Os10g0464400

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Revision as of 08:40, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0464400| Description = Haloacid dehalogenase/epoxide hydrolase family protein| Version = NM_001071329.1 GI:115482401 GeneID:4348834| Length...")
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Gene Name

Os10g0464400

Description

Haloacid dehalogenase/epoxide hydrolase family protein

Version

NM_001071329.1 GI:115482401 GeneID:4348834

Length

4677 bp

Definition

Oryza sativa Japonica Group Os10g0464400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17590364..17595040

Sequence Coding Region

17590877..17591053,17591148..17591231,17591310..17591461,17591674..17591769,17591851..17592005
,17592169..17592234,17592371..17592440,17592553..17592683,17593499..17593685
,17593788..17593863

Expression

GEO Profiles:Os10g0464400

Genome Context

<gbrowseImage1> name=NC_008403:17590364..17595040 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:17590364..17595040 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagctcccaagcccattgctcggcttatttcccatgtcattcttgatttagatggtaccctcttaaacacagactgtgttgtaagtcaagtgctgaaaccatttctagtcaaaaatgggaaaaagtgggacagcaagaaagctcataaattagttggaaagacaccttatgaggcagcagctgttgttttagaagattatggactcccttactcaacagaagaatttctctcaatgcttactccaatgttcaatgagcaatggtgcaacataaaagctcttcctggagctaatcggttgataaaacatttgaagagtaatggagtaccagctgctttggcttccaactcaccaagatcaaacattgacgcaaaaatttcctgccatcaaggatggaaagagtcgttctccgcaattgttggtggtgatgaagtagagaaggggaagccatccccagatatatttttggaagctgcaaaacgaatgaatacaaatcctccaaattgcttagtaatcgaggactccttaccaggtgttgcagctggaaaagctgcaggaatgcatgtcatagctgtaccttcagtccccaaaaggactgctgaattcagttctgctgatgaggtgatcaattccctccttgacgtaaagcctgaaaaatggggattgccaccatttagtgattggatcgatgataccttaccaatagaaccatggtttattggtggacctgtgattaaaggatttggccgtggttctaaagtactaggaattccaacagccaacttacctgcagaaaacttctccgacgtactatcagagcatacatcaggggtatactttggctgggctggactttcaacgcgaggtatatttaagatggtcatgagcattggctggaacccttattttgataacacggagaagactattgaaccatggttgcttcacgattttggtgaagacttttacggagaggagctgcgccttgttattgttggttacatacgacccgaggccaactttccttcacttgagagcttgatagagaggattcacgaggatgcaaggatatcagataaggccctgaatttaccattatacgccaagtataaagactcgccgtacctaagaaattccttgaaggaggacaattctgctaacgggaaccagtcagtgatagattccaagtga</cdnaseq>

Protein Sequence

<aaseq>MAAPKPIARLISHVILDLDGTLLNTDCVVSQVLKPFLVKNGKKW DSKKAHKLVGKTPYEAAAVVLEDYGLPYSTEEFLSMLTPMFNEQWCNIKALPGANRLI KHLKSNGVPAALASNSPRSNIDAKISCHQGWKESFSAIVGGDEVEKGKPSPDIFLEAA KRMNTNPPNCLVIEDSLPGVAAGKAAGMHVIAVPSVPKRTAEFSSADEVINSLLDVKP EKWGLPPFSDWIDDTLPIEPWFIGGPVIKGFGRGSKVLGIPTANLPAENFSDVLSEHT SGVYFGWAGLSTRGIFKMVMSIGWNPYFDNTEKTIEPWLLHDFGEDFYGEELRLVIVG YIRPEANFPSLESLIERIHEDARISDKALNLPLYAKYKDSPYLRNSLKEDNSANGNQS VIDSK</aaseq>

Gene Sequence

<dnaseqindica>3988..4164#3810..3893#3580..3731#3272..3367#3036..3190#2807..2872#2601..2670#2358..2488#1356..1542#1178..1253#attccgtcccaagtcccaccgtcccctcggcttatcccccctcctccccggcctccctccgccaaggccgccggagcccgtcgccggaggcagctgcagggaaggacgccgtcgccggacacatgcggggtaagccgcagccctcctgaacctcacctccaccgtggtcgcttcgctcgtccggtcctcccctccgccaggcgcgcccggggggtggggcgtacatcgccgttgatgccttccccgagcagcggggttggttcgcgtgcgttggcgggtgcgtgctcggtagctacgggaacgagagaggcgggtgggggggattggattagattgcgggatcgcccttgttgctcagacgtatagagtcgcctcacctctgcgcggtagctgttcggtgaaatgccctagtgtggtggggttgagccgggcgccccaagcgggcgaatttggcttcatgccaagtctgaggctgtctcgcagcaatctgttgctgctggttgcggacggttcagctcaccttggtagcatgggctggagggttattgtgcgtcatgccagtattttgcctttgccatcttgtagaattcagtctagtgctgatgacatggcctcatcatttagttcgtaaccttaattagtataaaccgagtgaacttatgtgaccagttgaggacagccaaaggagcaattttaaacacaatctcagcttgaaacaaagttccaattttacaacaaaatagcaagcccgcgtatatggaaatatgaagcatttaattgttccaattgtttcatgatcaccctaaacattgcttaatatgtatgtatactgattgcctgtgaacagtactcattttccatcaaagcttgaaaaccttgcttttaattctgatttcttactaatttagttataagaacatgttataaaatctgtttaaacctataaataattggaaatatgataatccattcttaaacacattactggactcaccttttatgttaaagcagcataattacttacatggctaccatatgagctacttaacatcaattttcttctatgggtacatctcattatcaatgtcatgttggcctgaatattttggcattttgtcaggttgggcttcccagatagcttgtctcttgctgcactaagctcttccaatttttaaaaatggcagctcccaagcccattgctcggcttatttcccatgtcattcttgatttagatggtaccctcttaaacacaggtgattaaaatgttgtaaatttgcttgcatttgtcattaacctttgcttggttcagttatctcaaattcatattttcttatcttgttttaaccatttggcagactgtgttgtaagtcaagtgctgaaaccatttctagtcaaaaatgggaaaaagtgggacagcaagaaagctcataaattagttggaaagacaccttatgaggcagcagctgttgttttagaagattatggactcccttactcaacagaagaatttctctcaatgcttactccaatgttcaatgagcagtactgttgctgaaacttcttaacactcatataacttgcattttgtaaattgcatactgccgtgctacctcaatggagaatctttgtacatttctctttggatattttaaattactgacatgtgtcctttatagaccacttctcaacagtatcccccaaaatgttgcctcgagaaatcttaaatcatctcttcctttggtgcacctaaatcacctatgtttgcatctgcacataatatgcatcgacacgccatgctctgatgaatttggtgccaaatgattcatggaaataatagtaatataaaatgtcaccagtaggttggccttacacattcctctatagtttattagcatggattccaatttttctaccttactctatgaacaagcatctagttgttatggaaccatgtcaaaatgtcaatgccaagtaggaagtatgtctgtttttttgtatagcatttgtttgaaataatgaaatgcaagtttcactttgtaagtcactgtgtaagaaactacgtatgctgtcactaaatagccggatttcttataatatctggtttgttaagctccttcgattcaagttgaacatgaaactgaacttccgtatggtgcagagaagtactttatataaatggagaagaattgttcaatgtgtaacatagtaaagccctttatgcagattttattttaaactgaagttttggaaagattgtattgttcaaaagataaaattttcatgttgtaatgtgcaaagaagattgtatagaaaaagggaaaaaatatcgtgttctcataatgaatttcatattgcagatggtgcaacataaaagctcttcctggagctaatcggttgataaaacatttgaagagtaatggagtaccagctgctttggcttccaactcaccaagatcaaacattgacgcaaaaatttcctgccatcaaggtaaccctctcatactttagggtaaaattttttcctgaatttgcatgctattttctttgattttgtggacagatatatcatatattaattactgtattctcaccatgtttaggatggaaagagtcgttctccgcaattgttggtggtgatgaagtagagaaggggaagccatccccagatatgtaaggctgtgtgctatgtagcattttcgttactggtactttatggatcttttgaactcatctcatatcatttcctttgctttgatctgcttttgttccgacattccttaaaactgctggggtgttgatattcaagatttttggaagctgcaaaacgaatgaatacaaatcctccaaattgcttagtaatcgaggactccttgtaagtttttttcctgttatgtatggttctcctgtgtgcaaatttgcactgcatgattagctgtgtacattttatcttgatctacacttaaacataactgtgcatattctacttttctcttcacaactttacctttaatactgtaagttattgattgtgctagaccaggtgttgcagctggaaaagctgcaggaatgcatgtcatagctgtaccttcagtccccaaaaggactgctgaattcagttctgctgatgaggtgatcaattccctccttgacgtaaagcctgaaaaatggggattgccaccatttagtgattgtatgctctaactcttgggactacttctgttagaaaattctgggcatctttaacttatctactgacatatttcttatgcagggatcgatgataccttaccaatagaaccatggtttattggtggacctgtgattaaaggatttggccgtggttctaaagtactaggaattccaacaggtatggtggagcatataactagagagtaatttatgagctctacggcttttgtggttttacattctatgaattgcaagaatgatttttctcatatggtgtgttactctctttatttgctggaccatgtcaaagtactcagccgattcattttttcaatgctagcatgccgaatttccattgtgagcactgatagctatatattttccttgcagccaacttacctgcagaaaacttctccgacgtactatcagagcatacatcaggggtatactttggctgggctggactttcaacgcgaggtatatttaagatggtcatgagcattggctggaacccttattttgataacacggagaagactattgtgagtgtttctcaatacatcccctttcatgtttagtacttcagtatattagtttattctaaaagacattggtcacaggaaccatggttgcttcacgattttggtgaagacttttacggagaggagctgcgccttgttattgttggttacatacgacccgaggtaatttaggaccagactatttatactgcagaagccatcccactatatgttgatgcatgttcctgacttgtcacgttgttatgaaaatgcctaggccaactttccttcacttgagagcttgatagagaggattcacgaggatgcaaggatatcagataaggccctgaatttaccattatacgccaagtataaagactcgccgtacctaagaaattccttgaaggaggacaattctgctaacgggaaccagtcagtgatagattccaagtgattcaacgttgtgaagtgaaagacatgaagaattctctttcgcagcgttgttgatgcagaaagagcactactgttcttgtgcttgtactgctgcattatgttccatgaatacttggaacatgctcttgactacaatgagaataccagtaagggtctatgttcgtcagaaagttgagttagaagcagccaactactatcttctcaaatggtcacctactcctagaatggaatgcacaagatgtctgaaaatttgcacgtgtgttgtggctctgaccatgtgaagcttaggctgtctatctaacgttctgaattaacttttctaatatgcattgagattggtatttcattacagtgtgtataaagatatactataaagtactactccattctagaaaaatgcaaatcctagctacgaacctggacacgcatatgtttaggctcatagctagaattggattctttttggatggaggggtagaaagcaaataaagctcggttattgttggttaccagc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0464400, RefSeq:Os10g0464400