Os10g0465000

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Revision as of 08:41, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0465000| Description = The start codon is not identified.| Version = NM_001071331.1 GI:115482405 GeneID:4348836| Length = 4849 bp| Definit...")
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Gene Name

Os10g0465000

Description

The start codon is not identified.

Version

NM_001071331.1 GI:115482405 GeneID:4348836

Length

4849 bp

Definition

Oryza sativa Japonica Group Os10g0465000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17615335..17620183

Sequence Coding Region

17615635..17615817,17616389..17617036,17618542..17618664

Expression

GEO Profiles:Os10g0465000

Genome Context

<gbrowseImage1> name=NC_008403:17615335..17620183 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:17615335..17620183 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cacatccatgcctgtttgcagatattatgtggtcataacaatgaagtttggtttgtaaggttctcaaatgatggaaactatctggcatcatcttcaagtgattgcacggccatcatatggaaggtggaagaggatgatacattaaccaagaagcactgcctcgtgggtcacaaaaatccaatttcttttgttgcctggagcccaaatgacagaatgctgctcacttgtggtaatggagaatcagtaaaactgtggaacgttgctactggtgaatgcagtcttaaatttagcagctcagttggccatattatcaattcatgtgcatggttccctaattcggagaaaatagtatgtgccagctgtgagcctgaaagttctccaaagaggatcttcacttgtgacctagaaggtcaagaactggaatcatgggttggagatagaatacctaaagtcagtgatatagctgtgactcctgatagcaaacatcttatctgtgtatgttccaatgaaatttggattcgagaacttccaaaggggcgggaatggagaatacgtgagcagcagacgatttcgtcgctatctctctctggtgatggacaatcactgattgtcaacctcaacagccaggaaattcatttgtggagaatcagtgaaagttctactgcggcggataataaattcaagggacacaagcaaggaaagtttgtgattagatcttgctttggtggatcaaactctctgttcatagctagtggcagtgaggattcccaggtctacatttggaaaaggcacctggagacgccaataaaggtcttatacggtcattcacttactgtaaattgtgtgagctggaatcctgctaagccacatatgctggcttcggcaagtgatgaccgcacagttcggatttggctagcacacaaaggctcacatcgcacacggttgacggcttga</cdnaseq>

Protein Sequence

<aaseq>HIHACLQILCGHNNEVWFVRFSNDGNYLASSSSDCTAIIWKVEE DDTLTKKHCLVGHKNPISFVAWSPNDRMLLTCGNGESVKLWNVATGECSLKFSSSVGH IINSCAWFPNSEKIVCASCEPESSPKRIFTCDLEGQELESWVGDRIPKVSDIAVTPDS KHLICVCSNEIWIRELPKGREWRIREQQTISSLSLSGDGQSLIVNLNSQEIHLWRISE SSTAADNKFKGHKQGKFVIRSCFGGSNSLFIASGSEDSQVYIWKRHLETPIKVLYGHS LTVNCVSWNPAKPHMLASASDDRTVRIWLAHKGSHRTRLTA</aaseq>

Gene Sequence

<dnaseqindica>4367..4549#3148..3795#1520..1642#atttttgacccctttttgttactctcttgaagttttgatttgatccgctcggaaatttgatcttcttttgtgttcggaactcggatttttgagggggttttggtcttggcggctgcttggggtgtgagatccctcaagctggcgaagcgaatcagccgtgtccatggagatgcacgcgagctctgtctcttcccatggcgaggcccggctcggcggcgagcgggggctcgtggaccgggaggagctggtgcgcgtcatcgcgcagtcgctctactcgctcggttaccggagggcggccgcggcgctggaggcggagtccggcatgccgctgtacccggcggagcacgaccgcctcctgttcgacgtaatgtctggccggtgggacgcgtgcgtggcggcgatccgcgccgtggcgggcctcggggaccgggagcgcgcggcggcggagttcttggtgtggagggggcacttcctggagcttctggggatcggcgacgctgggctgccgcgcgccagggaggtgctctggcgccggattgcgcccctcggcgttgacagggagtgtgtgcactggctggcacgcgcaatggtctcgtgcgagggggcggtcgcgccggatgccgtggtcgggtggaggattgggcttttcttggatctggttgatgctttcccgccatggttccatgtgccaagcggtcggctagagcttctggtggagaatgcagttgttaagcaggtttcgtcttgtgtatatcacaatttaccggacgaggtcactttgtttgaggatcataagtgccctgaagagcagattccttccaagtgttcgcaggtgcgagtttaaattgttgatttgtattaccagttttgcacaaacaccccagttataaggtttataagtatgtgaaatcagatcaatttcaaaaactagagccgacaatgtacaatttttatgctggcaattgttctgactagttttcagaacgtacttctgtatggttatctaactcagtaactcgaatattcactgtaattttttcaatatatatgcagcttttatcctttccgtgccaatgtttggaagcataaaattatcatgctaccgggagacactactcttcaaaagtactgcatattctctagccccagtgaggcagggatttgcattatttaagagtctttgcacttgaaatctcggttttgttttgaaagatagaaacactgtaaacagcaccacttcaaacctttcttttctactctgctttcaaactatgttttatctgcttgtgtagaggtcttctgtggagttctgatttttcaaattctgttatattctaaaagaaatgatcataacttgagatacttcaaaaccaatgataataatgttattagattcttttttagccaagaggggattactattcaggtaaactcatttatgtattctttcagggatctatagcactagacaagtttcatgcttgggggcggggactatagtccgaagatggatatttgacacatccatgcctgtttgcagatattatgtggtcataacaatgaagtttggtttgtaaggttctcaaatgatggaaactatctggcatcatcttcaagtgattgcacggccatcatatggaaggtatgcctttcaccaaagcagctgttaacaatgcttttcactattgttgtttcagaatacgacttacaacttggtcttcttaactctaatggttataagtcaactcgtttttaatatataaaatatcttataactttaaccacttctggaccacaacattcagactaactccatgcaaaacatagcatgcattccacatgacccatcctccataatccatacttggtaatggtttaactcacatagagaaagctattggagaacagaacaagccatgcattccacttaacccatcttccataatccatacttggtaatggtttaactcacatagagaaagctattggagaacagaacaagcctgattgattagagaatgcaacatccctcaatctagccttgtgccaaagtgtgatatagactccccaattcctgttgctgctaatcttctcttgtacctccatcaaagctcttttccctctccaccataggaagaggaatggaggaaaggagaagaagcttgaagtttccaataatgtgggccagcaactattgactgaggtatgactgtcttttcgggaaaaaaacatctgacagcttccaatgacttaacggcagctgaaactaacaggtttaatgggagtggtgcaaaaaggataaatgttgaaacttagtggtatggaagaaaacataaatttctagtgctataagatattttatagaaagtatatgccttttatacgatacgtgcaatcatacattttaaactttgtccactgatgagcggagctatttttcccctgtgaaactgacacatatactttatgagaaatcccttcataatgtaaatctttatttattaaaaatgttaccagaaaaatttgatatgaatttttaagtattggatactatggtaaatgtctgaaatgccaaataggggtaagcttaaagtgcatttcctgccagtcaccacatacaacttatgtccacggaaaagtttatcaatgatgctcgtgaaaggtcatatatatatatacctgtcttcatttgtaattggactttatttgtacaagtcgagctcgggcagaatttgtttttacatcttagtccacaaattgatgacattgtacagtccttgtgtacacatttgaagatgtggtacatgcctaaaagtgttgttaattttccatgttctagtaatcacagaggccacatattctaagctagatgggagatgttttttaagtatgtgaatgggaaaatccattcgttagtaggtgaaggcacctctgaggtggggtattacagctgttctaaagttacaaaggatgacagataatatgcattctttaactatcgtttggctaaaatcattttttttccttctcttccttgctgtttcttactggcaagtggcaacccaggtttgatggttcataatcatttgtttccttgctttacaactccaaattcttgtcatgcctaacccccaaagatgattttaggtggaagaggatgatacattaaccaagaagcactgcctcgtgggtcacaaaaatccaatttcttttgttgcctggagcccaaatgacagaatgctgctcacttgtggtaatggagaatcagtaaaactgtggaacgttgctactggtgaatgcagtcttaaatttagcagctcagttggccatattatcaattcatgtgcatggttccctaattcggagaaaatagtatgtgccagctgtgagcctgaaagttctccaaagaggatcttcacttgtgacctagaaggtcaagaactggaatcatgggttggagatagaatacctaaagtcagtgatatagctgtgactcctgatagcaaacatcttatctgtgtatgttccaatgaaatttggattcgagaacttccaaaggggcgggaatggagaatacgtgagcagcagacgatttcgtcgctatctctctctggtgatggacaatcactgattgtcaacctcaacagccaggaaattcatttgtggagaatcagtgaaagttctactgcggcggataataaattcaagggacacaagcaaggaaagtttgtgattagatcttgctttggtggatcaaactctctgttcatagctagtggcagtgaggattcccaggtatagctttcttatggaatttaatattgcatttggccttagctgcctcgtcctgacttttttcgtagatcatatgattgtatatacatatacaacataaccaccctcccaagcataagcgtacattgagaataaggagtggcgcatatagagcagcggtaccttgtaacttggttcttggtactctttcaaggttcctgttctatgaggaaacattgtaaacattgcaggctcactgataatgtccacatggcctctttaacatagcactaaaccttacattcaattctggcttaactgaaatatcaataatgttgaaggtcctactaggttgattagcattgtttggtttgcggtccttaatttatctgaaaatagatttgctcttgttaactccgcagtgtgtttgatagttgacatttcctagtggaggcacataattcacatcgttaggcatggacctatgtacaagattctgtgaacagcaaaaataaactgaaattagctagtacatggatttctgctcttgtcaagccttttccatctttttgatgtgccaaaatgatgacaggtctacatttggaaaaggcacctggagacgccaataaaggtcttatacggtcattcacttactgtaaattgtgtgagctggaatcctgctaagccacatatgctggcttcggcaagtgatgaccgcacagttcggatttggctagcacacaaaggctcacatcgcacacggttgacggcttgatgtggaaagttttgtatgttttccttgtaaatatatagttgtacatcttgactgtagtagtgtagtgtgcacagagcagttgagattttttttccccgtagagcttttagctacttcagaggtaaactttgaacaggcagaggcccagaagtagcagtatacttcatatatatgcctgtctcggattaaagttttgctcgtctactctgtaaagaatcaaagatgcatcagaattcagaaccttgtatatttttgtgagttgctactcattggtattgatatgtctggatgactggatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0465000, RefSeq:Os10g0465000