaatgttcatcttgacggtgttctccctgttcatagcgtcagtgatcgcaagctgcttcagctccctgactctcctgtacctagttgtgctaggcaccatgacgctgcctgtgatgtacgagaattacgagagcgaggtcgaccacctggtgtcgacggcggtgcacgatctccggagccacgtcggcgacatcgattctggtgttttcaagaagatcccaagagggagaggagccactgcaaattga</cdnaseq>

Protein Sequence

<aaseq>MAITVRTHRTTKLFGRERPLHDALGGHKAADIILWRERRVSASI VAGATVAWYLFEVAEYHFLSLACYLAMLGMLVVFIWANASAFFNLPAPRIPEIFVSER TTRQVILALHSRLTWFVHRLYDIACGKDIKMFILTVFSLFIASVIASCFSSLTLLYLV VLGTMTLPVMYENYESEVDHLVSTAVHDLRSHVGDIDSGVFKKIPRGRGATAN</aaseq>

Gene Sequence

<dnaseqindica>1..85#223..403#601..742#823..892#1029..1192#atggctataactgtacgaactcacaggacaaccaagctcttcggcagggaaaggccactgcatgacgccctaggtggacacaaaggtgactaattttgataattctgatcagttcttgcgagctagtacattattcatggatttgcttaaacgagctcattgcaatcgatgtgaatcactcgaagtgtatctgttctgaatttgcattggtgatgaatgcagctgcagacatcatcctgtggagggagaggagggtgtcggcgtccatcgtcgccggagcgacggtggcatggtatctgttcgaggtggcggagtaccatttcctgtcgctggcatgctacctcgccatgctcggcatgctcgtcgtcttcatatgggccaatgcttctgctttcttcaacctgtaagccactcactcttcctccctctctctgttcttccattttatctgaaaatctgggcctcatcaaggataaagcccatttaatttacacaaagcacggccatttgatactaccaaattagcccaagatttcgtttttcatgggctgtatcgttctcaatcctggaaagttctaagttttgagatggtaactgcaggccggctccaagaatccctgaaatttttgtgtcggagagaaccaccaggcaagtgatcctggccttgcacagcaggctaacttggttcgtgcacaggctctacgacattgcttgtggaaaggacatcaaaatgttcatcttggtgagtgtctgctactgcacacaaagattgatacttcctgtatcaatatgatacgttatctgctcctgtgcatgtttcagacggtgttctccctgttcatagcgtcagtgatcgcaagctgcttcagctccctgactctcctgtacctaggtaactgatacccatttcttcagaaactcccagttaattcttcagagaactccatttctgattgatctcttgatcatgcgtcagagatatataagctcatggtagttttctgatcatggctgtgttctgttcgcagttgtgctaggcaccatgacgctgcctgtgatgtacgagaattacgagagcgaggtcgaccacctggtgtcgacggcggtgcacgatctccggagccacgtcggcgacatcgattctggtgttttcaagaagatcccaagagggagaggagccactgcaaattga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0139000, RefSeq:Os01g0139000