Os01g0151900

From RiceWiki
Revision as of 04:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0151900| Description = Protein prenyltransferase domain containing protein| Version = NM_001185257.1 GI:297719648 GeneID:9270198| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0151900

Description

Protein prenyltransferase domain containing protein

Version

NM_001185257.1 GI:297719648 GeneID:9270198

Length

2567 bp

Definition

Oryza sativa Japonica Group Os01g0151900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2804586..2807152

Sequence Coding Region

2804640..2804703,2804911..2806451

Expression

GEO Profiles:Os01g0151900

Genome Context

<gbrowseImage1> name=NC_008394:2804586..2807152 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2804586..2807152 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgccgcgggcgtccgccatcctctccgccgcctgcaggtccagcaggacgctcttcgttattaggaggctcggcttccttggttcctgcacgccaactgttcgtcagaatgcctcagtggagcttcccggggcaggcttatatccacgctttcaccagagcattctcccaattcactgcgttgttggatctctacggctttgtcattctaccgctttggatggttccaaggatgtccatgtcagcgaaatcgttaaaatcctcaagtctagagatggcgacagtgagctcgccgaagttctcaatcaatttgcagacgagatggatgaggatgttgtgctaaaggtgctccagaagcagaggtccaattggaaagtcgcactatctttcttcaaatgggcagctggtctgccccagtataaccatgggtcaagggcctacacggagatgcttgacattcttgggaggatgaagaaggtcaggctcatgagacaactgtttgatgagattcctgtggagagccgccagtcagtggtcacaaacaggatgtttgctgtcctgttaaaccggtatgcaggcgcgcacaaggtgcaggaggcgatagatatgttctacaagaggaaggattatgggtttgagcttgacttggttggattccagatacttttgatgtctctctgtcggtacaagcatgttgaggaagcagaggccctctttctccaaaagaaagatgagttccctcctgtcataaagagctggaacatcattcttaatggttggtgtgtcaagggaagcttggcagacgctaaaagggtttggaatgagataattgcgtctaagcttaagcctgacctgttcacctatggtacattcataaattcgcttacaaaatctggcaaacttagtactgcagtaaaactatttacaagcatgtgggagaaagggatcaatcctgatgtggcaatttgtaattgtatcatcgatcaattgtgcttcaagaaaaggattccagaagcacttgagatttttggtgagatgaatgatcgtggttgtcaggccgatgttgctacctacaacactttgataaaacacttctgtaagattaatcggatggagaaagtctatgagcttttggatgacatggaggttaagggcgtctctccaaacaatatgacatactcctacattctgaagacgacagagaaacccaaagatgttatttcattgatgcagagaatggagaagtctggttgcagactggactctgatacatataacttaatattgaacctttatgtcagttgggattatgagaaaggggttcagctagtatgggatgaaatggagaggaatggatcaggcccggatcaacgatcatttactataatggttcatggactccattcccacgataaactggatgaggctttgcattattatagaacgatggagtcgagagggatgacaccagaaccaaggacgaagctattggtaaaagcaatacgtatgaagaaagatgaacctgctacagaagaacctcttaccaggaagaatctaaaattggatccaatttcaagactattccatgttcgtaaatag</cdnaseq>

Protein Sequence

<aaseq>MPPPRASAILSAACRSSRTLFVIRRLGFLGSCTPTVRQNASVEL PGAGLYPRFHQSILPIHCVVGSLRLCHSTALDGSKDVHVSEIVKILKSRDGDSELAEV LNQFADEMDEDVVLKVLQKQRSNWKVALSFFKWAAGLPQYNHGSRAYTEMLDILGRMK KVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDL VGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLADAKRVWN EIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCF KKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNN MTYSYILKTTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEM ERNGSGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGMTPEPRTKLLVKAIRMKKD EPATEEPLTRKNLKLDPISRLFHVRK</aaseq>

Gene Sequence

<dnaseqindica>55..118#326..1866#gagagcgctctggtacccgttccctccgccgctctcgtgctcatctccggtacgatgccgccgccgcgggcgtccgccatcctctccgccgcctgcaggtccagcaggacgctcttcggtaggcaccacctgcaccgactccccttcttcttttttttttctttttctcttggccccttctgatttttttcatcatctcttgatgagtccatcacaccgcgcactgtttcattatctgaatttgaatgcatatactgaagtggaacgaggtttcgttctctgaatttaagtgcggggtactaatttaaactttgttcatgcgtagttattaggaggctcggcttccttggttcctgcacgccaactgttcgtcagaatgcctcagtggagcttcccggggcaggcttatatccacgctttcaccagagcattctcccaattcactgcgttgttggatctctacggctttgtcattctaccgctttggatggttccaaggatgtccatgtcagcgaaatcgttaaaatcctcaagtctagagatggcgacagtgagctcgccgaagttctcaatcaatttgcagacgagatggatgaggatgttgtgctaaaggtgctccagaagcagaggtccaattggaaagtcgcactatctttcttcaaatgggcagctggtctgccccagtataaccatgggtcaagggcctacacggagatgcttgacattcttgggaggatgaagaaggtcaggctcatgagacaactgtttgatgagattcctgtggagagccgccagtcagtggtcacaaacaggatgtttgctgtcctgttaaaccggtatgcaggcgcgcacaaggtgcaggaggcgatagatatgttctacaagaggaaggattatgggtttgagcttgacttggttggattccagatacttttgatgtctctctgtcggtacaagcatgttgaggaagcagaggccctctttctccaaaagaaagatgagttccctcctgtcataaagagctggaacatcattcttaatggttggtgtgtcaagggaagcttggcagacgctaaaagggtttggaatgagataattgcgtctaagcttaagcctgacctgttcacctatggtacattcataaattcgcttacaaaatctggcaaacttagtactgcagtaaaactatttacaagcatgtgggagaaagggatcaatcctgatgtggcaatttgtaattgtatcatcgatcaattgtgcttcaagaaaaggattccagaagcacttgagatttttggtgagatgaatgatcgtggttgtcaggccgatgttgctacctacaacactttgataaaacacttctgtaagattaatcggatggagaaagtctatgagcttttggatgacatggaggttaagggcgtctctccaaacaatatgacatactcctacattctgaagacgacagagaaacccaaagatgttatttcattgatgcagagaatggagaagtctggttgcagactggactctgatacatataacttaatattgaacctttatgtcagttgggattatgagaaaggggttcagctagtatgggatgaaatggagaggaatggatcaggcccggatcaacgatcatttactataatggttcatggactccattcccacgataaactggatgaggctttgcattattatagaacgatggagtcgagagggatgacaccagaaccaaggacgaagctattggtaaaagcaatacgtatgaagaaagatgaacctgctacagaagaacctcttaccaggaagaatctaaaattggatccaatttcaagactattccatgttcgtaaatagttcatcaatagattatactccagttgggggcttaggtttatgggctgaccaaatctagcctaagaatgtccagctagcccaggtttatgcagctgtgaagatgtcaatttgttggatattctaggagtttcatggctgaatgtgaggcattgagtagggtgtgccgctgttacttaataaagatagtcactttttgctcaagcattgacttccaaggtcaatgattcaacagcactggcctagcagtcttaagtatatgcctcatggtaaattgggtaattgcatcagaaatgtgtcaagactccaggcaataccctctgtctagctcagagacagggcattactgttgacgccacagatgcactggagtatctttaccaccactgtcagctaccaatcatccactgtgatctgaagccaagcaacattattgttcagtggacatgagcacacatgttggggattcagcgtgtcaaaaattctttctgaaaatacaagcaaaactttgcaatcagttcaattggaattagatgttccatcagttatgttgatccaagtaacagagatccatgcgttggtctcattatttttagatctttcttgatacatggatgtggtatcctgacatactccccccttttcttgtcaccttgtttgcatcaggttttatagtcaaactggtaaacctcaaaattgaaggg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0151900, RefSeq:Os01g0151900