Os01g0158200

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Revision as of 04:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0158200| Description = Similar to Serine carboxypeptidase II-1 precursor (EC 3.4.16.6) (CP-MII.1) (Fragment)| Version = NM_001048611.1 GI:11...")
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Gene Name

Os01g0158200

Description

Similar to Serine carboxypeptidase II-1 precursor (EC 3.4.16.6) (CP-MII.1) (Fragment)

Version

NM_001048611.1 GI:115434635 GeneID:4324053

Length

2718 bp

Definition

Oryza sativa Japonica Group Os01g0158200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3053481..3056198

Sequence Coding Region

3053558..3053939,3054028..3054123,3054217..3054309,3054432..3054517,3054633..3054896
,3055076..3055203,3055306..3055401,3055580..3055685,3055778..3055942

Expression

GEO Profiles:Os01g0158200

Genome Context

<gbrowseImage1> name=NC_008394:3053481..3056198 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3053481..3056198 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggccgccgtgctcctggccgccatcctactggcgctgtcccctctccccatgtccctctccgccggcggcggcggcggaggtgacactggcacggccgaggcggccgcggaccgaatcacggccctgccggggcagccacgggtcaacttctccatgtactccgggtacgtcaccgtcgacgcggccgccgggcgcgcgctcttctactggctcatcgaggccgccgacccggcgtccgcgccgctcgtgctctggctcaacggcgggcccgggtgctcctccgttgggtacggcgcgtccgaggagctcggcgcgttccggatcaaccccgacgggaggtcgctctacttgaacccctacccctggaacagagtggccaacatgctgttcttggactcccccgccggcgtcggctactcctactccaacaccacctccgatctgttcactgctggtgataacaagacagctcatgattcatatgctttcttggtgaattggttggaacggtttccgcagtacaagtaccgtgatttctacatcgcaggcgagagctatggagggcactatgtccctcagttgtctcagctagtgtaccggaataacaaagacgttgaaaagcctatcctaaactttaaaggctttatggttggaaatgcggtaatcgatgattaccatgactacgttggcacatttgagtactggtggacacacgggctgatatctgatgatacatatcagaagctgcaggtggcctgtgattttgaatcatctgctcacgcatcagaagcatgtaacaagatttatgaagtggctgaggctgaacaagggaacattgatgcatacagcatctatacgcctacctgtaaaaaaacttcatttctcaaacgcaggttaataaggggtaactcgccatggttgcctagaggatatgatccctgcactgaaaagtactctacgaagtactacaacctaccagaagtgcaaaaagcatttcatgccaatgtcactggaataccgtatgcctggaccacctgcagtgatgacttgttttattattggaaagattcaccaaggtccatgcttcctatttaccgtgagctgattgcggctggtctaagaatatgggttttcagcggcgacgctgattctgtagtccccctcactgcgacaagatactccattgatgcactctatctacctactgtcactaactggtatccttggtatgatgatgaggaggttgctggttggtgtcaagtgtatcaaggtttgacactggtgacgatccgaggagcagggcatgaagttcctctccatcgtccacggcaagccttaaaactctttgagcatttcctacaagataagcccatgcctcaacctgtacatagcattcaatccttttag</cdnaseq>

Protein Sequence

<aaseq>MAAAAVLLAAILLALSPLPMSLSAGGGGGGDTGTAEAAADRITA LPGQPRVNFSMYSGYVTVDAAAGRALFYWLIEAADPASAPLVLWLNGGPGCSSVGYGA SEELGAFRINPDGRSLYLNPYPWNRVANMLFLDSPAGVGYSYSNTTSDLFTAGDNKTA HDSYAFLVNWLERFPQYKYRDFYIAGESYGGHYVPQLSQLVYRNNKDVEKPILNFKGF MVGNAVIDDYHDYVGTFEYWWTHGLISDDTYQKLQVACDFESSAHASEACNKIYEVAE AEQGNIDAYSIYTPTCKKTSFLKRRLIRGNSPWLPRGYDPCTEKYSTKYYNLPEVQKA FHANVTGIPYAWTTCSDDLFYYWKDSPRSMLPIYRELIAAGLRIWVFSGDADSVVPLT ATRYSIDALYLPTVTNWYPWYDDEEVAGWCQVYQGLTLVTIRGAGHEVPLHRPRQALK LFEHFLQDKPMPQPVHSIQSF</aaseq>

Gene Sequence

<dnaseqindica>78..459#548..643#737..829#952..1037#1153..1416#1596..1723#1826..1921#2100..2205#2298..2462#actgacttcccacacagactgctccgagctctccattcccgcgacccattgacccatcgggatcctggagcgcgccaatggcggcggccgccgtgctcctggccgccatcctactggcgctgtcccctctccccatgtccctctccgccggcggcggcggcggaggtgacactggcacggccgaggcggccgcggaccgaatcacggccctgccggggcagccacgggtcaacttctccatgtactccgggtacgtcaccgtcgacgcggccgccgggcgcgcgctcttctactggctcatcgaggccgccgacccggcgtccgcgccgctcgtgctctggctcaacggcgggcccgggtgctcctccgttgggtacggcgcgtccgaggagctcggcgcgttccggatcaaccccgacgggaggtcgctctacttgaacccctacccctggaacagaggtctcggtttctgttcttcccgcagccgtctcgtttcagtcgagaaatgtgtgcttcattttgatgaatttttttcgttgggttgcagtggccaacatgctgttcttggactcccccgccggcgtcggctactcctactccaacaccacctccgatctgttcactgctggtgataacaagacaggtgaactggaagcaattcaacttcttgtttagtgctgctaggagcatagtgccaattttttttcttgctctgatgctaattgctggtgtgcagctcatgattcatatgctttcttggtgaattggttggaacggtttccgcagtacaagtaccgtgatttctacatcgcaggcgagagctatggaggtgaatttcaatcataattggttaattatgagataggagctttgcactttagcaaattgcagatatgctactgtctttatgtttcagcatattcattcctgctgcaatgactgctttttcagggcactatgtccctcagttgtctcagctagtgtaccggaataacaaagacgttgaaaagcctatcctaaactttaaaggctttatggtgagaactttgtgtgatctcttttcctcaaatgaactgtgtgatctctgaaaatataaatttgtctggtcgctttctacttatgaatgataaaatggtactccaaatttactaggttggaaatgcggtaatcgatgattaccatgactacgttggcacatttgagtactggtggacacacgggctgatatctgatgatacatatcagaagctgcaggtggcctgtgattttgaatcatctgctcacgcatcagaagcatgtaacaagatttatgaagtggctgaggctgaacaagggaacattgatgcatacagcatctatacgcctacctgtaaaaaaacttcatttctcaaacgcaggttaataaggggtaactcggtaagtctgtccactctaaactagaagttaattgttttttggtagtagcatggtataatagttattaggatcaatgtgtgcagcactgcaactgcttatagtgttattcagataccctctgaatatatggtgaaacatggctcatgtattgcttcctaaccaaaatttttcgaatgtagccatggttgcctagaggatatgatccctgcactgaaaagtactctacgaagtactacaacctaccagaagtgcaaaaagcatttcatgccaatgtcactggaataccgtatgcctggaccacctgcaggtctgtcaattgattgcatcttccaataatcacaactagttcaacaaagttttttttttttggtaatggtaatttgtgctgagattctgtaacgattttcagtgatgacttgttttattattggaaagattcaccaaggtccatgcttcctatttaccgtgagctgattgcggctggtctaagaatatgggttttcaggtacacagatttcttgattttgtagaaagatggtttgaaactgcatccttattctttgatggttgcattattgctgatctaatagattcataaatcataatcataatacaatgctgatacagtaatatgaaactgtccatcaacgtggacttaatatttgtattggacaatttggcagcggcgacgctgattctgtagtccccctcactgcgacaagatactccattgatgcactctatctacctactgtcactaactggtatccttggtatgatgatgaggaggttagtcagcaacagttactaccaccctgccagttctgttccccatcccttttctatgcttattatttgttgatggtgtgaatcatgcttaggttgctggttggtgtcaagtgtatcaaggtttgacactggtgacgatccgaggagcagggcatgaagttcctctccatcgtccacggcaagccttaaaactctttgagcatttcctacaagataagcccatgcctcaacctgtacatagcattcaatccttttagaattttcttccatttaaagtggaagatcatgccacgaggccatgatgttgtataatttgaagtctgtctcccacattttctgatgaacagatgaaatctgttcaaatgacagctggccatcattcttaatttattcaactatatgttcctagtgacttcagaaataatgcccatcctgttgaatatttccttttcggtttatgtataccacaagaccaagatggaaatatagtttttcattttatgagcttgcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0158200, RefSeq:Os01g0158200