Os01g0144300

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Revision as of 04:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0144300| Description = Conserved hypothetical protein| Version = NM_001048539.1 GI:115434491 GeneID:4325467| Length = 1879 bp| Definition ...")
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Gene Name

Os01g0144300

Description

Conserved hypothetical protein

Version

NM_001048539.1 GI:115434491 GeneID:4325467

Length

1879 bp

Definition

Oryza sativa Japonica Group Os01g0144300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2387605..2389483

Sequence Coding Region

2387942..2387973,2388061..2388684,2388814..2389104,2389338..2389404

Expression

GEO Profiles:Os01g0144300

Genome Context

<gbrowseImage1> name=NC_008394:2387605..2389483 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2387605..2389483 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatgaaatcagaaaattgaagcgcgggatcagcaccaaacgaggtgatcaccccgtccaaaatggccaaaatccagtcgatgaatgggaggagcaacaacgatactggccttcgccacgggcaccgccggtgagtccgatgggatcgccgcggaccccaaatgggagccagaagaagccagttctcggcaaggtgaagagcaaggctaagaaatggatgcacctgctgcatcacaagaagaagccgcaagaagacatgatgtggaccccccgagcaggacccagtgcagacgacagcaaggagcacaacgatgcagactacggatccccaagcacagctcgacatccccattcctcgtgtgaatcagcatgtgcacctgaggttttcttggaagcatcatcaaggcagaattccccactcccgagcccaactgcacacaaggagcaaccatacttcaaggtcagcagcaggtttgagtcagaaatgaaggaagccaatgaaatgctgagggaatcaaagcagctccgtgtcaacacaaccaaaccgaagactgtaacatttgcgccaatcttagaacaggggccagaacctgtaaaaaatgattggcacagcaaagaactgtcagaaacagcaaccgagatattcagtcatgcatatgctatagtctgtgaggcagtcctcaggatggtctctataatccaaggcgcgatgtcatcatataatattgacagaaggcaaatgttagagaagatcgtatcgttcaagagatacatgatgctgaagctggcacctggagaaggtgataaagtactctcagaagtcattactgaggctgtcctcgatatgtttgacgcctggtgtgagaatgttgagaggcctttggtacagagggcaaaggaagtgtattcttggtttctgccagaaaggagagaagagttacctcctgttccactgtccacccatccttgtgtgtatgaagatgcagaagaattttactcattagagaattga</cdnaseq>

Protein Sequence

<aaseq>MNEIRKLKRGISTKRGDHPVQNGQNPVDEWEEQQRYWPSPRAPP VSPMGSPRTPNGSQKKPVLGKVKSKAKKWMHLLHHKKKPQEDMMWTPRAGPSADDSKE HNDADYGSPSTARHPHSSCESACAPEVFLEASSRQNSPLPSPTAHKEQPYFKVSSRFE SEMKEANEMLRESKQLRVNTTKPKTVTFAPILEQGPEPVKNDWHSKELSETATEIFSH AYAIVCEAVLRMVSIIQGAMSSYNIDRRQMLEKIVSFKRYMMLKLAPGEGDKVLSEVI TEAVLDMFDAWCENVERPLVQRAKEVYSWFLPERREELPPVPLSTHPCVYEDAEEFYS LEN</aaseq>

Gene Sequence

<dnaseqindica>1511..1542#800..1423#380..670#80..146#aactttaggatagagtccatttcttgcctgatcagctcctcccaaagctctaggatttggttccattcttgcacaaatcatgaatgaaatcagaaaattgaagcgcgggatcagcaccaaacgaggtgatcaccccgtccaaaatggtaatagatttgtcggtcttggttcttttcttctcatctcaaatttcaccattcctgcatgtttcataatttctcatgacatttcgatcttggaaaatgtatagcttgatcaatgtgttccaaattattcttctggaagtaatgatacagggatgttagtgcctcacctgcctagaaataaagaaatgatcatgcctgattgacatttccctcagcgtctctgaatattgcaggccaaaatccagtcgatgaatgggaggagcaacaacgatactggccttcgccacgggcaccgccggtgagtccgatgggatcgccgcggaccccaaatgggagccagaagaagccagttctcggcaaggtgaagagcaaggctaagaaatggatgcacctgctgcatcacaagaagaagccgcaagaagacatgatgtggaccccccgagcaggacccagtgcagacgacagcaaggagcacaacgatgcagactacggatccccaagcacagctcgacatccccattcctgtatgtctgccagacttcagaatattgcatgcattggacaatctccagttaaattcagtcaagatatcaattatagtataattttgttatgatgaagagtaatacttgtgttttccatgtaaatcgtagcgtgtgaatcagcatgtgcacctgaggttttcttggaagcatcatcaaggcagaattccccactcccgagcccaactgcacacaaggagcaaccatacttcaaggtcagcagcaggtttgagtcagaaatgaaggaagccaatgaaatgctgagggaatcaaagcagctccgtgtcaacacaaccaaaccgaagactgtaacatttgcgccaatcttagaacaggggccagaacctgtaaaaaatgattggcacagcaaagaactgtcagaaacagcaaccgagatattcagtcatgcatatgctatagtctgtgaggcagtcctcaggatggtctctataatccaaggcgcgatgtcatcatataatattgacagaaggcaaatgttagagaagatcgtatcgttcaagagatacatgatgctgaagctggcacctggagaaggtgataaagtactctcagaagtcattactgaggctgtcctcgatatgtttgacgcctggtgtgagaatgttgagaggcctttggtacagagggcaaaggaagtgtattcttggtttctgccagaaaggagagaagagttacctcctgttccactgtccacccatccttgtgtgtatgaaggtaagcttcaccaggtgtgcaagggtagtcctatctgcagaatattattatagggtttagcaataacttgaagcctgtgcaatgcagatgcagaagaattttactcattagagaattgactacggcttgaagcatgagatcaagactctatgaaacaagataagtagagagatgtttaccttacaatgtccgaagaccggaggcgaagacagagtgttcggcccaagtatactttgttcatagaattacatcataccttacaatggctgcatgtgaaaccaaaaggaggtttctgtggctgtgtaccagaaactaatgtacaagatttcaatcttaagtgtctcttcagataaagctcagtatcagatattagattcacaatcagtgaccacaaattccacaatgtaggcagtacagaaatattgaaagaaaacaaaaatcctccaactgcagaac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0144300, RefSeq:Os01g0144300