Os01g0165800

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Revision as of 04:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0165800| Description = Conserved hypothetical protein| Version = NM_001048646.1 GI:115434705 GeneID:4327138| Length = 4038 bp| Definition ...")
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Gene Name

Os01g0165800

Description

Conserved hypothetical protein

Version

NM_001048646.1 GI:115434705 GeneID:4327138

Length

4038 bp

Definition

Oryza sativa Japonica Group Os01g0165800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3385766..3389803

Sequence Coding Region

3385907..3386174,3386283..3386470,3386542..3387027,3387123..3387184,3387269..3387365
,3388179..3388187

Expression

GEO Profiles:Os01g0165800

Genome Context

<gbrowseImage1> name=NC_008394:3385766..3389803 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3385766..3389803 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcaaatttgcctctggactatgaacctcctttttttgagagttatgatgatatgagaaaacgttgtccgctcccactacatactactttatcagattactcacaagatttgatcagtttacatgatgtaaaatcagtgctctccaacaatccctttcattccaacaaggtttttgcaatggacccaaaaagcaaaatccaacaagggcaccttttttgcattactaagaaagatgtccacttctattttgattctggtgctagccaccacatgtgtgatgatgataaactcttcaaaaatctccatgaggttcctactgaacatcaggatactgtttatgatgctagtggcgacccagtgtgcctgcacatgtccggtgaagtgatatatgatcaaatcaaattgagtccagtattctaccactctactctcaaatttaaagttatatctcttggtgaactggatgattctaacaccctcatgtatgttggagataaaaggattaaaatctttgatgtaaataaaggtgaaatgatcggcgagggatatctccacgaaaagagaaatgaatatatagttcgaagcatcatatgcagaaaagaagaacaacaagctataaccagatcgatgttgtcctcaacggcaattgatgagaaaaatttgtgggtagttgattctctatgctgcaatcacatgactggtataaagggacttctatctgatacaagacacgaggtacagtcatttgttacccccagaggtgcatttttaagctcaaaaattggaaatgtgaagactagtacagtaacactgtttaatgtgttgtactgtaagggactgagacagaatctcatatccgaaggtcaattagaccgtgacggctattcatgtacaaggcttgctcacaaatgcaagattcagtggagagggactcaagaagttgttggtctagctcatcaggacgagaatgcactgtattacgtggattattttcactatgtcagcgacccatctttgaagcatacgaggaatgatggagaatgcatacagaagttgaagcgtccgcggcaagatggatcctctccatctagtaggaaaaggactgcgtaa</cdnaseq>

Protein Sequence

<aaseq>SNLPLDYEPPFFESYDDMRKRCPLPLHTTLSDYSQDLISLHDVK SVLSNNPFHSNKVFAMDPKSKIQQGHLFCITKKDVHFYFDSGASHHMCDDDKLFKNLH EVPTEHQDTVYDASGDPVCLHMSGEVIYDQIKLSPVFYHSTLKFKVISLGELDDSNTL MYVGDKRIKIFDVNKGEMIGEGYLHEKRNEYIVRSIICRKEEQQAITRSMLSSTAIDE KNLWVVDSLCCNHMTGIKGLLSDTRHEVQSFVTPRGAFLSSKIGNVKTSTVTLFNVLY CKGLRQNLISEGQLDRDGYSCTRLAHKCKIQWRGTQEVVGLAHQDENALYYVDYFHYV SDPSLKHTRNDGECIQKLKRPRQDGSSPSSRKRTA</aaseq>

Gene Sequence

<dnaseqindica>3630..3897#3334..3521#2777..3262#2620..2681#2439..2535#1617..1625#aaatctcggcaatggaaggcgacgaagagccaccggcggcggcggcgatggcggccgtgctgacggacgatttcctgctccgatccatcctgaagtgtctgtgtccgagggatgtggtccgcgcggcccttgccaacaagagctggcggcgcgcggcggccctcgccgtcccccgcacaccgccgctcgtcggctacctcctgcacccggagaaaatccggtcggcccagatcccccccgtcttcgtccccagcgacgcctcgttcccgcgcctctccctccccttggctcccgacgacctctccggtgtgtccgtgcacgatgtccaccacggcctggtccttctactaccctgcgagcttcccgacattctcctgctccgcatactggtgctcgatccggcatccggacgccgggctctgctccctcctccgccgcgcgacgctctgcccgacgaccagtggcgccaaacccggcgcatcatcggcgccgcggtgctctcgcgcgcgcatcccagtaggctgcacttccaggcggtctgcgtcaccatcgacgacgaccgccctcgcgcctgggtcgccttcgtcaacggcgaggattgcctctggtgcatccttccacgctccaagcatgttagggttcttcgttttgatctcagcatgtgctgtgccgcccacgatcagggacagatctgctggatcgcctccaactccaaccaagtgctcgcactggaaccttcatctttggagtttcagttcataacttcttctccagctgctgtgccggttgatgtatttgcatattttctgtcttggccacctgcatttcttagcctgctcgaggttgttttctcacggttccaacctatttaataatttagatttgtccatgcaacaattgtgtttgctaaactaatttattgttgctaaacttattttaggagaatgatgatgcgctaactgacagcttgatgagtcttattaaaatagtcttctacaatatatgctacgtgagaggattgttttctaaggagttcttctctgatatgccttttctaccgacaggttgaaatcttatttgaatctatacctattcttttgtcacacttgtagcaatgaactgataagtttgtttcttatgacagggatgcagataaaaaagcttacgccgatggatgacgagtcccaaaggcttgttgattggctagaaaaaggtgaaaagtacccgacatagcatgagctccttaaatactttgcttgtccagcatatggttatgcgtgaaaaaacaatttcttatctgtccatttgattaacttttggtatcaaacttaggtgtttatgatgctctgaaaaagaagttcctcaaaactatcatcttctctatctatgatgagaagggccctctgttggaggagtattgccgtaagtttctgctagagtggggctttggcttactaatagcatatcaagctgacatggctaatactatcacacatttacatttcttttgcagtatcattcacatacttcagcgaaattacaatcgacttacggctgacgggatccactcaaagtatatggacaatgaggtccgatgcagctgagagctttgttaatcaaatttggtgagcctcttatacttctactagaacttcatggttcggacaacacgacatgtacagcagtgaaacaggtcctgaatggggcaacatgtgaatgaaatgaaccagattttgaatagggcaaaatgtgaacaaagtgacatgcataacttgaggtgctagagatgaacatcctttttgcagtagaactgaactttcttgatctttcattccatactcaggattataatacaacctagcccagcttcgactggtatttcaatatgcaatcaaaaccaactaactggttgatcagcaaagtaaagccttgtttacatattaaaaatgcatgtgggagtattgtttacataattggttaaggatattcttctagattactatttcacctcaaaaaattcttctagattagtatgaccaaaaggcgcgtgcgagaaaattgtcatgaataaggagacccttctgtatttccagtgacctatgtggctatttcaaagtgaaatgtattatgcctttttgttcaactgaattgagtgaaccatgggtgttttctccagtagtaatattaacctgaaaaatattttatatctatcactgctgaataatttagttcatacactagtagcttccactgaaaagtactctacccatatgctagtacctgcatcctctctattctagttatagttatatatattgatccatcctgaaattctgagctgctacactgatgtactatctctatgcactgacagaaaattgttccatacaactttgttactggaaactaacacaaccttcttttccccctattgtcagcctctggactatgaacctcctttttttgagagttatgatgatatgagaaaacgttgtccgctcccactacatactactttatcagattactcacaaggtaattgtatgagtcattttaaactagttctgaacattggtctctatagccctgagtaaatgtctttttgtgctcattattcagatttgatcagtttacatgatgtaaaatcagtgctctccaacaatccctttcattccaacaaggtgataatttatctctatttatattcttatgttcaatgcatgcacctttcaatttcttttcgcctgaacaacctctgccgtctcattttaattaggtttttgcaatggacccaaaaagcaaaatccaacaagggcaccttttttgcattactaagaaagatgtccacttctattttgattctggtgctagccaccacatgtgtgatgatgataaactcttcaaaaatctccatgaggttcctactgaacatcaggatactgtttatgatgctagtggcgacccagtgtgcctgcacatgtccggtgaagtgatatatgatcaaatcaaattgagtccagtattctaccactctactctcaaatttaaagttatatctcttggtgaactggatgattctaacaccctcatgtatgttggagataaaaggattaaaatctttgatgtaaataaaggtgaaatgatcggcgagggatatctccacgaaaagagaaatgaatatatagttcgaagcatcatatgcagaaaagaagaacaacaagctataaccagatcgatgttgtcctcaacggcaattgatgaggttagttctaggcttctagcccttctatccatacctggtaacttcctctcataatttgtctttacttgcagaaaaatttgtgggtagttgattctctatgctgcaatcacatgactggtataaagggacttctatctgatacaagacacgaggtacagtcatttgttacccccagaggtgcatttttaagctcaaaaattggaaatgtgaagactagtacagtaacactgtttaatgtgttgtactgtaagggactgaggtatgttcattacaattgaatcgtatgttgaaaatgttctcatccaataacgtatgggttgcaactgtttactaatccaatttaatgctttcttctatgcaaaaacagacagaatctcatatccgaaggtcaattagaccgtgacggctattcatgtacaaggcttgctcacaaatgcaagattcagtggagagggactcaagaagttgttggtctagctcatcaggacgagaatgcactgtattacgtggattattttcactatgtcagcgacccatctttgaagcatacgaggaatgatggagaatgcatacagaagttgaagcgtccgcggcaagatggatcctctccatctagtaggaaaaggactgcgtaaactggatagatgtgttcattttgtcttttgtaaacatgagaagaataccacccaacatacgaagatttgatgtgctctgttgtttcaacatttttaaacctcgttcttacagatgatggttgcatgctagtaatacccagg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0165800, RefSeq:Os01g0165800