Os01g0168200

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Revision as of 04:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0168200| Description = Similar to Thioredoxin-like protein| Version = NM_001048662.1 GI:115434737 GeneID:4325189| Length = 2644 bp| Defini...")
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Gene Name

Os01g0168200

Description

Similar to Thioredoxin-like protein

Version

NM_001048662.1 GI:115434737 GeneID:4325189

Length

2644 bp

Definition

Oryza sativa Japonica Group Os01g0168200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3488348..3490991

Sequence Coding Region

3488739..3488876,3488996..3489118,3489878..3489991,3490113..3490133

Expression

GEO Profiles:Os01g0168200

Genome Context

<gbrowseImage1> name=NC_008394:3488348..3490991 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3488348..3490991 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtcctgtgtgggaaaggaacgcagtgatgaagaagacaagattgacttcaaaggtggcaatgtgcatgtgattagtaacaaagagaattgggaccacaaaattgcagaggcaaacaaggatgggaaaattgtgattgcaaatttcagtgctgcatggtgtggaccatgccgtgtcattgcacctgtatatgctgagatgtcacagacatacccccagttcatgttcttgactatagatgtcgacgagttaatggacttcagctcatcatgggacatccgagcgacaccgacgttcttcttcctaaagaacggggagcaggtggacaagctcgtcggcgccaacaagccggagctggagaagaaagtggccgcgcttgctgacagcgcctga</cdnaseq>

Protein Sequence

<aaseq>MGSCVGKERSDEEDKIDFKGGNVHVISNKENWDHKIAEANKDGK IVIANFSAAWCGPCRVIAPVYAEMSQTYPQFMFLTIDVDELMDFSSSWDIRATPTFFF LKNGEQVDKLVGANKPELEKKVAALADSA</aaseq>

Gene Sequence

<dnaseqindica>2116..2253#1874..1996#1001..1114#859..879#gtatgatgctaaccggaagctcacggcttatacaggagcaacttcccccaaaactcttgccagttcgcgcggcttcaggctttctttggcgccaaatccgccgcccaatcccaggtaaaatctctccccttttctcagattaattgaatccgcctctgcactgctagctcgatgaggttcttggagctagccggtgttctcgccatgccctggatttgtggaatcatggccatggatgcttggcgtttttcctttttttttttttttggcctcgcaactctgtcaattctttgccttctgggctccatacttccagtttggaagaagtcgttgtattgaagatggatgtggatatgaaagaaaagaacaggtgaaatggggtgatgactatgattctgtaccctgtaggtgattgattcttggtcctaaatggtgtcctaccactgataccagctaggattgagactaaagctctttatgttgttcatacatcaagtagttggttaggactatgatctgtgctgtgtaaaatctagcagatgtttggaagttgtatcatgggttgatgataagatggtactatctgaacaacctctaaaaaaaaagttatgttctgaactgaacttaggtgagagactaggtactattcattctttgacttggtacttgtgatatgtgacctgaagagtcattcactcttctttccttgacaacctctgttattggctatcacctaatattgctgcatgaattttgtttgttttctattcatagctcagaaacactttcctgattgaaacacactctaatactgtttgcagttttcccaagggtagtttcttggtttagtcaactactatggggtcctgtgtgggaaaggtcagccttcttgtgaacacggtcaaccgttattttgcttgagcattatgtgattttgtggtgactgctttcaaacccacaagtaatgtttgttgcttctcatgtttatctccccggacaggaacgcagtgatgaagaagacaagattgacttcaaaggtggcaatgtgcatgtgattagtaacaaagagaattgggaccacaaaattgcagaggcaaacaaggatgggaaaattgtaagtaacttgtagaatgcatatatctttactataggtacctgtcaattgtggaaattgcgtaaagtttctgatagtatttacaatatgcatatgcatgggtctggtttaccggtttacatgtaaattgtatctacaacatcatgaaattcatgcgccattcttgtgaaataggaaaacagtgcaaatgtgcatcaaaatattctggaatgtcgtgttttatttatttggaataaaagatgaaacaagttctttggtatatgatatgaacagggagtagcccagattaaagtgtttggaggataatgataaccactgatgcatgctctgttttcttgcacgcactgtaaaatagtttgcattggaagtacagtattacaagtttttgctgtttcttgatgaacctaccaacaaagcattgctctccatgatatgagttggcatgtttaattagtgttgactcttgcctgttaagagagaaccaaattgattaatgccaaaaatgtatccatgttggatgttgcttatatctttagacttaaaagctcaaccttcctcctcccttttaagttgcactgtttagagttcttataactcttatttgccagtattcaaaatttctgctcaaatggacacactatgttatctactgcagtaaattgcgcctgcatatgttttcttcttaatgaagtaagaaagtgtgatctttatgttcccatacaatgtactataaataaagaattggtggaccatttgtaggtgattgcaaatttcagtgctgcatggtgtggaccatgccgtgtcattgcacctgtatatgctgagatgtcacagacatacccccagttcatgttcttgactatagatgtcgacgagttaatggtaaaaccaatgtttttttttcctcctctcccccctctgttatatccataagaacaggtgatagtctctaatgctcttctcagtctcatctgttctgttcttcaaccgattttctttaggacttcagctcatcatgggacatccgagcgacaccgacgttcttcttcctaaagaacggggagcaggtggacaagctcgtcggcgccaacaagccggagctggagaagaaagtggccgcgcttgctgacagcgcctgaggcaaattaagccagtgacaatcagacattattgtcaggaaccccaaagttcagttcagagttcagacgttgccagcaaatatcaattatcatcagaggctgtatgttctgctgaggtgtttcttcagacttggttctgtatatccgtcatgagactgtacagtccccgggtataaagtatctttttttctcctgttaaaatcacacttttgacatgccattttggcactattattgcctgattttaccctggtgattagtgatccgatgtatgttgagtgtgaactgatacagaacaatagggaaatatttttactgtaatattgacaaatgccaggaatggctaccaatctgccatgaatccatgatttatggagttcatgattctagt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0168200, RefSeq:Os01g0168200