Os01g0142000

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0142000| Description = Conserved hypothetical protein| Version = NM_001048523.1 GI:115434459 GeneID:4325485| Length = 1370 bp| Definition ...")
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Gene Name

Os01g0142000

Description

Conserved hypothetical protein

Version

NM_001048523.1 GI:115434459 GeneID:4325485

Length

1370 bp

Definition

Oryza sativa Japonica Group Os01g0142000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2263304..2264673

Sequence Coding Region

2263304..2264211,2264490..2264673

Expression

GEO Profiles:Os01g0142000

Genome Context

<gbrowseImage1> name=NC_008394:2263304..2264673 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2263304..2264673 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgtccaagcacatcaggttgttgttgacgctcggctcagaactggcattgctgcttgttgcaagaggagagtctgaaacactaattggtctgctccttgtagaccctgaccgtgcgctatgcacagaggatgctggtatgcttgtcataagaggccgtaaattgtttggaatgctgcgccgattgacactgtcaccactattaagatgtgatcttctcactgctggcaccgaactacctgaaggcacactaccatttaaagtcctccctctagaaggagagcaagactgccgtcttggccgagcagctggcccaggctccacagaggaagacctagaactaggagctccaggtctgccacgagtagcagaggttggtctttctggtagtgatgtcctcagatttggaggagcgtcaagtgagaagccaggcatttcagatggcttccatggtctcgatttgacagtaggtgagctgccccttgaaggtgttgacgctatagtttttgccggtgaagaacttttggacattgtaggggctggtttggagattgaggtagatcgaactggtgcagccaagctaccatgttgggtggaagtggcagaaggccgtcttgttggggttgatgaccttgatactggcttgctttgtgctggtatggagggcctggatgatggcgtggatgacctggtagcaggtatcgatgatcttgaagtaggtgtggatgacctgctagctggtgctgatgctctacctgaaggaattgatgtcctggtagcagggccagatgttcttgaaggtgttgttgaccttgctgaagtaagtgttgacctggaagtgggagttgatgatcttggggcaggaggtccagacttagaaggtacagttgcccgagatgtgggggttgaaggtcttgaacctttggaggtattggtcagtgcaggccgcccagttggtgttgaaggccttgatgaattagatgtgtgccctccagaagatgacggcctacgtgttgtggcagctgagttcaagttgtttgatgatgttgctctcaatggaagggttgttcttgatggaggatctggatga</cdnaseq>

Protein Sequence

<aaseq>MLSKHIRLLLTLGSELALLLVARGESETLIGLLLVDPDRALCTE DAGMLVIRGRKLFGMLRRLTLSPLLRCDLLTAGTELPEGTLPFKVLPLEGEQDCRLGR AAGPGSTEEDLELGAPGLPRVAEVGLSGSDVLRFGGASSEKPGISDGFHGLDLTVGEL PLEGVDAIVFAGEELLDIVGAGLEIEVDRTGAAKLPCWVEVAEGRLVGVDDLDTGLLC AGMEGLDDGVDDLVAGIDDLEVGVDDLLAGADALPEGIDVLVAGPDVLEGVVDLAEVS VDLEVGVDDLGAGGPDLEGTVARDVGVEGLEPLEVLVSAGRPVGVEGLDELDVCPPED DGLRVVAAEFKLFDDVALNGRVVLDGGSG</aaseq>

Gene Sequence

<dnaseqindica>463..1370#1..184#atgctgtccaagcacatcaggttgttgttgacgctcggctcagaactggcattgctgcttgttgcaagaggagagtctgaaacactaattggtctgctccttgtagaccctgaccgtgcgctatgcacagaggatgctggtatgcttgtcataagaggccgtaaattgtttggaatgctgcgccgtatgtcctgtgtacaataatacacatcaagttcaagttaattgaacatagaaatttattgtagtattgactatcttagagaaagtagtgtaccatatgtcgaagagccatgtcaagtgacttttttgacaatgtcctaccgaagccagagctatctggagagtttgatgattttccagatagaccgttgaggctggatctttggtcatcatgttttggaggaactagccttctcatgttcactaccctctcaaccatcttattacccatttgaacaggattgacactgtcaccactattaagatgtgatcttctcactgctggcaccgaactacctgaaggcacactaccatttaaagtcctccctctagaaggagagcaagactgccgtcttggccgagcagctggcccaggctccacagaggaagacctagaactaggagctccaggtctgccacgagtagcagaggttggtctttctggtagtgatgtcctcagatttggaggagcgtcaagtgagaagccaggcatttcagatggcttccatggtctcgatttgacagtaggtgagctgccccttgaaggtgttgacgctatagtttttgccggtgaagaacttttggacattgtaggggctggtttggagattgaggtagatcgaactggtgcagccaagctaccatgttgggtggaagtggcagaaggccgtcttgttggggttgatgaccttgatactggcttgctttgtgctggtatggagggcctggatgatggcgtggatgacctggtagcaggtatcgatgatcttgaagtaggtgtggatgacctgctagctggtgctgatgctctacctgaaggaattgatgtcctggtagcagggccagatgttcttgaaggtgttgttgaccttgctgaagtaagtgttgacctggaagtgggagttgatgatcttggggcaggaggtccagacttagaaggtacagttgcccgagatgtgggggttgaaggtcttgaacctttggaggtattggtcagtgcaggccgcccagttggtgttgaaggccttgatgaattagatgtgtgccctccagaagatgacggcctacgtgttgtggcagctgagttcaagttgtttgatgatgttgctctcaatggaagggttgttcttgatggaggatctggatga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0142000, RefSeq:Os01g0142000