Os01g0167700

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Revision as of 04:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0167700| Description = Conserved hypothetical protein| Version = NM_001185267.1 GI:297719668 GeneID:9272035| Length = 8084 bp| Definition ...")
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Gene Name

Os01g0167700

Description

Conserved hypothetical protein

Version

NM_001185267.1 GI:297719668 GeneID:9272035

Length

8084 bp

Definition

Oryza sativa Japonica Group Os01g0167700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3455869..3463952

Sequence Coding Region

3463517..3463876

Expression

GEO Profiles:Os01g0167700

Genome Context

<gbrowseImage1> name=NC_008394:3455869..3463952 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3455869..3463952 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tttcgaattccaatttccaagcaatccatcgcctccacctcctccaccgcctccgcctccgcctccaccgatcgaggccgccgtagcttctcgatccgcggggagctcgagctccagcacctcggcgggcggcggccaccggaattgccgcggaatccgcgcgcgtcgccagtcgccgcggcctccccgtcacctctaacccctcccgccgccgccgtccccttctccgcagcttcgggagccgccgcggcgctctctcatctcgtcggtgcgtggaccgcggcccgcggcttcacccacctcttcctgaaacttcacgcgcttacactcatcgtgcccatttcgcagccgcgaggttag</cdnaseq>

Protein Sequence

<aaseq>FRIPISKQSIASTSSTASASASTDRGRRSFSIRGELELQHLGGR RPPELPRNPRASPVAAASPSPLTPPAAAVPFSAASGAAAALSHLVGAWTAARGFTHLF LKLHALTLIVPISQPRG</aaseq>

Gene Sequence

<dnaseqindica>77..436#cgtttggagaaaaaaaatttgcgaatccaatttcgaatttcaatttgcgcgtcgccgtcgtctccgcttctcctaatttcgaattccaatttccaagcaatccatcgcctccacctcctccaccgcctccgcctccgcctccaccgatcgaggccgccgtagcttctcgatccgcggggagctcgagctccagcacctcggcgggcggcggccaccggaattgccgcggaatccgcgcgcgtcgccagtcgccgcggcctccccgtcacctctaacccctcccgccgccgccgtccccttctccgcagcttcgggagccgccgcggcgctctctcatctcgtcggtgcgtggaccgcggcccgcggcttcacccacctcttcctgaaacttcacgcgcttacactcatcgtgcccatttcgcagccgcgaggttagattgctcgtcgtttgttcactatgctgcaatggatgggtggttcgcggaggaaggtgtatgccgtgagtaccccagatctccctccctccatctctctctgttgtgcttcctcgcaattagtttgggcttggtttccatcattttttactgaaacagtgaaacggttggcgtgtaaatcatcagagcaatcgctgcatttagcactatttgtcgtgacaaactaacattcggtcatgtttgggcgtctgtgttatgcatgtttgttcctgaattgggagcagtccaggaaatcaacgcagagcaggtaacttagtttcgatggcgccatcaagttatgttgttctgctagttaacatccttatgttgatagaacaatttgtgctactcttgaacaatgctccgtaggcagaggcagtactttgagcaaaagaaaaggcaacagcagagtccaggagtacagagccaggttgatgtatcaggcactggcagtcaagcttatcatgatcaggctcctcgatcgcttgatgttataaacctgaacaatctggcaaccccaattagtcatagcagtggccctgaaagtgagtttctctatatgttttgcggtgttatactggtagtagtgaacttgttctacatgcattttctgcaccttatatttcctgttcttccggggcactttctggatatgtttttatcaggtaggttgaccaatggcactcttgttcaagtgtaacggaaggttaagagctttggaaaatctggggcagacaaataatgattgtgatttttctgcaagattacaatttgaaacatagttgtctgaagaagaaaaaacttagaacacattgctgttgtactaacttatgacaattggtgatggtttcctggaaacccaagacataaaaccatcatcggaatttatttgacagatggactgtatcgtgcactttctgtgcattttgttttggttagagtgggcttttgtggagtagtctcttttcattagtgttgcatggttttatcctaaaactgaatgcatgtccttttatcctccagttgtatgttacattaattgttgttactgttatctcagctgtagataatgttgttccaccactggattgcactcttttaagtgcttctcctatagagggactaaagaagatcacttctgcgtgcagcaatctgaaggaaccatgtaagggttcaaccttctttatatgattcaaaggaattcatcacaacgttcttgttttgttttatgacatggtatttcaatatactaacattgacatggtcatatccatccacaaagttcagaaattcagtagttctatttttttaatgtttctctcttgaatgcgcagctacctaaagaagaatgagatatgatattatttctgaagcatgtaatgtgcattttagataaaattcagtaattcatgtactgatttgttgctactgtgcaggttctcagccaaggtcagtatctccatgcagtatgataagtgcacacctggttaatcgatctagttttgtacttttgtgagatgtcatcttgtgcattggcagattgtcatcatcctctgaccatcacgatggtgcagcttctgctaacccatacaaggaaccgcttggttgcaaaatacccccaccaaaaagcaacagtgtcaagaaacaaaatccaaatgtggaactcaataatggtattttccttccctactatcaaccggttatttataatagagctacttgttcaagtatatgaattgcaaatatgctttaaaaaaatgggaagtactccctccgtttcataatgtaagttcttctagcattgcccatatccatatagatgttaatgaatataaatatatatgtgtgtctagattcattaacatctatatgaatttgggcaatgctagaaagtcttacattatgaaacggaagaagtatgtgcattgtaaatatggcataaaaggggaacaatcatcgatggcatgtattggccttaacgagaacgcttagtctgttcaggaaatatttcttgcaaccaaaggtaaaattatttgcatgaaacattgatgtaaaagtaaaatttatcaacacgtaacttgtataaatgagattgatgcgcttgttatatattattcgaagtttgatttaatgaactattgcatttccttgcagaaatttcactttttgatttggtcagtgatgagggaccaaataataaatctactgcacgacctgcccgtgaagctcatgtttcgttttctgttaaaggtgcatgttccaagaacattgaatgcataatcatcatttcatctattattgttgtatgtaattttgatcttgctggcttgtatatttggtggggatattttacttctttgcactgttgattcatgctgaggatattttcaccgaaacaacattattctattaagatttgttttattcaggttttattggtcacatatagttcttgcaacttgtgatattgtaaacatgattctgttagaaatttgctattgaattggttgcacgtgtggctgtcatgaagtcattatcattgagtccattgcctttgccttcaataatagtatacacaaatggttcattagacatatttttatgcttctttttcaggccttggccatgtcaagatggaaacacctcctcaatcaccaagatccaccaaaaggttgaatgataaacttatattactaatcaatctgtgttagtttttgcatgttgcttggtgaacaatagtttgatagttctctaaaataaagtatccaggggatcataaggtatccaggtgaacatagtttggtgaacaatagtttttgaatgttctgcattattctgcttacctcatggaaaacttctcttgcggtaaacaaatttatcttgagaatctagtttgttttactgaattcaaattcattgacaagcagtgccaataaaaacctgtccatgaagcttacaagaacaaatgattggtccagttagggtaggttttgggttcaaaatgatccagtttgctcaccttgcttctataggctatagctaagataagcaagagagctacaaggttccattgcctcgcacatgaatgttcatgttcatgactgaacttttcacaatacatccctatctttaattactttgattttgtaggactttgcctttgcctcccaaggtcatgcggtacacacagaacaaagctagaaggtatattccctttgatgcgacaaagcaattggtgagaatttcagctgccttactcttatcctgtcttttttttttcttgaacgaggcatgagagctgcttgtcatttcattaaggaggagaaaatgaagtgcacaggacaggaaggtgtcctgatccaaattattctgtctttgaaatcagatctaaatgctgataccatgttactaaccttggaaatctgagcagtacgattgtctcataggaataatagcaatatatagagttcttatgggccttaattatacgggcattgatatgcttaacaatagtttttatgggcctacaatatactggcattgatatacttaacatatagtaacatggtaagcacaaagaatatgaaagcagttggtataaaacattgataatgcaatttcgggggctttgttggactggttacctagcttacctacattgagaatttgtgactcttttcatctattattatgtacagtcttacagaagaattctgtaacttattattctatcaataaagaaataaagaatccatttaagaaaatgtttcccttgtacagcttgtatgatatatgttctctcttagatatttagattacttggttgagtaataacatttttttctcaccaaattagatgtattaatggaacctgctatttctaattaaaattgtaaacactcattccaagtcgttcttgcaggattctataataaatgatatcaacgtgctgaaagagcgaagattttcagaaaagaggacttgtcctttagatgaatcaggctatgaaagaagcaaacagtctaactgttattttccacattcatttgagaaccacaataataaattctttcctgaggatgaagacatgttttgtgaaacaaaagctgaagaatgttggcgatgtaagtaaatgatgtgccatcttattactaagtttttccacttgagttgtgtaacctaattgcaccatccatgatgcacgtttctaccttttctactcttaacagcaaagcatggtaggttggatgataatttaactgatgaaaattctgagagattgtggaagatggaaccatttaattcagaggatcgttttcctactccaatagtggaacagtttgatacacgtgattatggttttaaagatagatactctccagaacaaaggttgcttgttcacatatatttgggtttgactaataagttattttttttctcgaaaagactaataagttctcatagaccaaataataattatctttcttttttgcagaacttcaacaagaactaacacaagatttgagacatcaggttagaactatctatgtttatgttaaccatgtgccgatacacaagccgtaatcttatgttgttgttactaaactatgcaaattgatttctaacctggctatgaatatataattgactaatacgatgatccaagtattatcattatctgctcttgagaagtaagagaacattggttatctgaaacagctactgtgtagcttgacaagctggaggatttggttctacgttatgatttacctgttattaattcatcagctatgtcagtcatctagcatgtttaatgtgcaattgaaaaacgcttgattttgaccctgggtcttcctcgcggaatgtttgcattgtatacttttttttacttttctgactatttagaattccatgcttctaaatttacttttgttgaaggaattacagcaacacatgacctcttttctgatcaatcgatgatggacaatggcaacgatacagtactttttgactgggaaaggtgagcatagtagtgagtactgcaaattatatccattcaaaagtctgatgttgctattattctggataggcacccaccaattaagaaaaaatccaacttaaacagcacatttggtccttctgcttggtctttcgatatggtagacgattcagagaaaaggagaagtccacggaggtattaagagaattaacttaaactttttaacttagtgggatcaatgtgtgttctaatgttatgaaagagttagcgggatttgttgttctgaccttcccaaactattctttacagcgaagaatcatgctcatcagctgcaggtcagtgacttttgccttttacttttgttccttttctccaacaaagaacctttacattaatgatcagtgtgttctccagtaaactagggtgttctgcttctgcatgtagcatttatcttgttttattttgtcaattcaaagtaatgaaggatggatcctgcaagaaaccatcactgtcggtagaatgtgaagagaataaaatgaatgagaaggatgacttccacataagctttgataacttagatattccaaaaatggatgcacatcttgatggagtttcactattcgacaatctggaagagcaccacaaaagaacagatgatcagaataatcttgaagctggatattggtcagacaaggctacagagaaacagagaactcgagaaccaagttgtcgtttatcacttaaggagaagttttccaattggggttctacttctcctactacccattggaagggtcaaactggattaagtaacccatcaagttgcactgtgttgcatgaggataagcctttcaattctgcatcagaaatgagcacgtatcaaactgcagggtcaagttcacctgaaaggaggccagcttcaaaagtttctcctgtgtttcatagacctgacaatgccatttttgatgatgacattcacctacagagttctgtttcagatatatttggcgatagaattgaattttcaaaaccaaactgttccatgggtcttcagagtgacattgatatgagtactttcttggcagagaaggttgacaaacggaaagaagataatttagatacctccaagaaccaaaatgcagacatgtttcttccaaacaaatctgtgagttctgttagacagaatgtaggtggtcaacacagttcatgtgctcagcagcctggcaaggattcattactccaaggtttcagtcctggtattgattttcaggattccagactaaattcattttgggaggatggccttgctgataatggcacttttcagggagatattgaactgaccgatctgttaacaagaaaaaatagtgacaagaatgaagacagaattgagaagctctcgaagccagaaacaaaaatgttgacagaaacacctcaagcatatccagatcacagaaatgagatgagagaaactgaaacctgttctgatggatcagaagtgactaatcctcctggagtgcagaagcaaacatcattagcgacacaagttcctgcaaacttgggttgtcttcaggaaacctcaagagaaatgctcaaggttcatgctcatactgaatgtgtaaaaagggaaaagatgtaagtaaatgtgtccttgaaatatcttccttttctatgctgccatctattttatgtattttaaagaggctcttttcattctattgccagagaatatccctgtgttgatttcagtactccattgcatttgaggaacaagattcctgatgttgatcattccaaaagcaattttatgttccattcacctttcgttggaggttcgttgtccactctatcagtaccccaactttcactctgtaccccttctcttcttttttgtcttatgttttctgatctctagaggaggtggggattgagaagaagataatagcaagtgtgtcaccgaacaacagtgatgttcagtataaagttatgcttgaacatcgtgttctccgaaggctttgtgttcaaaagatagtggttgatacaccaatcaagaacaagctagacaaggtaatgttgaacagctaagttgccatatcattctctcttttcttaaaatcatgccaagatggttctatctggccatgttattgggccaaattgcatgtgccctgtgggttcttcttttatgttatgtgagaaagtgcacaaagatattatgctgatgtgcaactttaattgattcactatcaatgtggcaatgcatgccaaacgtcattatcacatatagcattttacaaatgttgtggtctgcttttccccagcagattgattcgtttctcatatgccattttacacaggataatcacttcaggatgatggaggatgggtatcatgtccttccaaaaagtgtttaaacaggtaagcaacaggaatgcagcatgtcttattgtaagatcttgtgttgaagtgagaggtgactcgagtcattgggtgtgattcgtgaagttagaatgaaatgggatacagtatgttaagcattcgcccacattgcctgctacgatctgttacctaagtgattattagggggaaatgattccagtgtttttgtcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0167700, RefSeq:Os01g0167700