Os01g0164900

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Revision as of 04:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0164900| Description = BRCA2 repeat containing protein| Version = NM_001048641.1 GI:115434695 GeneID:4324417| Length = 3141 bp| Definition...")
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Gene Name

Os01g0164900

Description

BRCA2 repeat containing protein

Version

NM_001048641.1 GI:115434695 GeneID:4324417

Length

3141 bp

Definition

Oryza sativa Japonica Group Os01g0164900, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3350926..3354066

Sequence Coding Region

3350926..3351049,3351167..3351301,3351450..3351575,3351662..3351757,3351847..3351972
,3352080..3352205,3352302..3352436,3352600..3352704,3352841..3352906
,3353333..3353503,3353650..3353706,3353806..3353983

Expression

GEO Profiles:Os01g0164900

Genome Context

<gbrowseImage1> name=NC_008394:3350926..3354066 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3350926..3354066 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagaggaggtggcaggtgtgggggaagcccgacgggagcctcgtctgggtacccgcctccgacgggccgccgccaccggcggcggcggccagtgaggcgccgcttcctcgtcccgatccgcagccggctgcgacggagctgggagaggcgcgatccggcgatgcgattcccgaaggccccggcgccgccgatggatgcagcgtcccgtcgatggctgacctcttcaaccaagctttggataagctggttgctgctgatggaatggccgaagcgatcgaggattcagggaaaggtgcggtgttctgcactgggttggggggatcagttgccgtcagcgagagggctgtagagagggccaaggcattggttggggaggtcgcggaggagataagtaatgagagaaggcaaccatttggtgatggttctaatttggagtgcggattgggagaaagtaatgtttcatttaaaggtggtgtacataaagatagtttgtctccgatgttccaaaccggatcgggtaaaatggtttcactgagcaagggctcaattcagaaggctagagctgttttagaaggaaatgccgagaattcttctgtcattgctgtacagtctatgttccatactggattggttaggccagacccagtcagcaggagctccactgataatgcaatgactgttttggagggacaaacaaatccaaaacaaggagatgtggcagatgtgtatgacaaggaaaattttccattgttccaaactggttcaggtaaagctgtatcggtcagtgtagcatctatccagaaagctaaggctgtcctggagcaaaataatacagtagaaaacacggaagattttggtaggcctgaccaatctctgattttccaaactggttcgcgaagaccagtcttgatcagtgaaagatctagctctgtggtgaaggatggaggtgctgaaaatattgtgttccaaacggggttagggaggcctgttgtggtgagccagacctcaattcaaaaggcaaggacagtattagatcaagaatgtgccaaaagaagtggacatggagatactaatgtctccaccactacttttcaaactgaaacaccaacgtctgttctgatgagtggtggcctgactatgaatgatagatctgttacacctgaggggggtgtttcaatgcaaggaaattttttggaggctgatggtcacttgccattatttcaaactgggttagggaggtccatttcagtaagtaaaggctcaattaagagagcaagtgcacttctggagccaaggaacattacaaaagaactggaagatgaagctcactcagatgatggctgtgccactccaatgttcaaaactggatcaggaaggtctatcacagcaagtgaaaattctagaaagaaagcccacgttgtcttagagggcgaggaaccagt</cdnaseq>

Protein Sequence

<aaseq>MQRRWQVWGKPDGSLVWVPASDGPPPPAAAASEAPLPRPDPQPA ATELGEARSGDAIPEGPGAADGCSVPSMADLFNQALDKLVAADGMAEAIEDSGKGAVF CTGLGGSVAVSERAVERAKALVGEVAEEISNERRQPFGDGSNLECGLGESNVSFKGGV HKDSLSPMFQTGSGKMVSLSKGSIQKARAVLEGNAENSSVIAVQSMFHTGLVRPDPVS RSSTDNAMTVLEGQTNPKQGDVADVYDKENFPLFQTGSGKAVSVSVASIQKAKAVLEQ NNTVENTEDFGRPDQSLIFQTGSRRPVLISERSSSVVKDGGAENIVFQTGLGRPVVVS QTSIQKARTVLDQECAKRSGHGDTNVSTTTFQTETPTSVLMSGGLTMNDRSVTPEGGV SMQGNFLEADGHLPLFQTGLGRSISVSKGSIKRASALLEPRNITKELEDEAHSDDGCA TPMFKTGSGRSITASENSRKKAHVVLEGEEPV</aaseq>

Gene Sequence

<dnaseqindica>3018..3141#2766..2900#2492..2617#2310..2405#2095..2220#1862..1987#1631..1765#1363..1467#1161..1226#564..734#361..417#84..261#ttttttttcttttttttgctcgtctcttcctcatcctctcaccgccgccgccgccgcgagcgatttctggctgtgccgccgggatgcagaggaggtggcaggtgtgggggaagcccgacgggagcctcgtctgggtacccgcctccgacgggccgccgccaccggcggcggcggccagtgaggcgccgcttcctcgtcccgatccgcagccggctgcgacggagctgggagaggcgcgatccggcgatgcgattcccgaaggttcggtctctccctctctctctctctcttcgaggtactattcgttcgtggaatgagcccccgcattattactgatcccctttcgcctcgaaaccctaggccccggcgccgccgatggatgcagcgtcccgtcgatggctgacctcttcaaccaaggtgccgcactgccgcctcgtccacccatctcatctccactcgtccgtgtgcgggcacgcgcgtgcttgcctcccatttacgaacttgttatgccactgcattgtactaagtgtcatgtttgtttgctgtggatgtggaaatcgcagctttggataagctggttgctgctgatggaatggccgaagcgatcgaggattcagggaaaggtgcggtgttctgcactgggttggggggatcagttgccgtcagcgagagggctgtagagagggccaaggcattggttggggaggtcgcggaggagataagtaatgagagaagtaagaggttttgcggtttgcttttttcaaagtgttacattctcacaacaattttattggtcttgtggccctccttttgtcttttggggacacataatatccgcacatcttagatatattagaagaaacgaagacaacaagtcattgcagtccactgaattacaaacaaacaagagaaaaatggagcaataaatttgaattatttccaatcttctggtcatgccctttcctctttagttgctgtgatgatttcctcgggctactactagatgaagatacccacacacttttctttttcttaaaagttgctgcctatcttttctgaagttttgcatttcttgctttgttgatagcatggaattcaatgtctttctgttctctttctccaagacttgcataccaggctgatacttgtatgtattgcagggcaaccatttggtgatggttctaatttggagtgcggattgggagaaagtaatgtttcatttaaaggtaagttttgtttcaatctctcttcttggagatcaggttggatgattcaactgtaggtagaagtacaaagttctgattagttacacattctcgaggttcaatggtataattcgcctttgcatcttatgaaattcaggtggtgtacataaagatagtttgtctccgatgttccaaaccggatcgggtaaaatggtttcactgagcaagggctcaattcagaaggctagagctgttttagaaggtaggaagtttgtcatctgcttactttctgtgtaattacgcagaatgtttcatttctttgggcatggtgacatatatttggctctaattaatttaggatagtttgagctgtgtagcactcgacaatctatcatgataatgaatcttcgtaatctattattcaggaaatgccgagaattcttctgtcattgctgtacagtctatgttccatactggattggttaggccagacccagtcagcaggagctccactgataatgcaatgactgttttggagggacaaacaaatccaaaacaaggttattctgttgacagaatattctataatttcatctagcaaaattttacacaaaattctaatcatgcctttactttttgaacggctgatctttcaggagatgtggcagatgtgtatgacaaggaaaattttccattgttccaaactggttcaggtaaagctgtatcggtcagtgtagcatctatccagaaagctaaggctgtcctggagcaaaataatacaggtgaggataagattagattgtcctgcttgttaattttgagttaaatacttctacctaattattgagaaatgtgcgccttctggttgtaatgaactttcctcccatagtagaaaacacggaagattttggtaggcctgaccaatctctgattttccaaactggttcgcgaagaccagtcttgatcagtgaaagatctagctctgtggtgaaggatggaggtgctgaaaatattggtaagattggagttatgtaaatgtagctgttgttattagtgatttcttctctgtgtgaaggaaattgaattctgaccgtgaattcctagtgttccaaacggggttagggaggcctgttgtggtgagccagacctcaattcaaaaggcaaggacagtattagatcaagaatgtgccaaaagaagtggtaagaaactttgtgtgcaggcttgtatttttttactgcataatgcacaaggtcatcagctttgcttatttttctattgggttcaggacatggagatactaatgtctccaccactacttttcaaactgaaacaccaacgtctgttctgatgagtggtggcctgactatgaatgatagatctgttacacctgaggggggtgtttcaatgcaaggtacatggttttctgaagtttcctgtaaaaggcttttttttcatttcatttaaacctgtgttactatctagtcaaatttggaacaataaaaatatttactgttgatgcgttttagatatttgccatactaatcactgtcatccaacaggaaattttttggaggctgatggtcacttgccattatttcaaactgggttagggaggtccatttcagtaagtaaaggctcaattaagagagcaagtgcacttctggagccaaggaacattacaaaagaactggaaggtaggtttcactcaacatgttgcttactgtggttttgccattgaaatgtgtttttattagtctaccaaggataaaggaggcatgtagcatgttaacaaaaagttcttcatctgttagatgaagctcactcagatgatggctgtgccactccaatgttcaaaactggatcaggaaggtctatcacagcaagtgaaaattctagaaagaaagcccacgttgtcttagagggcgaggaaccagt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0164900, RefSeq:Os01g0164900

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0164900&oldid=24782"