Os01g0151100

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Revision as of 04:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0151100| Description = HSP20-like chaperone domain containing protein| Version = NM_001048572.1 GI:115434557 GeneID:4324523| Length = 2824 ...")
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Gene Name

Os01g0151100

Description

HSP20-like chaperone domain containing protein

Version

NM_001048572.1 GI:115434557 GeneID:4324523

Length

2824 bp

Definition

Oryza sativa Japonica Group Os01g0151100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2764779..2767602

Sequence Coding Region

2765517..2767160

Expression

GEO Profiles:Os01g0151100

Genome Context

<gbrowseImage1> name=NC_008394:2764779..2767602 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2764779..2767602 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagagcccctcctcaccaccctgtccatggagaacaccaacagccatccctgcacccgcctctccatggatcccgccgggtcgcacgcggcctcgggtgactcctccggtggcggtggaggtggcggcagcaccggtgccggtggtggtggtggtggtggcggtggtgacagggaattgttcatcattccgcggcgtgaatctgcgcatccaggaccaccggacattaacctgcccctttctgcagacccctcaccaccaccgccgccgcatccgccgtcgtggggtatcgaccagttcgacatgcttgatgtcggtctcggcacgcagacttatgagtctgaggttgcgctcacgcttccaaagttgactggcaatggcaacactgcggttggcgtcggtgcgaggaagtgtgccaagaggggggacagcatttggggtgcatggttcttcttcaatcactacttcaaacctgcacttgtggaaaagccgaagggcaaggtgacacgggactcttctgggagcgtttcgggctttgagaagtctgatcttcgccttgatgtcttcctggtgcagcatgacatggagaacatgtacatgtgggtttttaaggaacggcctgacaatgccctcgggaagatgcagctccggagcttcatgaatgggcattccaagcatggtgagccatcctttccattcagtgcagataagggctttgcaaggtcacaccgcatgcaacgaaagcactatcgagggctgtccaacccacaatgccttcatgggatagagattgtgagttcaccaaatctgtcagctgttcctgaagctgaaatgaaaaggtgggcggaacttacaggaagagaacttaatttctcaattcctcctgaagcaagtgactttgaatcatggaggaatcttccaagcactgatttcgaacttgataggccactgccactgtcatcaaagattacacatggctctcacagtcacaaaaaggcactgaatggttcaggtcttaacctttctacgccaccatcatcagacgatgggatggacctttcaccaaaatgcgccaagcgacggaaggacttctttgctcatggtgcagatgaggattgcgtgatggcaaataattcttgttctgacagagagcaagagatagaagttcacacaggtgagccgtcatggatgcatgagttcactggtgtagcaaaacatgcaagtggacctgttacggctgccaagacaatatatgaggacgatgaaggctacttaatcatggtgagcatgctcttctctgatcctcacagtgtcaaggtctcttggaggaacacattgacacatggcattgtgaagatatcgtgtgtgagcactgctcgaatgccctttgttaagagacatgacaggacattcaagttgactgatcctttccctgagcactgccctcctggagaatttgtgagagagatacctttggctacaaggattccagaagatgcaaagctcgaagcgtattatgacgagactggcactggactggaaatcatggtccccaagcaccgagttggacccgaagagcatgaagtccaggtttgcatgaggcccccacaccttggtgaaaacgatcttcttttatcatag</cdnaseq>

Protein Sequence

<aaseq>MGEPLLTTLSMENTNSHPCTRLSMDPAGSHAASGDSSGGGGGGG STGAGGGGGGGGGDRELFIIPRRESAHPGPPDINLPLSADPSPPPPPHPPSWGIDQFD MLDVGLGTQTYESEVALTLPKLTGNGNTAVGVGARKCAKRGDSIWGAWFFFNHYFKPA LVEKPKGKVTRDSSGSVSGFEKSDLRLDVFLVQHDMENMYMWVFKERPDNALGKMQLR SFMNGHSKHGEPSFPFSADKGFARSHRMQRKHYRGLSNPQCLHGIEIVSSPNLSAVPE AEMKRWAELTGRELNFSIPPEASDFESWRNLPSTDFELDRPLPLSSKITHGSHSHKKA LNGSGLNLSTPPSSDDGMDLSPKCAKRRKDFFAHGADEDCVMANNSCSDREQEIEVHT GEPSWMHEFTGVAKHASGPVTAAKTIYEDDEGYLIMVSMLFSDPHSVKVSWRNTLTHG IVKISCVSTARMPFVKRHDRTFKLTDPFPEHCPPGEFVREIPLATRIPEDAKLEAYYD ETGTGLEIMVPKHRVGPEEHEVQVCMRPPHLGENDLLLS</aaseq>

Gene Sequence

<dnaseqindica>739..2382#attgttcccctcctccccttctctcccctctcctcctcgcttccggcgagaagctccggcgaggcgaagcctccagaaccttcaggagagctcctcaccgaagggacaaggggccttctagaaccttgctgcttcctcccccaaaggttagatcagagcaagggcagctgctctttcttctttctttcttcctcgtttgtcttcgtttccaccttccagcgaggattctttgtgtgtttaatgggattttcgaggtgtggtacggcttgattggagaaaatattgttgttttcgtgacgaaatttagtgaggtattgtggggaaatcgagtggcctttttagcgaaaggaagtgtttttttttacttgatctgtatttcgaggtatgtgtgcatcaacatgctgttaatttggtagtaagtctgataaattgcttttctttttttttgtctctggatttttctaggcttgcagcgctggattggctccgaagatcttaattttgctccaaaggaaggatcccccatcgcaaatcttgatctgtgggtggatttggtgggttgaaaactccatcttttatggggcaaggctatgcgaaatccttgatgctcccatggagttctcctcccatggggcaagaggtgaagaggcagtagatagaggaggagcaagaggtggaagcgaagagaagtaggtgagaataggaaggacgaaggataaggagaggagggagctctccatgggagagcccctcctcaccaccctgtccatggagaacaccaacagccatccctgcacccgcctctccatggatcccgccgggtcgcacgcggcctcgggtgactcctccggtggcggtggaggtggcggcagcaccggtgccggtggtggtggtggtggtggcggtggtgacagggaattgttcatcattccgcggcgtgaatctgcgcatccaggaccaccggacattaacctgcccctttctgcagacccctcaccaccaccgccgccgcatccgccgtcgtggggtatcgaccagttcgacatgcttgatgtcggtctcggcacgcagacttatgagtctgaggttgcgctcacgcttccaaagttgactggcaatggcaacactgcggttggcgtcggtgcgaggaagtgtgccaagaggggggacagcatttggggtgcatggttcttcttcaatcactacttcaaacctgcacttgtggaaaagccgaagggcaaggtgacacgggactcttctgggagcgtttcgggctttgagaagtctgatcttcgccttgatgtcttcctggtgcagcatgacatggagaacatgtacatgtgggtttttaaggaacggcctgacaatgccctcgggaagatgcagctccggagcttcatgaatgggcattccaagcatggtgagccatcctttccattcagtgcagataagggctttgcaaggtcacaccgcatgcaacgaaagcactatcgagggctgtccaacccacaatgccttcatgggatagagattgtgagttcaccaaatctgtcagctgttcctgaagctgaaatgaaaaggtgggcggaacttacaggaagagaacttaatttctcaattcctcctgaagcaagtgactttgaatcatggaggaatcttccaagcactgatttcgaacttgataggccactgccactgtcatcaaagattacacatggctctcacagtcacaaaaaggcactgaatggttcaggtcttaacctttctacgccaccatcatcagacgatgggatggacctttcaccaaaatgcgccaagcgacggaaggacttctttgctcatggtgcagatgaggattgcgtgatggcaaataattcttgttctgacagagagcaagagatagaagttcacacaggtgagccgtcatggatgcatgagttcactggtgtagcaaaacatgcaagtggacctgttacggctgccaagacaatatatgaggacgatgaaggctacttaatcatggtgagcatgctcttctctgatcctcacagtgtcaaggtctcttggaggaacacattgacacatggcattgtgaagatatcgtgtgtgagcactgctcgaatgccctttgttaagagacatgacaggacattcaagttgactgatcctttccctgagcactgccctcctggagaatttgtgagagagatacctttggctacaaggattccagaagatgcaaagctcgaagcgtattatgacgagactggcactggactggaaatcatggtccccaagcaccgagttggacccgaagagcatgaagtccaggtttgcatgaggcccccacaccttggtgaaaacgatcttcttttatcatagaacagaaaacagtttagtctttagatcttcctgtgtcatgccatgatatgcaggaaagtaacaagtgatgccatggatattttgctgctaaacatttagctgaaattcctttctcagtagtgttggtgatttaggcaaaaaagttaccactttgttgattctcccctgtactttttacactagcaccactatattggagatcttgatttctatggaacatggcaaagttaaaattctgtatatatatctgatgatcaagttcaacggttcattactccataataatgtcgacagctacttacgactagaagttcggaactgtgttgtcaatttcagcaattgtttgtaatcgctgtcttaatcatttcaatgtgctgtactacaatactactggctggatcgctttcaactgaaaccaaaaactcgatcccattgctgtact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0151100, RefSeq:Os01g0151100