Os01g0142500

From RiceWiki
Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0142500| Description = Homeodomain-like containing protein| Version = NM_001048527.1 GI:115434467 GeneID:4325454| Length = 2863 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0142500

Description

Homeodomain-like containing protein

Version

NM_001048527.1 GI:115434467 GeneID:4325454

Length

2863 bp

Definition

Oryza sativa Japonica Group Os01g0142500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2280913..2283775

Sequence Coding Region

2281536..2281977,2282523..2282965

Expression

GEO Profiles:Os01g0142500

Genome Context

<gbrowseImage1> name=NC_008394:2280913..2283775 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2280913..2283775 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgatgagggatgtgtgcatggaggtgctgcctccgatggaccactacgcgtcgagggggaactggttcatggcgcgcaagtggtcgccggaggagaacaagcagttcgagcgggcgctcgccgggctggacctgcggtgcccggactgggaccgggtggcgcgcgccatcccgggcaggtcggcgctcgaggtcatgaaccacttcagggacctcgagctcgacgtccagcagatcgagaatggcatggtgcccttcccggtctacggcgccgccgccgccggcggcgcgttcacactgcagtgggatggcgcccatggcgtcggggacttcaggaacgcgtaccggttcggcggcggcggcggcgggaagcggcacttcggccgtacgccggagcaggagaggaagaaaggcgtgccatggacggaggaggagcacaagttgttcctcttaggactgaagaaatatgggaaaggggattggaggaacatatcccgcaatttcgtgcagacgaggacgccgacgcaggttgccagccatgcgcagaagtatttcatcaggctcaactccggtggcaaggacaagaggagatccagcatccatgacattaccacggttaacctgacggatgaccggcctccctcgccatcacagtcctccttgatcagcaatcagtccaacacatcaactctgaccgcagcggttgcccccttctcatcgacggccgatgtcaagccacagaatgccgcgaatgcgtccttcaattcgccaagccggacacttgggatggcgggttacgggatgggattgcaagatcaaggattgcagtgtggtggtcctctacatgatcagttggccgcgagccgaagcatattgttttag</cdnaseq>

Protein Sequence

<aaseq>MMMRDVCMEVLPPMDHYASRGNWFMARKWSPEENKQFERALAGL DLRCPDWDRVARAIPGRSALEVMNHFRDLELDVQQIENGMVPFPVYGAAAAGGAFTLQ WDGAHGVGDFRNAYRFGGGGGGKRHFGRTPEQERKKGVPWTEEEHKLFLLGLKKYGKG DWRNISRNFVQTRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLTDDRPPSPS QSSLISNQSNTSTLTAAVAPFSSTADVKPQNAANASFNSPSRTLGMAGYGMGLQDQGL QCGGPLHDQLAASRSILF</aaseq>

Gene Sequence

<dnaseqindica>1799..2240#811..1253#aaggcccaatcaccagctgccactctcaagaacctgactttggatcgctatcccttttgcttcttattagtgctcagggaaagaaagctatagcagtagctaaataagccagagagaggctaagagagagagaggtgaggggagagaagaaatcctcgcagaattcgagcaagaaccgagggagatcgatcgcctcttgtcctcgttccgaggcagagatcgacctgaaggtgagtgattttttggtgtttggttaaattttgattctttttggagttgatttggttcttggtaatgcaatttagtgtggttccaaacgttgccgtgtttgtcttggatgaggtttggtcaatttgctaagagatttgtgaattttgggtttttttattaattaatccaatctgttcttgcaatcaatctaatctgttcggtaaggtgcctcttattcagtttgttggtactctcatctcatctaatcataagggtaggtgttacaattatctcagagtttcagttgatttgctcgtagtaaagattccaaccttttctccccccctaaatctctcctccaattccatgtgtatctcgtctgattttgcatcaacgcaagttcctgttgataaattcccgtggcttttgcaagcttttgcaaattcgcaatgttatttagaatccgatcttgttctgatacccaaacaaaaaaaaaaggaaaaaaaaagaaaatctcaccttcttatttacttctactttccagtgagctgagctgcggcaaggaggaggaggaggaggaggaggagaaggagattggagatgatgatgagggatgtgtgcatggaggtgctgcctccgatggaccactacgcgtcgagggggaactggttcatggcgcgcaagtggtcgccggaggagaacaagcagttcgagcgggcgctcgccgggctggacctgcggtgcccggactgggaccgggtggcgcgcgccatcccgggcaggtcggcgctcgaggtcatgaaccacttcagggacctcgagctcgacgtccagcagatcgagaatggcatggtgcccttcccggtctacggcgccgccgccgccggcggcgcgttcacactgcagtgggatggcgcccatggcgtcggggacttcaggaacgcgtaccggttcggcggcggcggcggcgggaagcggcacttcggccgtacgccggagcaggagaggaagaaaggcgtgccatggacggaggaggagcacaagtgagtagtagtaacattcacttcttgttcttcatcatcttcttcttcttctctttgagagtgattgattattactatctcatcgctctctgtgtcatgatgcagcagcaacaggatttagttggggagattgaattttagttttcttttgctgaattcactaaccatcactgttttttggtcgtttacatcacctgatggctatgggagttttataacttggaattattcaaaccatgaacaattggggggatggggagagggattttgagtaggagaggaaggggaatttcttttgtttctttggattcattcaccatcacttgattttttttttttttgggggggggggggttggtttacatcattttgattgctatggaagtcttgcaacttgggttaatccattttctttcttcattatgatccaagaaactgtcatgtagcttgatgtgtgaatgtttaggcctttggtataatccgatcaggataagcaagaattggtgaacagttactgatcatgatcatgctttgttctttgccaggttgttcctcttaggactgaagaaatatgggaaaggggattggaggaacatatcccgcaatttcgtgcagacgaggacgccgacgcaggttgccagccatgcgcagaagtatttcatcaggctcaactccggtggcaaggacaagaggagatccagcatccatgacattaccacggttaacctgacggatgaccggcctccctcgccatcacagtcctccttgatcagcaatcagtccaacacatcaactctgaccgcagcggttgcccccttctcatcgacggccgatgtcaagccacagaatgccgcgaatgcgtccttcaattcgccaagccggacacttgggatggcgggttacgggatgggattgcaagatcaaggattgcagtgtggtggtcctctacatgatcagttggccgcgagccgaagcatattgttttagatgaaaccaatccaggcagcaccatggatcagatgtctagtgtaatattgccctgcttgtagcttcatcactacctgtattgaagtaattaattatggggaatttttcggaacataacagagggggtgtggagggatctttgtgccatgttggtgactgataacctgtgatccataattgttggcaatactgagaatgtaacgaaacgaacgtcaagaacttgatgccggtggtattttcagacagtgattgctgctagtgctgaacactgatcatgcatgaagtggactttgtattcaatcatggatccagcttttgtgaggtggatgaggagaattctattcactatgttcttctggtcagtgatgcactgagaaacaccggttgccatctgattgaggggtttcagatcatgctgtacttcacacatacttatccacagttctatcaatttgctcattggtgctccccccatttgatgtttgcatagaatttatttggataaacggaaaataagtttgctctgagtcattcagcattattactactttcagttgctcatctagtcaacttttcttgtttgtagcttcatttttataataaaataataacttctttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0142500, RefSeq:Os01g0142500