Os01g0143100

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Revision as of 04:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0143100| Description = Mitochondrial substrate carrier family protein| Version = NM_001048530.1 GI:115434473 GeneID:4325457| Length = 3434 ...")
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Gene Name

Os01g0143100

Description

Mitochondrial substrate carrier family protein

Version

NM_001048530.1 GI:115434473 GeneID:4325457

Length

3434 bp

Definition

Oryza sativa Japonica Group Os01g0143100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2349069..2352502

Sequence Coding Region

2349336..2349583,2349719..2349786,2349880..2349950,2350022..2350123,2350309..2350449
,2350540..2350716,2352228..2352389

Expression

GEO Profiles:Os01g0143100

Genome Context

<gbrowseImage1> name=NC_008394:2349069..2352502 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2349069..2352502 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagacggaggcgcgggtcggggtcgtcgtcgacggcggccgcgccgccatgggccgccgccacatcggcaccgtcgcccacctcgccgccgggggcttcgccggcgccgtcagcaagacctgcaccgccccactcgcccgcctcaccatcctcttccaggtggcaggtatgcattcagatgtggcagctctaaagaagtacagcatatggcatgaagcttcacgaatagttcgagaagaaggatttggagcattttggaaaggcaatctggtgacaattgtgcatcgtttaccttattctgccatcagcttttattcatatgagcgctacaaaaaatttctccaaagggttcctggccttgatgaagactcaaattatgttggtgttgctcgtttacttagtggcggtttggcaggaattactgctgcatctgtaacttatcccttggatgttgtccgtactcgtttggcaacacagaaaacaaccaggtattacaaaggcatctttcatgcagtgtctaccatttgtagagatgagggtgtcaaaggattgtacaagggccttggggccacattattgggagtcggacctagcatagcaatcagctttactgtatatgaatcattgaggtctcattggcaaatggaaaggccccaagattcccctgcagttgttagtttgttttctgggagtctatctggtattgcatcatctactgccacatttccccttgatcttgtaaagagacgaatgcaactgcaaggggcagctgggacatcgtcagtctgtaaatcaagcataactggaaccatccgccaaatctttcagaaggaaggccttcgtggcttctacagagggatagtccctgagtacctgaaggttgttcctagtgtagggattgccttcatgacctatgagaccctgaagagcttgctctccagcatagacgaagacgacgagagctga</cdnaseq>

Protein Sequence

<aaseq>MQTEARVGVVVDGGRAAMGRRHIGTVAHLAAGGFAGAVSKTCTA PLARLTILFQVAGMHSDVAALKKYSIWHEASRIVREEGFGAFWKGNLVTIVHRLPYSA ISFYSYERYKKFLQRVPGLDEDSNYVGVARLLSGGLAGITAASVTYPLDVVRTRLATQ KTTRYYKGIFHAVSTICRDEGVKGLYKGLGATLLGVGPSIAISFTVYESLRSHWQMER PQDSPAVVSLFSGSLSGIASSTATFPLDLVKRRMQLQGAAGTSSVCKSSITGTIRQIF QKEGLRGFYRGIVPEYLKVVPSVGIAFMTYETLKSLLSSIDEDDES</aaseq>

Gene Sequence

<dnaseqindica>2920..3167#2717..2784#2553..2623#2380..2481#2054..2194#1787..1963#114..275#ctctctctctgcttcgaattcctcacctcacctcacctccaggcggcggcgaaaccaccagccgcttcgcttcgcctcgattccaaccctagccctacccctatccgaatcccatgcagacggaggcgcgggtcggggtcgtcgtcgacggcggccgcgccgccatgggccgccgccacatcggcaccgtcgcccacctcgccgccgggggcttcgccggcgccgtcagcaagacctgcaccgccccactcgcccgcctcaccatcctcttccaggtgagcgcgtccccccagcatttccctgcctgagatttcgctcttcgtccgtacgggcagtattgggggtggatgtactggatacggcgaggaggaggaggggattgggagctactgctactgcggaggcgaattttgttaattttccttgtctcgcaagtggaattcggggaggaagatgtttcctcccctcctttttttttttggatgtagggattggttggcacgagcagctacgacgtttgttactaataaccttgttgtgtgttgctttaacatgtgtttaataaatgatttgaccataaaggagtctcccttttgaacacatagggatttctcttcctgtgggtgaaaccagtacaattgtagtacagcataccatgtgttgttgttttggaatcctgtgtgccctaataaggaactgggagtaaagaaagcataagacaaatatgacttcttttgtcactcagaaacggtgggagtactccagtagtgagtagtgactggtgaaaatgtaagcctgagggaagcttttctttgtttataagcgctgtaccgctacttattgcttggcacaaaagcaccttgaaaggaattgaattgtaatagtgaggtactatagtgaagcatcttgctgttagattgttagtcgtcaatggaagctaaaaacggcagcagagttttcgtgtattgacattttcttactagttcaattctccggtaaaatttgtatttattatgttgacaactttagatgcaaaatatcgcactgaagaataattttcctttcttagcgtgttagaaaactttggagatttgggcacctatggaaatcttattatatacgtgcctcaatttgtgcccgcacaaggctaacggcagtttggaacaatccttttcatgccattgtaggcgttccagttagcagggactgaaatctaacaggaacagaaggcaagtattccttttgtttctttaatttcagtctattattgttcaaagggttataggaaaaaaataggttcccaatgtgatggcagccagtggtttgtatagaggcaggaacataccatcgtgtgtcgctgaagaaaaagcttcttataaatattgttttttgcgcatttaagtattcctttgttcactgtaaaggtgccagaaaggatctaatttggtatttttgttgtacatactgattagtgctcaaattacttccatacatgatataaagtgttctcacctcactttgtataaaaaataattggtcaacaataggtagttggtccaatcgtgcatcaaaagcagcaaatcgataccatatggagttcccctattctcttactagatacagagttgatgcatggcattgttatgcttaactatgtgtctaaaccttgtgattcctgcttcataataacgagctacttatttctgttctgtgcctggtattagattaaattataactactgaataaggtttgttattgcacgtgcttgacatactgatctgacaggtggcaggtatgcattcagatgtggcagctctaaagaagtacagcatatggcatgaagcttcacgaatagttcgagaagaaggatttggagcattttggaaaggcaatctggtgacaattgtgcatcgtttaccttattctgccatcagcttttattcatatgagcgctacaaaaaagtaagcagttcgttagcacttaatgcatgaattatgatgaggttctgcattttattatcattagctaaatgatgtgaaatatcattgcagtttctccaaagggttcctggccttgatgaagactcaaattatgttggtgttgctcgtttacttagtggcggtttggcaggaattactgctgcatctgtaacttatcccttggatgttgtccgtactcgtttggcaacacaggtaatgctatcctttttccaaataaaacattgcttattgatgaatttaaacatcatctttaatatctccaaaatattaatttttgtatgatgcaggcttcgggcttagtgtattttactttatttcaactattgggaggcttcatatttggcattcactagaaatttaatcttaaatttgtgcagaaaacaaccaggtattacaaaggcatctttcatgcagtgtctaccatttgtagagatgagggtgtcaaaggattgtacaagggccttggggccacattattggtaggccatgaaccttttactgagatatgtcaatttttaagttgggctgcctgtaatttttgaagttacagggagtcggacctagcatagcaatcagctttactgtatatgaatcattgaggtctcattggcaaatggaaaggtgaacatcaatacatcattatttctctcgtttgaataatatttgagtatctattttggtcatttccaactgatggctgtggacgtgcttcaggccccaagattcccctgcagttgttagtttgttttctgggagtctatctggtattgcatcatctactggtaagccatgtttaactcctcttaacctttcttcttatttttgtaaaactttattgaataaagaacaccatgacttctgtcatctgaatactgactcacagcatttccattggtaaaatgctataaatattgcagccacatttccccttgatcttgtaaagagacgaatgcaactgcaaggggcagctgggacatcgtcagtctgtaaatcaagcataactggaaccatccgccaaatctttcagaaggaaggccttcgtggcttctacagagggatagtccctgagtacctgaaggttgttcctagtgtagggattgccttcatgacctatgagaccctgaagagcttgctctccagcatagacgaagacgacgagagctgagatctttacaaaatggctacacgcttcaaagagatttctggcaatgagttactgtgagactgaactgtatcagagtgactacaggccagacagttttgtaggtgttgataggataaagctttacctgatatgtgtcttgtgttgtaccatataggtcaagaagagcaaatgagtattccatccgtgtacacctctgagcattatgctcaaattttgtgtcgtaagatgtaacgccccttgcaaggatgggaaaagaaactctcaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0143100, RefSeq:Os01g0143100