Os01g0149700

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Revision as of 04:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0149700| Description = Protein kinase-like domain containing protein| Version = NM_001048562.2 GI:297596113 GeneID:4324513| Length = 3320 b...")
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Gene Name

Os01g0149700

Description

Protein kinase-like domain containing protein

Version

NM_001048562.2 GI:297596113 GeneID:4324513

Length

3320 bp

Definition

Oryza sativa Japonica Group Os01g0149700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2687623..2690942

Sequence Coding Region

2687623..2688032,2688195..2689921,2690017..2690942

Expression

GEO Profiles:Os01g0149700

Genome Context

<gbrowseImage1> name=NC_008394:2687623..2690942 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2687623..2690942 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatacgtcggatgaggcttgcattgtccctcctctgcgtcctgatgacgatcggcaccggcacggcaagcgatgagccggcgctgcttgctctcaaggcagggctcagcgggagcagctcaagcgcgctcgcctcatggaacaccagcgccagcttctgcggctgggagggcgtgacatgcagccaccggtggccgacgagggtggcggcgctggacctgccgtcgagcaacctcaccggcacgctcccgccggccgtcgggaacctcaccttcctacggcggctcaacctgagctccaaccagctgcacggcgagatacctccggccgtcggccggctccggcgtctcctggtcctcgatatggaccacaactccatctcaggtgtgatccctgctaatctgagctcctgcatcagcttgacaatcctgcggatccagtccaacccgcagcttggcgggcgaattcctccggagctcggtaacacgctgccacggctcaagaagcttcagctcaggaagaacagcttaacagggaagatcccggcctcgctagccaacctttcgtcgttgcagcacttgtctctgagttacaacaagcttgagggtctcatccctccaggcctcggcgatatcgcaggtctgcgttatctttttctcaatgcaaacaacctttccggcgaacttccgctatctctgtacaatttgtcgtcgctgatgatgctccaggttggcaataacatgctgcatggcagcatcccttctgacattggtcgcatgcttcccggtatacaagtgtttggattggatgttaaccggtttacaggagtcatccctcattctctctccaatctttcaacactcacggatctgtacctctcagacaacaaattcaccggatttgtgcctcccaacttggggagccagctgcaagaatttgtcctcgctaacaactctttcagtgggcagctgccaaggccaattgggaacctgtcaacgacgctacaaatgctcaatttagataacaacaatatctcggggagcatacctgaggacattggcaatctggtaggcttgagctttctcgatctggggttcaattccatattatctggagtgattcctgaaagcatcgggaagctaacaaacttggttgaaatttccctgtacaataccagcctgtcaggcctcataccggcatctgttggaaatcttacaaatttgaataggatatacgcattctactgcaatttggaaggcccaatcccaccaagccttggggatctaaaaaaactgtttgttctagatttgtcatacaaccatctaaatggttcgatccccaaagaaatttttgagctgcagtcactctcgtggttcttggacttgtcatataattctctgtcaggaccccttccatcagaagttggtagcttggttaacctaaatggaatggatctatccggaaaccagctatctggacaaatacctgacagtataggaaattgtgaagtgatggaagccctctatctagaagagaactcatttgaaggaggaataccacaatctctgagcaacctaaaagggctcaccatactgaacctaaccatgaataagttatctggcaggatccccaacaccattgctaggattcccaatctgcaacagctgtttctagcacacaacaatttttcaggaccaatcccagcaactctacaaaatttgacaacgctgtggcaattagatgtgtccttcaacaaattgcaaggggaagttccagttaagggtgttttcagaaacctgacttttgcatcggttgtggggaataacttgtgcggtggaataccccagcttcacttggctccatgtcccattctcaatgtaagcaagaacagaaaccagcatctgaagtctcttgcaatagctctgccaacaacgggtgcaatattggtgttagtttctgctattgtagttattctgttacaccaaaggaagttcaaacaaagacaaaatagacaagcaacatccctggttattgaggaacagtatcaaagggtttcatattatgcattatcaagaggaagtaatgaattttcagaagccaacctgcttggcaaaggaagatatggttctgtttttagatgtactttagacgatgagagtgcacttgttgctgtaaaagtgttcgaccttcaacaatcaggatcttcaaaaagctttgaggctgaatgtgaggctctgagaagagtacgccaccgttgtctcataaagatcatcacttgttgctcaagtattggtccacagggtcaagagttcaaggcattggtttttgagttcatgcccaatggtagcttggatggttggattcatcccaagtcaagcaatctcactcctagcaatacactcagcctttcacagagactcaacattgctgttgatatctttgatgcactggattatcttcacaatcactgccagccaccaatcatacactgtgatctgaaacctagtaatattcttctatcagaagacaagagtgctaaggttggagattttggcatatcaagaatcctcccgaaaagtagtactaaaactcttcaaagttcgaaaagctcaattggaatcagaggttccattggttatattgcaccagagtatggggaagggtctacaataaccagagcaggcgatacttacagcttaggcatattgttgcttgagatgtttactggaaggagccctactgatgacattttcagggattcaatggatctgcacaagtttgttgcagcttcttttcttcaccaacccctagacatagctgatccaacaatctggcttcatgaagaagaaaatgttgcagatgttaaaaatgaaagcataaaaacaagaattattcaacagtgcttggtgtctgttcttaggctcggcatatcatgctcaaagcaacaacccagagagcgaatgatgttggcagaagctgtatcagagatgcatgcaaccagagatgaatatctcaggtcttggatggtcggccatgaagaacatagcactgtgagctaa</cdnaseq>

Protein Sequence

<aaseq>MAIRRMRLALSLLCVLMTIGTGTASDEPALLALKAGLSGSSSSA LASWNTSASFCGWEGVTCSHRWPTRVAALDLPSSNLTGTLPPAVGNLTFLRRLNLSSN QLHGEIPPAVGRLRRLLVLDMDHNSISGVIPANLSSCISLTILRIQSNPQLGGRIPPE LGNTLPRLKKLQLRKNSLTGKIPASLANLSSLQHLSLSYNKLEGLIPPGLGDIAGLRY LFLNANNLSGELPLSLYNLSSLMMLQVGNNMLHGSIPSDIGRMLPGIQVFGLDVNRFT GVIPHSLSNLSTLTDLYLSDNKFTGFVPPNLGSQLQEFVLANNSFSGQLPRPIGNLST TLQMLNLDNNNISGSIPEDIGNLVGLSFLDLGFNSILSGVIPESIGKLTNLVEISLYN TSLSGLIPASVGNLTNLNRIYAFYCNLEGPIPPSLGDLKKLFVLDLSYNHLNGSIPKE IFELQSLSWFLDLSYNSLSGPLPSEVGSLVNLNGMDLSGNQLSGQIPDSIGNCEVMEA LYLEENSFEGGIPQSLSNLKGLTILNLTMNKLSGRIPNTIARIPNLQQLFLAHNNFSG PIPATLQNLTTLWQLDVSFNKLQGEVPVKGVFRNLTFASVVGNNLCGGIPQLHLAPCP ILNVSKNRNQHLKSLAIALPTTGAILVLVSAIVVILLHQRKFKQRQNRQATSLVIEEQ YQRVSYYALSRGSNEFSEANLLGKGRYGSVFRCTLDDESALVAVKVFDLQQSGSSKSF EAECEALRRVRHRCLIKIITCCSSIGPQGQEFKALVFEFMPNGSLDGWIHPKSSNLTP SNTLSLSQRLNIAVDIFDALDYLHNHCQPPIIHCDLKPSNILLSEDKSAKVGDFGISR ILPKSSTKTLQSSKSSIGIRGSIGYIAPEYGEGSTITRAGDTYSLGILLLEMFTGRSP TDDIFRDSMDLHKFVAASFLHQPLDIADPTIWLHEEENVADVKNESIKTRIIQQCLVS VLRLGISCSKQQPRERMMLAEAVSEMHATRDEYLRSWMVGHEEHSTVS</aaseq>

Gene Sequence

<dnaseqindica>2911..3320#1022..2748#1..926#atggcgatacgtcggatgaggcttgcattgtccctcctctgcgtcctgatgacgatcggcaccggcacggcaagcgatgagccggcgctgcttgctctcaaggcagggctcagcgggagcagctcaagcgcgctcgcctcatggaacaccagcgccagcttctgcggctgggagggcgtgacatgcagccaccggtggccgacgagggtggcggcgctggacctgccgtcgagcaacctcaccggcacgctcccgccggccgtcgggaacctcaccttcctacggcggctcaacctgagctccaaccagctgcacggcgagatacctccggccgtcggccggctccggcgtctcctggtcctcgatatggaccacaactccatctcaggtgtgatccctgctaatctgagctcctgcatcagcttgacaatcctgcggatccagtccaacccgcagcttggcgggcgaattcctccggagctcggtaacacgctgccacggctcaagaagcttcagctcaggaagaacagcttaacagggaagatcccggcctcgctagccaacctttcgtcgttgcagcacttgtctctgagttacaacaagcttgagggtctcatccctccaggcctcggcgatatcgcaggtctgcgttatctttttctcaatgcaaacaacctttccggcgaacttccgctatctctgtacaatttgtcgtcgctgatgatgctccaggttggcaataacatgctgcatggcagcatcccttctgacattggtcgcatgcttcccggtatacaagtgtttggattggatgttaaccggtttacaggagtcatccctcattctctctccaatctttcaacactcacggatctgtacctctcagacaacaaattcaccggatttgtgcctcccaacttggggaggttgcaatatcttcagtatttgtatttggtaggaaatcaacttgaggcagataacaccaagggctgggaatttccacttcactgtcaaactgcagccagctgcaagaatttgtcctcgctaacaactctttcagtgggcagctgccaaggccaattgggaacctgtcaacgacgctacaaatgctcaatttagataacaacaatatctcggggagcatacctgaggacattggcaatctggtaggcttgagctttctcgatctggggttcaattccatattatctggagtgattcctgaaagcatcgggaagctaacaaacttggttgaaatttccctgtacaataccagcctgtcaggcctcataccggcatctgttggaaatcttacaaatttgaataggatatacgcattctactgcaatttggaaggcccaatcccaccaagccttggggatctaaaaaaactgtttgttctagatttgtcatacaaccatctaaatggttcgatccccaaagaaatttttgagctgcagtcactctcgtggttcttggacttgtcatataattctctgtcaggaccccttccatcagaagttggtagcttggttaacctaaatggaatggatctatccggaaaccagctatctggacaaatacctgacagtataggaaattgtgaagtgatggaagccctctatctagaagagaactcatttgaaggaggaataccacaatctctgagcaacctaaaagggctcaccatactgaacctaaccatgaataagttatctggcaggatccccaacaccattgctaggattcccaatctgcaacagctgtttctagcacacaacaatttttcaggaccaatcccagcaactctacaaaatttgacaacgctgtggcaattagatgtgtccttcaacaaattgcaaggggaagttccagttaagggtgttttcagaaacctgacttttgcatcggttgtggggaataacttgtgcggtggaataccccagcttcacttggctccatgtcccattctcaatgtaagcaagaacagaaaccagcatctgaagtctcttgcaatagctctgccaacaacgggtgcaatattggtgttagtttctgctattgtagttattctgttacaccaaaggaagttcaaacaaagacaaaatagacaagcaacatccctggttattgaggaacagtatcaaagggtttcatattatgcattatcaagaggaagtaatgaattttcagaagccaacctgcttggcaaaggaagatatggttctgtttttagatgtactttagacgatgagagtgcacttgttgctgtaaaagtgttcgaccttcaacaatcaggatcttcaaaaagctttgaggctgaatgtgaggctctgagaagagtacgccaccgttgtctcataaagatcatcacttgttgctcaagtattggtccacagggtcaagagttcaaggcattggtttttgagttcatgcccaatggtagcttggatggttggattcatcccaagtcaagcaatctcactcctagcaatacactcagcctttcacagagactcaacattgctgttgatatctttgatgcactggattatcttcacaatcactgccagccaccaatcatacactgtgatctgaaacctagtaatattcttctatcagaagacaagagtgctaaggttggagattttggcatatcaagaatcctcccgaaaagtagtactaaaactcttcaaagttcgaaaagctcaattggaatcagaggttccattggttatattgcaccaggtagatttttttttttaaaaaaaaactgaacttcttacattaattcccataatccctccccctcctccctcatgggtgtggattggagtactggggcactttgtatttgttttacatgtggagggtacggttgacaactaactttgattgcaaacattgcagagtatggggaagggtctacaataaccagagcaggcgatacttacagcttaggcatattgttgcttgagatgtttactggaaggagccctactgatgacattttcagggattcaatggatctgcacaagtttgttgcagcttcttttcttcaccaacccctagacatagctgatccaacaatctggcttcatgaagaagaaaatgttgcagatgttaaaaatgaaagcataaaaacaagaattattcaacagtgcttggtgtctgttcttaggctcggcatatcatgctcaaagcaacaacccagagagcgaatgatgttggcagaagctgtatcagagatgcatgcaaccagagatgaatatctcaggtcttggatggtcggccatgaagaacatagcactgtgagctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0149700, RefSeq:Os01g0149700