Os01g0139200

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0139200| Description = Octicosapeptide/Phox/Bem1p domain containing protein| Version = NM_001048511.1 GI:115434435 GeneID:4325473| Length =...")
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Gene Name

Os01g0139200

Description

Octicosapeptide/Phox/Bem1p domain containing protein

Version

NM_001048511.1 GI:115434435 GeneID:4325473

Length

2714 bp

Definition

Oryza sativa Japonica Group Os01g0139200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2083490..2086203

Sequence Coding Region

2083973..2084816,2084922..2086093

Expression

GEO Profiles:Os01g0139200

Genome Context

<gbrowseImage1> name=NC_008394:2083490..2086203 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2083490..2086203 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactcggtgccggccgccggagtcggcgtcggcggcggcggcgcgggcgcgggctacccggagtccacggagtcatccccacgcagccggggcggcgactcgtgggacgagcccttcccttcctccgccgcggcggcggccgcggctgccgggggagggaggctccgcctcatgtgcagcttcggcgggcggatcgtgccgcgccccacggacaagtcgctgtgctacctcggcggggagacccggatcgtggccgtcgagcggaacgcctcgctggccgacgtccacgcgcggctctcccgctcgctcctcggcggccagccgtttactctcaagtaccagctccccaacgaggacctcgactcgctcatctcggtctccaccgacgaggacctcgataacctcgtcgacgagtacgaccgcatcgccgccacctcctccggcggcggctcctcccgcacgtcgcggatccgcctcttcctcttcccggccaagcccgagtcatcctcctccctcggctccctcctcgacgactcctccaagtccgagtcatggttcgtcgacgccctcaacagcgccatctccggctccctcgacggcatcccgcgcgggatctccaccgactccgcctcagtcaactgcctcctcggcctcgaggacgactcctccacgcactcccgcggcggcccgcctaactcttctcccgccgaggaacagcgcgccaaccagcagaagctcgccgcggccgcggccgttgctgcggcgaggcacccgcacgacgtgcagtccgtgccggactcgccgatgattgacaagaactcctcgttcggatcaacgtcctctgcgccatcgctgtcgaatctaccgccgatacgggtgcggcccgaggatcgcccgccggatagccgactcgccccgcaggttcccgttgaggatcacttcgcccagatggggatctccgatcagccggtgcagcctgtaattgggggatacatgcagccgccgccacaggtgccgatccccaacatggctgtccccagcatctccccctcggatgcgtccagccgagtgttctccgacgatgacaagtccgatcacggcggcggcggaggtcggaagccgcagccacccaagccggaggttccacctgtcgctgaccccaccaacagagccatgtactacaacgatagatcgcctcctgctgaattgaagcgtgacatgccggttggaactgatgctgccagctatcgtgtgcctgtgccagcccaagatgctgctgccgccgccgccgctgcggctgctgctgcccagcaacccccagctgggtatgtgtatgcacagatgcatgcgccgccaccgcagcagcaacccccaccaccacagcagcaacagccagtcccacagcaatatgtcactgcacaaaatcagcatttcattcacaatccagctactggcacattcatcccaatccaatcctattaccaccatccggtccctcagcaagcaccacagccgcccatgccgcagcctgtgccacagccacaacaatcacacgctttcgacccaaatactggcatgtattacattcccatgcgcacgaatgcgcctcaggcatatagcatgcctcctggtgccgctgctgtgccgcctcccacccttgttgacactacaccaaaaccaaccgtgccaattcctcagatggccgtgaagcagcctgaactgcagcaacctggtttgtaccgaactaccgcagcacctacccctgtaccagcgtctaatgctcctgcgtatgctgggatgggctaccaccatgttattcaaacacaccatcatccagcgccacagcctgcagcgactgtggcaggcaattttggatatgactatggtgatcccacgcgagcacaggtcttctactcgcaggcagcggcaccaccaacattgccacctcagtatcagcccatgggctcgcccgatgctggccaggctgacctgaaacaggcccgggcttcatag</cdnaseq>

Protein Sequence

<aaseq>MDSVPAAGVGVGGGGAGAGYPESTESSPRSRGGDSWDEPFPSSA AAAAAAAGGGRLRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSR SLLGGQPFTLKYQLPNEDLDSLISVSTDEDLDNLVDEYDRIAATSSGGGSSRTSRIRL FLFPAKPESSSSLGSLLDDSSKSESWFVDALNSAISGSLDGIPRGISTDSASVNCLLG LEDDSSTHSRGGPPNSSPAEEQRANQQKLAAAAAVAAARHPHDVQSVPDSPMIDKNSS FGSTSSAPSLSNLPPIRVRPEDRPPDSRLAPQVPVEDHFAQMGISDQPVQPVIGGYMQ PPPQVPIPNMAVPSISPSDASSRVFSDDDKSDHGGGGGRKPQPPKPEVPPVADPTNRA MYYNDRSPPAELKRDMPVGTDAASYRVPVPAQDAAAAAAAAAAAAQQPPAGYVYAQMH APPPQQQPPPPQQQQPVPQQYVTAQNQHFIHNPATGTFIPIQSYYHHPVPQQAPQPPM PQPVPQPQQSHAFDPNTGMYYIPMRTNAPQAYSMPPGAAAVPPPTLVDTTPKPTVPIP QMAVKQPELQQPGLYRTTAAPTPVPASNAPAYAGMGYHHVIQTHHHPAPQPAATVAGN FGYDYGDPTRAQVFYSQAAAPPTLPPQYQPMGSPDAGQADLKQARAS</aaseq>

Gene Sequence

<dnaseqindica>1388..2231#111..1282#atattccccgtccactccgccaaaagcccctcttccgatcttcttcttcttcccccaaaaatctaattaaaatcccctcccccaaaaacccctctcacccgaatttcctcatggactcggtgccggccgccggagtcggcgtcggcggcggcggcgcgggcgcgggctacccggagtccacggagtcatccccacgcagccggggcggcgactcgtgggacgagcccttcccttcctccgccgcggcggcggccgcggctgccgggggagggaggctccgcctcatgtgcagcttcggcgggcggatcgtgccgcgccccacggacaagtcgctgtgctacctcggcggggagacccggatcgtggccgtcgagcggaacgcctcgctggccgacgtccacgcgcggctctcccgctcgctcctcggcggccagccgtttactctcaagtaccagctccccaacgaggacctcgactcgctcatctcggtctccaccgacgaggacctcgataacctcgtcgacgagtacgaccgcatcgccgccacctcctccggcggcggctcctcccgcacgtcgcggatccgcctcttcctcttcccggccaagcccgagtcatcctcctccctcggctccctcctcgacgactcctccaagtccgagtcatggttcgtcgacgccctcaacagcgccatctccggctccctcgacggcatcccgcgcgggatctccaccgactccgcctcagtcaactgcctcctcggcctcgaggacgactcctccacgcactcccgcggcggcccgcctaactcttctcccgccgaggaacagcgcgccaaccagcagaagctcgccgcggccgcggccgttgctgcggcgaggcacccgcacgacgtgcagtccgtgccggactcgccgatgattgacaagaactcctcgttcggatcaacgtcctctgcgccatcgctgtcgaatctaccgccgatacgggtgcggcccgaggatcgcccgccggatagccgactcgccccgcaggttcccgttgaggatcacttcgcccagatggggatctccgatcagccggtgcagcctgtaattgggggatacatgcagccgccgccacaggtgccgatccccaacatggctgtccccagcatctccccctcggatgcgtccagccgagtgttctccgacgatgacaagtccgatcacggcggcggcggaggtcggaagccgcagccacccaagccggaggttccacctgtcgctgaccccaccaacaggtaagccatttgtttttcgattcttatactggattagtaatatgcttggattggctgtatggaaggaaaccttatgctggctatgtgttcgatcaaatgtttcagagccatgtactacaacgatagatcgcctcctgctgaattgaagcgtgacatgccggttggaactgatgctgccagctatcgtgtgcctgtgccagcccaagatgctgctgccgccgccgccgctgcggctgctgctgcccagcaacccccagctgggtatgtgtatgcacagatgcatgcgccgccaccgcagcagcaacccccaccaccacagcagcaacagccagtcccacagcaatatgtcactgcacaaaatcagcatttcattcacaatccagctactggcacattcatcccaatccaatcctattaccaccatccggtccctcagcaagcaccacagccgcccatgccgcagcctgtgccacagccacaacaatcacacgctttcgacccaaatactggcatgtattacattcccatgcgcacgaatgcgcctcaggcatatagcatgcctcctggtgccgctgctgtgccgcctcccacccttgttgacactacaccaaaaccaaccgtgccaattcctcagatggccgtgaagcagcctgaactgcagcaacctggtttgtaccgaactaccgcagcacctacccctgtaccagcgtctaatgctcctgcgtatgctgggatgggctaccaccatgttattcaaacacaccatcatccagcgccacagcctgcagcgactgtggcaggcaattttggatatgactatggtgatcccacgcgagcacaggtcttctactcgcaggcagcggcaccaccaacattgccacctcagtatcagcccatgggctcgcccgatgctggccaggctgacctgaaacaggcccgggcttcatagctcaaggatttgtgaactctggtatgttgagaatcctagaagtgtagttatcctgccgttaattatcactattgttattacatgttacatgagtcagttggcaaccagtggatggatgatggcattaggcagctgtgcatttgggatcaaaataagatgaaaatgggatggtagttcttgtgttgggtgaaactcaagagggtgtttgtgattggttctggagatgccaatcgccaatgctggagcaagtggcggggagtggcttccaattccaattgccgtcttcttattttttaaaaaaataaatatatagtgtctaaagaactcggtacaaattctgaatcaagaactcatcatttgtgtagccctttgtatatttgaacctggaagttattgaggttgaaatgtcagataaaagtgtcattactttgcttgtagaaacttcatttgagttaaatatcatatatatacatcattcctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0139200, RefSeq:Os01g0139200