Os01g0141900

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0141900| Description = Conserved hypothetical protein| Version = NM_001048522.1 GI:115434457 GeneID:4325484| Length = 4730 bp| Definition ...")
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Gene Name

Os01g0141900

Description

Conserved hypothetical protein

Version

NM_001048522.1 GI:115434457 GeneID:4325484

Length

4730 bp

Definition

Oryza sativa Japonica Group Os01g0141900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2260501..2265230

Sequence Coding Region

2260731..2260989,2261111..2261216,2262746..2262857,2263296..2264396,2264483..2264725

Expression

GEO Profiles:Os01g0141900

Genome Context

<gbrowseImage1> name=NC_008394:2260501..2265230 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2260501..2265230 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatcgggtggccatggctgcggcggcggcgggggacggcggcgacgggagggggcggacgctgggggcggtcatcaaggagaaggacgaggagctggccctcttcctcgagatgcgccgccgcgagaaggagcgcggcgctgctgccgctgccgcggcggccgagcagctgctgctttccggggaccgcgtcgacgtggcgcgggatgggatgcttctcgtcgaccaaccgccgccgcgcccgcagcctcccgccgagcacaaggcggcggcgtacaggatgaccggcgggttcaggagagcgcccggcggcgccgacgacttcctcaattcggacggcggcgacaagaacgattacgactggcttctgactccaccaggaactccactttttccatctctagaagagtcaaaaaagtccccagtgagccaaactggaaccccaaagactcgcccaactgccttaaaatcaaggttggccaatcatccagatcctccatcaagaacaacccttccattgagagcaacatcatcaaacaacttgaactcagctgccacaacacgtaggccgtcatcttctggagggcacacatctaattcatcaaggccttcaacaccaactgggcggcctgcactgaccaatacctccaaaggttcaagaccttcaacccccacatctcgggcaactgtaccttctaagtctggacctcctgccccaagatcatcaactcccacttccaggtcaacacttacttcagcaaggtcaacaacaccttcaagaacatctggccctgctaccaggacatcaattccttcaggtagagcatcagcaccagctagcaggtcatccacacctacttcaagatcatcgatacctgctaccaggtcatccacgccatcatccaggccctccataccagcacaaagcaagccagtatcaaggtcatcaaccccaacaagacggccttctgccacttccacccaacatggtagcttggctgcaccagttcgatctacctcaatctccaaaccagcccctacaatgtccaaaagttcttcaccggcaaaaactatagcgtcaacaccttcaaggggcagctcacctactgtcaaatcgagaccatggaagccatctgaaatgcctggcttctcacttgacgctcctccaaatctgaggacatcactaccagaaagaccaacctctgctactcgtggcagacctggagctcctagttctaggtcttcctctgtggagcctgggccagctgctcggccaagacggcagtcttgctctccttctagagggaggactttaaatggtagtgtgccttcaggtagttcggtgccagcagtgagaagatcacatcttaatagtggtgacagtgtcaatcctgttcaaatgggtaataagatggttgagagggtagtgaacatgagaaggctagttcctccaaaacatgatgaccaaagatccagcctcaacggtctatctggaaaatcatcaaactctccagatagctctggcttcggtaggacattgtcaaaaaagtcacttgacatggctcttcgacatatggacatacggcgcagcattccaaacaatttacggcctcttatgacaagcataccagcatcctctgtgcatagcgcacggtcagggtctacaaggagcagaccaattagtgtttcagactctcctcttgcaacaagcagcaatgccagttctgagccgagcgtcaacaacaacctgatgtgcttggacagcatcgaaatcgatgatgagttgtgcagtgatagggcaggacaatacaggcgatga</cdnaseq>

Protein Sequence

<aaseq>MHRVAMAAAAAGDGGDGRGRTLGAVIKEKDEELALFLEMRRREK ERGAAAAAAAAEQLLLSGDRVDVARDGMLLVDQPPPRPQPPAEHKAAAYRMTGGFRRA PGGADDFLNSDGGDKNDYDWLLTPPGTPLFPSLEESKKSPVSQTGTPKTRPTALKSRL ANHPDPPSRTTLPLRATSSNNLNSAATTRRPSSSGGHTSNSSRPSTPTGRPALTNTSK GSRPSTPTSRATVPSKSGPPAPRSSTPTSRSTLTSARSTTPSRTSGPATRTSIPSGRA SAPASRSSTPTSRSSIPATRSSTPSSRPSIPAQSKPVSRSSTPTRRPSATSTQHGSLA APVRSTSISKPAPTMSKSSSPAKTIASTPSRGSSPTVKSRPWKPSEMPGFSLDAPPNL RTSLPERPTSATRGRPGAPSSRSSSVEPGPAARPRRQSCSPSRGRTLNGSVPSGSSVP AVRRSHLNSGDSVNPVQMGNKMVERVVNMRRLVPPKHDDQRSSLNGLSGKSSNSPDSS GFGRTLSKKSLDMALRHMDIRRSIPNNLRPLMTSIPASSVHSARSGSTRSRPISVSDS PLATSSNASSEPSVNNNLMCLDSIEIDDELCSDRAGQYRR</aaseq>

Gene Sequence

<dnaseqindica>231..489#611..716#2246..2357#2796..3896#3983..4225#atcttcatcctcagctcagctcagctcagctcaagctcaaaagccttttttgtttgttcgctgctgccactgtccccatcctcctctcctcgctgccgtttgcttcactcccactgctcctcctccacgcgcgcgcgcgcgggggctagatctcgccggaaccctagccggtaatgccacgggcggctgccgcggcgggacagtgaggtgttgagggggtttccggatcgatgcatcgggtggccatggctgcggcggcggcgggggacggcggcgacgggagggggcggacgctgggggcggtcatcaaggagaaggacgaggagctggccctcttcctcgagatgcgccgccgcgagaaggagcgcggcgctgctgccgctgccgcggcggccgagcagctgctgctttccggggaccgcgtcgacgtggcgcgggatgggatgcttctcgtcgaccaaccgccgccgcgcccgcagcctcccgccggtgagagagctccgcgggggacgggatgctgccgttcgttcgcttttttattctgctcttgtgttgggcgaaaccctagcttaccagtgtctggggttttggggggtgatgtgtgtggtagagcacaaggcggcggcgtacaggatgaccggcgggttcaggagagcgcccggcggcgccgacgacttcctcaattcggacggcggcgacaagaacgattacgactggtgcgtttgctgctgatttcgaattactacaagttttggataccactgctatctggtagattttgtggtgttttagttgtgcgtgtgacacatgcgttggtgcgagaacgtttgctctggagctaatttgtactgcaatggtgtgaaatgcggtttattctttgttctgtagccgaaattgcaggaaattttgcgagacttgcagagttttctcttgggtgcccaaacgtttggttattttactgtgctgtagctttgttggcgataaaattttgaccggtagtttgttaattctgaattatagttactagcttgttgattgtctctgatgtttatgcgatttcagctaatgcttcattgtataattgattaacccctcgaaaatgtaattgccccccttaatttcatacttttaattctgcggttgatgctttaatcaattaatttttttgacgctatgcataaagagtggcttttgtgtgaatccggtgttagttagaatttagctgttgtttctggaaaagttggtgagggtggtaccggttgttgaggttactgttgggtctcttgttgacccttgttattgcttctttctctctttagttagtttcctgatttaatgcttgcacataaagttgtgctctttgcttttggttattgcgcttaagcgctttaggtggtgtaatctggttgcaccgctacaggcatgacctctggaagagctctgtttgtggacctgtcaatttgttgtgttttagttggtctcagttccttctctttgcttttttggttggttaaatagatagtttgtctgtaacgtggttttgctttctgtaaatttagtgcctgagtattggacacacattttaacatttgataccttattcttagcccctatgagctacttatcgttgtcctaattgacttgaagtttatttggtaggtgcgtaaatgactgtccttctgtgagttccacgcatcaataggtgtgggaaagttaggcgcatttaggatagggtgtagaattattctgggagtattttgatatctagatagccatgctaacacttaattatgttatgagtttgactatttgattgctaggtgatgtttggttggtaggtgacagttagattgtctgattgtggaacaaatcacagggtatttgtcagttttcgtgtggttgtagaagtgctggtttggttattcaactttgttaaggtttactgtaattgttcttgggtggtgaagttagttaaaccaagtgcataaatcacacagtgctgcatattcataaaaaatgctcttaccagactctggcatatttcatcagaagtgctcaatctgagtctatgtgagcgaattagttttgaaatgatttccttgttttgtattaaaattgttttgtatgatgacctctgacatgttgcattttttgccattttgttccttgcatcttctatattcaaattttaagtatttaaaagtaattgtgcagcctttctcacagcagacttgttcgctttcaggcttctgactccaccaggaactccactttttccatctctagaagagtcaaaaaagtccccagtgagccaaactggaaccccaaagactcgcccaactgccttaaaatcaagggttagcctattgatcatgataaatacacctcagcaaaagaaattcctctcttggtggatatcaaatgatttgatctgaatgaatctatggaccaaaagtggcttcactgtatcttaagttgattcaaattaccatccaaggaattaacaaacagactctccaaggataatctatcttctcatagacctgtcaacatattttccttgaatatagcattttattatgtcggacatttagtttaaatcatgcttttagattatttttcttttgactgaaaagcctttcgcttgtctatcataaagataaaccgtttcttcattattagtatgcattttagtttcaccggttacattacttatcttaagtatgacttgtgttcttgactgttttacatcttcgttaactttctattttatctctttgtttgtggtactccagttggccaatcatccagatcctccatcaagaacaacccttccattgagagcaacatcatcaaacaacttgaactcagctgccacaacacgtaggccgtcatcttctggagggcacacatctaattcatcaaggccttcaacaccaactgggcggcctgcactgaccaatacctccaaaggttcaagaccttcaacccccacatctcgggcaactgtaccttctaagtctggacctcctgccccaagatcatcaactcccacttccaggtcaacacttacttcagcaaggtcaacaacaccttcaagaacatctggccctgctaccaggacatcaattccttcaggtagagcatcagcaccagctagcaggtcatccacacctacttcaagatcatcgatacctgctaccaggtcatccacgccatcatccaggccctccataccagcacaaagcaagccagtatcaaggtcatcaaccccaacaagacggccttctgccacttccacccaacatggtagcttggctgcaccagttcgatctacctcaatctccaaaccagcccctacaatgtccaaaagttcttcaccggcaaaaactatagcgtcaacaccttcaaggggcagctcacctactgtcaaatcgagaccatggaagccatctgaaatgcctggcttctcacttgacgctcctccaaatctgaggacatcactaccagaaagaccaacctctgctactcgtggcagacctggagctcctagttctaggtcttcctctgtggagcctgggccagctgctcggccaagacggcagtcttgctctccttctagagggaggactttaaatggtagtgtgccttcaggtagttcggtgccagcagtgagaagatcacatcttaatagtggtgacagtgtcaatcctgttcaaatgggtaataagatggttgagagggtagtgaacatgagaaggctagttcctccaaaacatgatgaccaaagatccagcctcaacggtctatctggaaaatcatcaaactctccagatagctctggcttcggtaggacattgtcaaaaaagtcacttgacatggctcttcgacatatggtacactactttctctaagatagtcaatactacaataaatttctatgttcaattaacttgaacttgatgtgtattattgtacacaggacatacggcgcagcattccaaacaatttacggcctcttatgacaagcataccagcatcctctgtgcatagcgcacggtcagggtctacaaggagcagaccaattagtgtttcagactctcctcttgcaacaagcagcaatgccagttctgagccgagcgtcaacaacaacctgatgtgcttggacagcatcgaaatcgatgatgagttgtgcagtgatagggcaggacaatacaggcgatgatttgcttctttgatagtataatagttatgattcctgcgaaggtttacgaccttaaaatgttcagagcagcgatgggaggatcatctccaagatgacctgatgggttcctattctcatatgtagttcattgggtgtccaatatttatccggtttattcatgttatgttgcgagctgctccatgtgcaactttattctggaccttatatgctattgaaaagcgtcttttatgtgttcagtccttgagtatcattttcagtactttgggagtttaagttaggtcttcttagccccttgagtctttgacaccatcttgtagcggatttcgcgctacagcctggtagtcacatgtgtttccccggctgaactgtattgacatttttctctgttgttgtatcagcaatgtaaatttagtagcattttttctttcaagtaatattttctcaggagacagtcactgctgccgtaaaactgttgctgtaatcttgtaaattccaaattggtaag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0141900, RefSeq:Os01g0141900