Os01g0160300

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Revision as of 04:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0160300| Description = Zinc finger, CCHC-type domain containing protein| Version = NM_001185260.1 GI:297719654 GeneID:9266113| Length = 918...")
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Gene Name

Os01g0160300

Description

Zinc finger, CCHC-type domain containing protein

Version

NM_001185260.1 GI:297719654 GeneID:9266113

Length

918 bp

Definition

Oryza sativa Japonica Group Os01g0160300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3146851..3147768

Sequence Coding Region

3146851..3147768

Expression

GEO Profiles:Os01g0160300

Genome Context

<gbrowseImage1> name=NC_008394:3146851..3147768 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3146851..3147768 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgaagatcggcgatggcagcaaggctgttgccggcgacgacgacaacagcaagctagtggtgcagcaagtgaaggaggcaggggtgacgctacgttaccccatgctcggggagaacaactacggcatttgggcggtgaaaatgaaaattttcatgcacgcacaaggggtgtgggctgctgtggagggcgacgcagccgatgagaagatcgaccaaatggctctcgccgccattgtccaagctgtgccggaggccgtggtgatggccatatccgagaaggagacggcgaaggaggcgtgggatgccctcaagcagatgaacatgggtgaagagcgtgtcaagaaggctcgagtacaaaccctcaagagggagcttgatggtatgtacatgagtaattctgagaaaattaatgattttgctttaaaggttaccacgatcgtgaacgagattcgctctctcggcacgaaagtggaggagaccacggtggtggagaagctcttgcattccgttcccgacaagttccaacccctcataagcaccatcgagcaatggggggatgtgtcggagatgacggtgacggagacgatcgggcgtttgcgggcgttcgaggagtcttcaaaggggcaacgacgtgacaaagagggggagcagcagttgttggccgcgtgtgccgagccacggctgacgcgtgctgagtgggaggcgaaggttgctgaagagagcagtggtggctccggtagcaacggtgttggtgagaagaagtttcgcggcaagttcgacaagtcgaagattgagtgtcacaggtgtggcaagttcggacacttcgccgacgagtgtgacgagccgcggaaaatgaccaaggcagtggtgcagcttgctattgccgacgcagatgatgaacccactttgctgtga</cdnaseq>

Protein Sequence

<aaseq>MPKIGDGSKAVAGDDDNSKLVVQQVKEAGVTLRYPMLGENNYGI WAVKMKIFMHAQGVWAAVEGDAADEKIDQMALAAIVQAVPEAVVMAISEKETAKEAWD ALKQMNMGEERVKKARVQTLKRELDGMYMSNSEKINDFALKVTTIVNEIRSLGTKVEE TTVVEKLLHSVPDKFQPLISTIEQWGDVSEMTVTETIGRLRAFEESSKGQRRDKEGEQ QLLAACAEPRLTRAEWEAKVAEESSGGSGSNGVGEKKFRGKFDKSKIECHRCGKFGHF ADECDEPRKMTKAVVQLAIADADDEPTLL</aaseq>

Gene Sequence

<dnaseqindica>1..918#atgccgaagatcggcgatggcagcaaggctgttgccggcgacgacgacaacagcaagctagtggtgcagcaagtgaaggaggcaggggtgacgctacgttaccccatgctcggggagaacaactacggcatttgggcggtgaaaatgaaaattttcatgcacgcacaaggggtgtgggctgctgtggagggcgacgcagccgatgagaagatcgaccaaatggctctcgccgccattgtccaagctgtgccggaggccgtggtgatggccatatccgagaaggagacggcgaaggaggcgtgggatgccctcaagcagatgaacatgggtgaagagcgtgtcaagaaggctcgagtacaaaccctcaagagggagcttgatggtatgtacatgagtaattctgagaaaattaatgattttgctttaaaggttaccacgatcgtgaacgagattcgctctctcggcacgaaagtggaggagaccacggtggtggagaagctcttgcattccgttcccgacaagttccaacccctcataagcaccatcgagcaatggggggatgtgtcggagatgacggtgacggagacgatcgggcgtttgcgggcgttcgaggagtcttcaaaggggcaacgacgtgacaaagagggggagcagcagttgttggccgcgtgtgccgagccacggctgacgcgtgctgagtgggaggcgaaggttgctgaagagagcagtggtggctccggtagcaacggtgttggtgagaagaagtttcgcggcaagttcgacaagtcgaagattgagtgtcacaggtgtggcaagttcggacacttcgccgacgagtgtgacgagccgcggaaaatgaccaaggcagtggtgcagcttgctattgccgacgcagatgatgaacccactttgctgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0160300, RefSeq:Os01g0160300