Os01g0151700

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Revision as of 04:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0151700| Description = Similar to Short-chain dehydrogenase Tic32| Version = NM_001048577.1 GI:115434567 GeneID:4324493| Length = 3186 bp| ...")
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Gene Name

Os01g0151700

Description

Similar to Short-chain dehydrogenase Tic32

Version

NM_001048577.1 GI:115434567 GeneID:4324493

Length

3186 bp

Definition

Oryza sativa Japonica Group Os01g0151700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2799516..2802701

Sequence Coding Region

2799748..2799865,2800890..2801121,2801242..2801321,2801417..2801570,2801655..2801733
,2801900..2801984,2802121..2802167,2802301..2802471

Expression

GEO Profiles:Os01g0151700

Genome Context

<gbrowseImage1> name=NC_008394:2799516..2802701 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2799516..2802701 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcatcttgtcgctcatcaccgggaaggccggcgcgagcgggttcggctccgggtccacggcggagcaggtcaccgccggcgtcgacgccaccggcctcaccgtcatcgtcacaggaggagcgagtggcattggtctggagacctcgcgagtctttgcgatgagaggagcccatgtcatcatcgcagcaaggaacacagaggctgcatctgtagtgaggaagaaaatcattgaggaaaacccaaaagctcacatcgatgttctgaagcttgacctcagctcccttaagtctgttagagcttttgcagatcagttcaactcgatgaaccttcctctgaacatcctgataaataatgccggtgtgatgttctgtccgtttggattgtctgaagatggtgttgagatgcagttcgcgaccaatcatcttggtcactttctgttgaccaacctccttcttgataatatgaaagcaaccgcgaagtccacaggtattgaaggtcgtattgtgaacttgtcatcggttgctcacctccatacatatccgaagggaattgagtttgataaactcaacgatgagaaaacatacgatgacaagatggcttatggacaatctaagctggcaaacatacttcacgcgaaagagctctctagacggctgaaggaagaaggagcgaacatcactattaactgtgttcatcctggattgatcatgaccaatttgatgaggcactcctttttccttatgagggtgcttcaatttgccacctacatcttgtggaagagcgtaccccagggagcagctaccacttgctatgtaggactgaaccctcagctcaagggagtgaccggacaatactttgctgactgcaatgtggagaaaactagcagatttgcgaggaatgacgcgctggcgaagcaactctgggaattcagcgaaaagctgatcaagtcttcttcaaaatga</cdnaseq>

Protein Sequence

<aaseq>MGILSLITGKAGASGFGSGSTAEQVTAGVDATGLTVIVTGGASG IGLETSRVFAMRGAHVIIAARNTEAASVVRKKIIEENPKAHIDVLKLDLSSLKSVRAF ADQFNSMNLPLNILINNAGVMFCPFGLSEDGVEMQFATNHLGHFLLTNLLLDNMKATA KSTGIEGRIVNLSSVAHLHTYPKGIEFDKLNDEKTYDDKMAYGQSKLANILHAKELSR RLKEEGANITINCVHPGLIMTNLMRHSFFLMRVLQFATYILWKSVPQGAATTCYVGLN PQLKGVTGQYFADCNVEKTSRFARNDALAKQLWEFSEKLIKSSSK</aaseq>

Gene Sequence

<dnaseqindica>233..350#1375..1606#1727..1806#1902..2055#2140..2218#2385..2469#2606..2652#2786..2956#gctcccgcctcccgcgcccgcgcattgaacaactcgtcgatctgtccggcgagggtgagtgcttcttggcgtgttcttttcggcgacttcttgttgggggggggggggggggggtcgaattcagttgcgttgcggtggctgagcttctttgcgtgttcttgtttgggttttggggttggggggtgcagtgttggatcgtgagtttgggggtttcttggcggcgtggtttgagatgggcatcttgtcgctcatcaccgggaaggccggcgcgagcgggttcggctccgggtccacggcggagcaggtcaccgccggcgtcgacgccaccggcctcaccgtcatcgtcacaggtaagagacagagctgcctgcttccgtacctccgaatcttggaatttatttctctgcaatgtgttgttgtggccagcaaaaacctgttcttgaaaacatcaatgcagtttatttttaatggttttggttagtttcttgccatgtttttgttagatttgtgagaaactcgtgtgaataatctccaattctctacccgtcaccaactcaccataggcagtctctgcatctctctctctctctctctctctctctctctcaaattgttctctcttttcctttttgggtgtgttttggatggtggtaagggtggcttagagttgggattatgaaagcagccaccttttgtgttatgattaatataatatcaaaataatactacgctcttcaaaaaattgtatatgagaaatttatgcataagtagcttttttgtggaccagaagagtttattatgttttgatgaaagtttgtctgtttcctgctcaatcttgtggttgtggtttagatttctggaactttcttgactacagagaattcataattcaatcaggtattttagataatactaaaaaaacaaaaacatagattgatatacagaagtgtgaaggaaaatcaattcatcggaagggcatagcagttcttccattctgacaatgggctgaggatttttaccctctctttcctgatgtggagatgttggatattcctttctttttgtgtggaaaataagagtttgagcttggaactgtgtggtcttaaactataaacattttcccattatataatagtaactttttctgtgttaggtcttgtcaattaaacttgctcataaaagcattaatcatagtcttctagtgcatccataaccaatctgtcatagaattcagttttcaccaaacatcaatcttgtattcttgtgagtaaatttcatgttgtgtcagactcacagtagctagttactgcaaactgttcataaacatctatcctcgcaaatttacggaaatctgtaaattctgttgtcttacaggaggagcgagtggcattggtctggagacctcgcgagtctttgcgatgagaggagcccatgtcatcatcgcagcaaggaacacagaggctgcatctgtagtgaggaagaaaatcattgaggaaaacccaaaagctcacatcgatgttctgaagcttgacctcagctcccttaagtctgttagagcttttgcagatcagttcaactcgatgaaccttcctctgaacatcctgatgtaactcccttcaaactcttagcacacttgcctttttttaacatgcaaagatcctttggttctgcttaaatttcagttaattaaggggtctcatatattctttttttttccgtcatgcagaaataatgccggtgtgatgttctgtccgtttggattgtctgaagatggtgttgagatgcagttcgcgaccaatcatcttggtattcactctctaccactatcaactatttactttaaacatgcaaaaagtgcttggatgatactgatatctgtctgatgtgttatgctcaatcaggtcactttctgttgaccaacctccttcttgataatatgaaagcaaccgcgaagtccacaggtattgaaggtcgtattgtgaacttgtcatcggttgctcacctccatacatatccgaagggaattgagtttgataaactcaacgatgagaaaacgtatgtgctgagtgttttcatgttgtttttctgttggaaaatttatgtggattagagattgaaataagaattttgtattggcagatacgatgacaagatggcttatggacaatctaagctggcaaacatacttcacgcgaaagagctctctagacggctgaaggtattttcttccctcattctcacctttatttgtgatgtctttattcagattaacagagctgaaaactctatgcatttcccatttttctataaaacacatttaattttgtctattttccatcactaattcaccaatacatgtttgatctgtgccattgatgaaacaggaagaaggagcgaacatcactattaactgtgttcatcctggattgatcatgaccaatttgatgaggcactcctttttccttatgagtacgtatatgcaagttctctctttctgagtcattgttctagagtttttgctatggaccttcaggcttcgattgaaaagagaatgctgtttcctttccttaatgttctgaaaaaaacactttgttttcacttgcaggggtgcttcaatttgccacctacatcttgtggaagagcgtaccccaggtttggaacccaatatcttctctgttcttctttctgtccgaattctctgcagcaatgctgaaagacaaattgaattgtcttgaaattcaaattcatctgaaacaacacacttaacaaatgtttcttttttcagggagcagctaccacttgctatgtaggactgaaccctcagctcaagggagtgaccggacaatactttgctgactgcaatgtggagaaaactagcagatttgcgaggaatgacgcgctggcgaagcaactctgggaattcagcgaaaagctgatcaagtcttcttcaaaatgagagcccaaagcaggatcatcagcagaaaaaagaagtgttctgatactgtttggtttaatggcatactagtatgtgatgattgataaatatgtgtagcagcagtagtattaggaacctgaagtattctgaacccttttctaatgtttccttcggtcatggctgagaatgagatcaacctgtgtactcttgttaatatatttgccaaatacatgagttgttcagcagttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0151700, RefSeq:Os01g0151700