Os09g0279400

From RiceWiki
Revision as of 07:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0279400| Description = Rhodanese-like domain containing protein| Version = NM_001069294.1 GI:115478327 GeneID:4346604| Length = 4019 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0279400

Description

Rhodanese-like domain containing protein

Version

NM_001069294.1 GI:115478327 GeneID:4346604

Length

4019 bp

Definition

Oryza sativa Japonica Group Os09g0279400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6432207..6436225

Sequence Coding Region

6432328..6432368,6432533..6432795,6433964..6434114,6434578..6434663,6435082..6435186
,6435266..6435339

Expression

GEO Profiles:Os09g0279400

Genome Context

<gbrowseImage1> name=NC_008402:6432207..6436225 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:6432207..6436225 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagttcttggtctatccactgccttctctcctcccagaggttcttgtatagctgtgaggatcaggcatggcgctaggtcagcaaggagcaacctgtccctgaggaggaggagcgccggcggcggcgccattggcgtccgtgccgaggtgagcttcgtcgacggcgacgaggcgaagcggctggtggcggaggaggggtacacggtgctggacatccgggaccggacgcagcgcgagagggcgcacatcaagaactcagcgcatgtgcccctcttcgtcgagaacgacgacggcgacattggaactattataaagcgcacggtacacagcaacttcgccggcctgttcttcgggctaccattcaccaaacggaacctagagttcaccaagatggtcaaggataagttctcgccggagagcaagctgctggtggtctgtcaagaagggctcaggtccacgggagctgctgatgtattggagagagaaggcttccaaaatctggcatgcatcaaatcagggcttcagacactgaagccaggaacatttgaatctgttggcaaaagtgagctgcaaaacgcagggaaagcaggacttgtgacggtgcaagggaagatttccgctgttcttggaactgtgttgataagtgcctaccttttcatcacattgttccctgaccaggctgaaaagctttttgacttggctggaatcaaattgtga</cdnaseq>

Protein Sequence

<aaseq>MAVLGLSTAFSPPRGSCIAVRIRHGARSARSNLSLRRRSAGGGA IGVRAEVSFVDGDEAKRLVAEEGYTVLDIRDRTQRERAHIKNSAHVPLFVENDDGDIG TIIKRTVHSNFAGLFFGLPFTKRNLEFTKMVKDKFSPESKLLVVCQEGLRSTGAADVL EREGFQNLACIKSGLQTLKPGTFESVGKSELQNAGKAGLVTVQGKISAVLGTVLISAY LFITLFPDQAEKLFDLAGIKL</aaseq>

Gene Sequence

<dnaseqindica>122..162#327..589#1758..1908#2372..2457#2876..2980#3060..3133#ctgtgctgtgcagccctgctgctctcttctccccctactccaaaaacttcacaaaatcaccccaaaaaagatccattctcggagcacaaaagaatcttttgcaaatttgtatcaaacaaaaatggcagttcttggtctatccactgccttctctcctcccaggtcagcaaaaaattcctctgccttcacttgttctgatttctgaacaagaatttatccatccatgcatcatataatctatgaaaaattctcatgattcgtttgttctgaacacgaatttatccatccattgcatcatatctaactatctgttttgtctttttcagaggttcttgtatagctgtgaggatcaggcatggcgctaggtcagcaaggagcaacctgtccctgaggaggaggagcgccggcggcggcgccattggcgtccgtgccgaggtgagcttcgtcgacggcgacgaggcgaagcggctggtggcggaggaggggtacacggtgctggacatccgggaccggacgcagcgcgagagggcgcacatcaagaactcagcgcatgtgcccctcttcgtcgagaacgacgacggcgacattggtaatactaatacaccactgctctctctctctctcagttcagttctagttttttatttttttttattttaaaaggccgaactatgtagattctgacaaataaagcagtcagattaaaggttaaatttactgtatgattattgcacccaatagaccagtacttcaaaaatatttcacaaaatggttttatcgctattaagaagatgtttatgaaaactgatggtcaaagtttaatatcattatgattgtcacataaataaaatgattggcacagtgataagagccttttttatcgctattaagatgtgacttctctaaaataaaatacttccttgttttcaaataaaagcatttcaagaattcagccaatcggatgcttagaagctcctggacatcctagaaacttattatatttcagaacgaaagtacgttatagaaccaacgaaggtagtattatatatgcactagaaattattattacaattttctcttaaaaaataaatactttatgtcggaatcaatcacaatatattgatccatttttatttagatgacgttgagtaaatttcataaaagcccaagtattaggaagacacacataacataaaactctaaccctagttattgtggtttgtttcaaggagtcccatgttttggggcaaaaagtttcaaaaaaaaccctatacttatgtaaaatacatatatttcattattacgtatgattattttttttcataaattcacattagttaactcaaatacacattcctctcacctagtttattttttcttaatttttcactgcaaaaaaactcaacataaccctaattgatgatgacataataattggctaaatatacacataaatgatcataccaagatgataagcgattgttgaaaagcagttaacgcgtatatgtactaagaaatatctcatattattttatagttattatagataaatatattagtcaaatagatgatataagcttatagttggggttttatgaaatattttgccccaaaacccgaggtttcacgaaacattacaaaaactagggttttgtgttgcgaatgctcaaaaacatggggttttatgaaatttgctaagaaaaaaaagggagttagtagatccttaaacttgctggccattttggtttttcttctaggaactattataaagcgcacggtacacagcaacttcgccggcctgttcttcgggctaccattcaccaaacggaacctagagttcaccaagatggtcaaggataagttctcgccggagagcaagctgctggtggtctgtcaagaagggctcaggttggtgaacagtgcagtagtcgacttttgtcatgccttttctgtattagcagtttcttcagaacaaactttaggtgtgtttacttaaattcagttagtcttcatatggcaacaacaatgcaaatatttatattactattataagacaatagtggtgatgatgaatctgccaccagctccatcactaacatgtgcgccatgaatgtcatgtttactctttgcattatactctctaggctgcaactttttaaaatttctaaacatggtatttttctttttttaagataaaagatcttgtttcaatcaaataaaaatattttttccaactagtacttatttttgttattttcaataacccgttacaacacactggcatttggcttggaacttaggaaaaacataatgtcacacaccagtttcagcagtttattggccttacccttcttttaactatatgttgaaggtccacgggagctgctgatgtattggagagagaaggcttccaaaatctggcatgcatcaaatcagggcttcagacactgaagccaggtacaaccaatttaaaattctttatgtaattaatagagtattaattgttcatgcaaagtgttccatattatgacataatggccgtgtttagttgtttggccaaattttttttggcatatacatacacacatttaaagtattaaacgtagactaataataaaacaaattacagattttgcctgtaaactgcgagacggatttattatgcataattaatccgttattagtaaatatttattgtagcaccacattatcaaattatggcgtaattaggctcaaaagattcgtttcgcaaactgtgcaattggtttttttcgtccacatttaatgctccatgcatgtgtccaaatatttgatgtgacggaatttttaaaagtttgaagggaactaaacacagcaaatgttttgcgtgtcgtaggaacatttgaatctgttggcaaaagtgagctgcaaaacgcagggaaagcaggacttgtgacggtgcaagggaagatttccgctgttcttggaactgtgttgataagtaagatgactggaactatttttatctgagataagtacgtcatgatcataaacttgtcttatgcgagtttcatctacaggtgcctaccttttcatcacattgttccctgaccaggctgaaaagctttttgacttggctggaatcaaattgtgatcagaattgtatctcttttcatgcattttggttctcctcttggggattcatgttcccattgcaaggtatgggattcttcatgatttcaagctcaatgtgtgcgtgcgatttttactattctgcatatctagggattagggatgcctttgtgcccagatcaaagatgttataatgactactgatgaatcggtttgcagctttctctctttataatcaaagaggttataaaattactttctttttgagaaaaaaaaacatgttactatttgatacatttatgacattttctgctctaattcaactactgaaccgaacagtacatggttatagcatttcgtttgacagcaacaatgaaaatgccttataacatattgcaattgcgaatcataaaatttcagattttttttcgctgatctttatcttcactgataaatttaagatcaactatgcatatccatcgatatgaaacataataagataaatgaattgatattgaatgaacttaatatttcaactagcaagccagaggacatgttcatgttttgatttcaacccatagaaatccattctcctatgatcatttaaaaccttaagtagctgaatgcaaactaatttcctgttttattgttttgctgcaggttaacttaggcggacttggggagatcttttcatgatgaaaagaaagttaggctcagtgtgtaatatgtagggaattgttggcatatccaaatgtatttcctcttgaatacattattttgctcgcatgcatcctctccttttccaattgtatgtttggtttatcgaatttttgttgttccgacaaaaaaattaggcccttgcagagtaatggttcaggatttcaagctgagcacagaatagaaagttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0279400, RefSeq:Os09g0279400