Os01g0165200

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Revision as of 04:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0165200| Description = STAT protein family protein| Version = NM_001048644.1 GI:115434701 GeneID:4327136| Length = 5597 bp| Definition = O...")
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Gene Name

Os01g0165200

Description

STAT protein family protein

Version

NM_001048644.1 GI:115434701 GeneID:4327136

Length

5597 bp

Definition

Oryza sativa Japonica Group Os01g0165200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3361062..3366658

Sequence Coding Region

3361460..3361549,3361660..3361846,3362038..3362139,3362230..3362306,3362976..3363175
,3363253..3363595,3363837..3363893,3364011..3364727,3364805..3365007
,3365171..3365297

Expression

GEO Profiles:Os01g0165200

Genome Context

<gbrowseImage1> name=NC_008394:3361062..3366658 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3361062..3366658 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgctggaaagaagactcagaccgagaacgagttccgtgagctcccggaaaaggagctaggaggggtggtcttttgttgcaataacaacacattcgatgaatgcttcactaaacagttatttggtttgcctcaacgcaatatcttgtatgtgaagaatgttaaacctggcttgcctctctttctgttcaattatagtaacagacaattgcatggcattttcaaggctacaagcactggccagcttaatatcgaccgatttgcttggatgtctgaacagtctaatgatgcaaagacaaatgcaaagacaacaccatttcctgcacaggtccgcttctctaccaggacagagtgccctccacttccagaaagcaaatacaaaagtgtaatcataaacaattatcgcaaggataaacctagccacttccgttttgagctagaccatcgacaaacaagagatttgatttctttgtttctacctgctcctgttcgcgctaatcaaaacaaacttagtattccaaaacctcctgctaccgctcatactgttccaaatccatggaatcgacctctgccatttcttacagcaaaagcacctgttgtttctgataaagtgaagagtgaatccaatgtgaaggatgtggatcagttcaatgtttcatcacactcacatgatattgttcctcataccttgcctgatgtagaagtcgaccttgctagcacaagtacaacatcaaggagcaaccttaacaaagatgcttctggctgtgatgacctggttgctggtttgatcaaggaagataaagaatctgtggatgatgaccagcatgctaaaatggatttaccagtaaagctgcaagagctgtcttctttacaacagaaggaagccaatttcttggaggatgctcctgtttctacttcagctcaaagcatacgtcaagatacacggtttgctgctactctccccaaagattcatttaatgccacatctcaatgtgacacatcattgaaagatacatcctttgtgcaatgccatgaatatgctgagctgtatcaaattatcaatgatttatccaagaagaccgaagaaatggaaaagatgaaggttgattcagatcaagaaattttgttgttgaagaaattggtaaaggttatggaaagaaaagttgaacatctggaacagcagcttgagaaatcgcatagctcttcagcaccactcttcggtgtaacaaatgatgatgtagaagggccatcaatactcctaacaggtggccataatggcattaactggctgtcatcccttgattcatattgccctgcaacggacatactagaaactctaatgccaatgagctcagcccgtgcatatgcggctgttgccacattaaaggaccatgtcttcatttttggtggttggaatggcattcgcagtttgtggtacaacacagtggagtgctacaacaggggagccaataagtggataggattgccctgcttgaatcatgagaaagggcatcttgctggagctaccttgaatggtaaaatatttgctattggtgggggtgatgggtctcagtctttttcagaagtagagatgtttgatccagcagtggggaaatggatatacagtttgtccatgcagcaacctcgatgtgctcctgctgcggctgaattaaatggcgttctctatgtaattggtggttatgatggcaacatgtacttacagtcagcagaaaggtatgatccaagggaaggcttctggacccaacttccacgtatgcggacaagaagaggatcccattcagtagttgtcttgggggattcactacatgctctgggtggcctgaatagaaataccacgttttccagcgtagagatttttgacacccgtgccaactcatggagaagggggagcccactcagcgtcccaagagcacacggatgtgcggttacattggacggcaacgcatacctcattggtggtatccaaagcagtgaagaatacgttgaaactgttgaggtttacaaggagggccaaggctggtccatctctggttccaaggcattcgggaagagagctttcgcatgcgccgttgccatttga</cdnaseq>

Protein Sequence

<aaseq>MGAGKKTQTENEFRELPEKELGGVVFCCNNNTFDECFTKQLFGL PQRNILYVKNVKPGLPLFLFNYSNRQLHGIFKATSTGQLNIDRFAWMSEQSNDAKTNA KTTPFPAQVRFSTRTECPPLPESKYKSVIINNYRKDKPSHFRFELDHRQTRDLISLFL PAPVRANQNKLSIPKPPATAHTVPNPWNRPLPFLTAKAPVVSDKVKSESNVKDVDQFN VSSHSHDIVPHTLPDVEVDLASTSTTSRSNLNKDASGCDDLVAGLIKEDKESVDDDQH AKMDLPVKLQELSSLQQKEANFLEDAPVSTSAQSIRQDTRFAATLPKDSFNATSQCDT SLKDTSFVQCHEYAELYQIINDLSKKTEEMEKMKVDSDQEILLLKKLVKVMERKVEHL EQQLEKSHSSSAPLFGVTNDDVEGPSILLTGGHNGINWLSSLDSYCPATDILETLMPM SSARAYAAVATLKDHVFIFGGWNGIRSLWYNTVECYNRGANKWIGLPCLNHEKGHLAG ATLNGKIFAIGGGDGSQSFSEVEMFDPAVGKWIYSLSMQQPRCAPAAAELNGVLYVIG GYDGNMYLQSAERYDPREGFWTQLPRMRTRRGSHSVVVLGDSLHALGGLNRNTTFSSV EIFDTRANSWRRGSPLSVPRAHGCAVTLDGNAYLIGGIQSSEEYVETVEVYKEGQGWS ISGSKAFGKRAFACAVAI</aaseq>

Gene Sequence

<dnaseqindica>5110..5199#4813..4999#4520..4621#4353..4429#3484..3683#3064..3406#2766..2822#1932..2648#1652..1854#1362..1488#acgcccacccatccactcgcaccccgcgccgcaccaacacacgcagaggtggtgaactggttgatcgatgcttgctgctgctgcgcgtcgaggcggctccatcggcggcaaccgctgatcgatcgatcgatcccgcgggtttcgtagcacccgagcaggtgagcgagcgagcgatcccctcccgcgcggccgcgcctcgatttggtcgcgattggtgctggattttctctctctctctctctctctctctacctttcctgtttcggtgggggttttggtggggttttgtggctcgaggtggtcggggatttctggggtgatgggagaggggctcgcgtggtggtggattgttcgctggaatggcggggaatgctgtgccgtttgggggattgatgccatggtgatgggtcgaaatgctggatggggttgagtttgttcaagtggttttgaattggaatctgtggagtttggggggaaatggggaatggggcttcgagtgcgcaaaggttttgcatgtgcggaattgcagctcgaggttttcgctggatttaggcgtagcttctgtgcgcgtgtttgtttagcgattttagcagttcgtgggctggtgccgccgcgtgtttgaatggtttagcgctttatttaccgttacagttgatgtctgcggtttttctggtgatttatgccagtttttagaggtgaatcgctgtgttttgggggaattctagagcccagggttgggtttatgggggcgagattttagctgttggattttaatcctatattgcgagaagcatgggagaactgcgatccgtcgtcagaggtgaacgctttcgaactctgatggttttaatgtggcagatattgtgaagcttatggtagcttcgttaacttgatcgacgtttttacttgtgctgctcgtgcgttgtggtagatttggcttgtgagagagcaggtggatggggtagattcagattacagagtggtttactgcatgtagcgatgtgtttgagttgtaacttgtgaggctgtaagattaaaatgttggcatgcgtggggtttttgggggtaatattttgttttgtttttgtttttgttttttgctagtgttttgacccaatccatctcccccatctttttttagtggaaaaccgctccctgttggtactactcaagtaaacttaccagaattacaatcctccaacaaaggaataataccctgtgctgtttgttgtgacaacttatctgtacatgatattgctagtttgctactgcagtatacctacatgctcacttatgtttgtttcttttagataatgtcacttatgtttgtgttttgcataatgttgataatttctcgaagaatgggtgctggaaagaagactcagaccgagaacgagttccgtgagctcccggaaaaggagctaggaggggtggtcttttgttgcaataacaacacattcgatgaatgcttcactaaacagttatttggttagtaaaagtcccttttcgcctgtcctaatttcatctaaatgatatgtaaaatccatacgcgtgtgattacttttattcaagaacattgacattgctaatcaacattcttttgaacttctcgtttaattgggaatccattcgtttgccttttgtttgataggtttgcctcaacgcaatatcttgtatgtgaagaatgttaaacctggcttgcctctctttctgttcaattatagtaacagacaattgcatggcattttcaaggctacaagcactggccagcttaatatcgaccgatttgcttggatgtctgaacagtctaatgatgcaaagacaaatgcaaagacaacaccatttcctgcacaggtataatagaaacaacatatactggtctttgttctggttatagtttcataagcattgtgagtatttgtgttcttcaggtccgcttctctaccaggacagagtgccctccacttccagaaagcaaatacaaaagtgtaatcataaacaattatcgcaaggataaacctagccacttccgttttgagctagaccatcgacaaacaagagatttgatttctttgtttctacctgctcctgttcgcgctaatcaaaacaaacttagtattccaaaacctcctgctaccgctcatactgttccaaatccatggaatcgacctctgccatttcttacagcaaaagcacctgttgtttctgataaagtgaagagtgaatccaatgtgaaggatgtggatcagttcaatgtttcatcacactcacatgatattgttcctcataccttgcctgatgtagaagtcgaccttgctagcacaagtacaacatcaaggagcaaccttaacaaagatgcttctggctgtgatgacctggttgctggtttgatcaaggaagataaagaatctgtggatgatgaccagcatgctaaaatggatttaccagtaaagctgcaagagctgtcttctttacaacagaaggaagccaatttcttggaggatgctcctgtttctacttcagctcaaagcatacgtcaagatacacggtttgctgctactctccccaaagattcatttaatgccacatctcaatgtgacacatcattgaaagatacatcctttgtgcaatgccatgaatatgctgaggtgccttaagctattccatcccttattaccattttcccttacgcaccatatttcagtgctacaacttatatattttggtgcgatgtttatggcctgctttttggcatttgtctgtagctgtatcaaattatcaatgatttatccaagaagaccgaagaaatggaaaagatgaaggtacttttcttcttgcttaaaatcagtaggatcttctcttttaaagaagaaaaggtataaatagatgaacccgttttcctaattggttttatctcttgtcagtatgtctggttttgtgggttttaaaccatgttcaaattttaaccggaaaaccaaactagtatatatgtgtttgatattgagttaattacgctgttcaagtgtgcaaactccgatcttgattatggtttgaacgttctaggttgattcagatcaagaaattttgttgttgaagaaattggtaaaggttatggaaagaaaagttgaacatctggaacagcagcttgagaaatcgcatagctcttcagcaccactcttcggtgtaacaaatgatgatgtagaagggccatcaatactcctaacaggtggccataatggcattaactggctgtcatcccttgattcatattgccctgcaacggacatactagaaactctaatgccaatgagctcagcccgtgcatatgcggctgttgccacattaaaggaccatgtcttcatttttggtggttggaatggcattcgcagtttgtggtacaacacaggtaaacattcttcaatatgccaaacgtagtgctctatataagcaagctgttgaccatctgcatttgttttattgcagtggagtgctacaacaggggagccaataagtggataggattgccctgcttgaatcatgagaaagggcatcttgctggagctaccttgaatggtaaaatatttgctattggtgggggtgatgggtctcagtctttttcagaagtagagatgtttgatccagcagtggggaaatggatatacagtttgtccatgcagcaacctgtatggttctacttctactcccttataacacttgtatagagtagaatgtaccagcctttttggccaatttaatagggtcctggtcttcgctatgttctcactgtgattttcttgataaggctcaagatttattagatggcccaggaaaaaaacatgttgtgaagagaggctgtttgaactgcatttcctataatcacttacatctttgggttcttaatcttttacaagatgaatagtgctgctcacagaacagtttctactattatttcaatcatttcttacgtgtcgtaaatcagtaaaaaagtttgttctcgtggtgaactatgctgagtgatttagaatttagatagctgtttgagcagtagtgggcaagctgactgtgagttggacattcgcttgagcactagtcttacagggttggttggaccatttgcaaatctaatctaagctacattttgagcacttgaataggcaataaatatttttcaaattcaggctatttcaaattatggaatgcaaattgcaattcatgtaatttcatgggatttatgaggcatatacattgtaactttccagttcaccttgcatgaaatattatcccatatttttaatgtatttttatttttgaccaatatacccacctcaccaacatgtattttattgttccagcgatgtgctcctgctgcggctgaattaaatggcgttctctatgtaattggtggttatgatggcaacatgtacttacagttacgatccaccctcaccattctctccatgctttacttgattttgattctgagaccttcctattgaatgattgatcctcatatgcacaggtcagcagaaaggtatgatccaagggaaggcttctggacccaacttccacgtatgcggacaagaagaggatcccattcagtagttgtcttgggggattcactgtgagtttcgctcgctttatctgtgtgtgtaatcaacagagaggtcatgtgatttcaaaaaaacacacacacagattccacctggcagttagatgctactattagccttatatcactatcttttatttgacgtctcgatataaacctgataatatacgacttaacatccaacatgggaatttcattttcagacatgctctgggtggcctgaatagaaataccacgttttccagcgtagagatttttgacacccgtgccaactcatggagaagggggagcccactcagcgtcccaagagcacacggatgtgcggttacattggacggcaacgcatacctcattggtggtatccaaagcagtgaagaatacgttgaaactgtgagttctttcccaagatcactctctccatcatccattgctgttgcttcaactcgccgaactctcacatccttctctcgttttattttgttttgttttttatttcacaggttgaggtttacaaggagggccaaggctggtccatctctggttccaaggcattcgggaagagagctttcgcatgcgccgttgccatttgacaggattgcagaagtgcagatgaacccccgggccggttttgtacagcaccagtccccaaccccgcctcacagtattaccttctctcaagcgaaatattgccgctcattgctgagcactgacgcctgacggcccatccattctgtgcatcccagtcatacggtttttacattttagaaacaacaccgtagcgagttctggtatgcgttaactctgcccgttgttgtttctcactgaagataggtgttgttggttgtcacctgattgtagcggagcaaactgaactgtctacaggacactagttacttagagaagttcgaatgaacaaactttagctggtgatagcagtacatatgggaggcttggaagctggtataatttttgattttttttttgaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0165200, RefSeq:Os01g0165200