Os01g0168300

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Revision as of 04:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0168300| Description = Conserved hypothetical protein| Version = NM_001048663.1 GI:115434739 GeneID:4325190| Length = 3149 bp| Definition ...")
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Gene Name

Os01g0168300

Description

Conserved hypothetical protein

Version

NM_001048663.1 GI:115434739 GeneID:4325190

Length

3149 bp

Definition

Oryza sativa Japonica Group Os01g0168300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3492411..3495559

Sequence Coding Region

3492501..3492833,3493743..3494015,3494976..3495512

Expression

GEO Profiles:Os01g0168300

Genome Context

<gbrowseImage1> name=NC_008394:3492411..3495559 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3492411..3495559 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgccctctcctcctcccggagggccctccacgccctccaccgccgcctcctcctccaccccctcccctcccgccacgctccccccatcccccgccaccacttcccctctcctccctcctcctcctcctcctcctcccgcttcttcaccaccacgcgccccgacgcgaggctactacagctgcatgcgcggcggctcgtggtgggcggggcaaggtcgttcgcggcgggcgtcggcggcggggggtcgtcgaagctggcgccgctggggcagggggtgaaggggctggggctggggcggccgctggacgcggccaagaacgcggcggcgaggtaccgggaggccgtggggctgcaggtggaggcgttctggaggcgcaactacatgctgctcgtcggcgccggggcggtcgtcgtctgcatcgcgctgtggagggtcatgttcggcatcgccagcaccttcgtcgggctctccgagggcatggccaagtacggcttcctcgccctcgccaccgccatggtggcgttcgccggcatgtacacacgctcaagattcaccataaatcctgataaggtttatagaatagcaatgacaaagctcaacacatctgctgcaatccttgaagtcatgggtgcacccttagccggtactgatgtcagagcatatgtcatgtctggaggggggcctaaactcaaggacttcaaatttaggcttggtggcaaaaggtgctttctgatcttccccattaaaggatcagaaagaaaaggccttgtaagtgttgaggtcaagaagaaaaagggacagtacgacatgaagctactcgctgttgacataccaatggcgtcaggacctgatcagcggttattccttgtcggtgacgagcaggagtacaaggtgggtgggggtttgatatctgagctgcgggaccctatagtaaaagctatggctgcagagaaggagtttgattatcttgatgaaagagaggatgcggaggatgaagcgagggagcgtgaggaggctgagcgaagacaacaggaagaggaagctgaagcattgaggcgtgaggaggaaagattacgtgaggagtacgaagaaaggaagcggcaagaagctgagaacctggagaaaaccacttga</cdnaseq>

Protein Sequence

<aaseq>MAAALSSSRRALHALHRRLLLHPLPSRHAPPIPRHHFPSPPSSS SSSSRFFTTTRPDARLLQLHARRLVVGGARSFAAGVGGGGSSKLAPLGQGVKGLGLGR PLDAAKNAAARYREAVGLQVEAFWRRNYMLLVGAGAVVVCIALWRVMFGIASTFVGLS EGMAKYGFLALATAMVAFAGMYTRSRFTINPDKVYRIAMTKLNTSAAILEVMGAPLAG TDVRAYVMSGGGPKLKDFKFRLGGKRCFLIFPIKGSERKGLVSVEVKKKKGQYDMKLL AVDIPMASGPDQRLFLVGDEQEYKVGGGLISELRDPIVKAMAAEKEFDYLDEREDAED EAREREEAERRQQEEEAEALRREEERLREEYEERKRQEAENLEKTT</aaseq>

Gene Sequence

<dnaseqindica>2727..3059#1545..1817#48..584#ccccttcgtctcctccgccgccgcgaacccgatctcgatcccctcccatggcggccgccctctcctcctcccggagggccctccacgccctccaccgccgcctcctcctccaccccctcccctcccgccacgctccccccatcccccgccaccacttcccctctcctccctcctcctcctcctcctcctcccgcttcttcaccaccacgcgccccgacgcgaggctactacagctgcatgcgcggcggctcgtggtgggcggggcaaggtcgttcgcggcgggcgtcggcggcggggggtcgtcgaagctggcgccgctggggcagggggtgaaggggctggggctggggcggccgctggacgcggccaagaacgcggcggcgaggtaccgggaggccgtggggctgcaggtggaggcgttctggaggcgcaactacatgctgctcgtcggcgccggggcggtcgtcgtctgcatcgcgctgtggagggtcatgttcggcatcgccagcaccttcgtcgggctctccgagggcatggccaagtacggcttcctcgccctcgccaccgccatggtggcgttcgccgtgagtgcgctcctccctttctcgctttagctgctatgaactataacaagctatgatagaatgcgcatgcggtgattggtgaatatattctacatcattgtggtatgaatgtttttgtaccttatgactgtctaatgcttaattgtatgcaccgcttctcgaattctggaacttcatcttgatgtttatatcaagcaatacattttttgctgatcatatgaaccgccagcatacctcaatgtagcacttaccatgctaaatatgtcgacactttattatcctgaaatatgccactttgtctgaactaccacccgccttgagcttaaacctcgggttaccaacttaccattagtctattagttttattataaacttaactttggttcacctgagaaccagattcactatttatgatcatagttttgattgaagaattgttacgcggaaatgctttaatcatacaggaaacacaagtacaacctaaaaccttgaaagatgatactctaataaaaaaaatcaaatgatttctagttgatcatgcaccaaagtactaggtaggtgtgctttcaatattacccttgtcttaatgttcttttccgatccgtgtaacatgaacaatattgacttgtggtagactggtatattattttatctaccgaggtgtagcaacaatatggattgcagagaagtatgaagtgaactgtagagatcttgctaacttggaaattatcagaagtctagtttatggtgaacattagagctttatgccactttccatgatcaactttctgtagaggaaacaatgactaactttttttgtttgcctttaagttgtcttatcattttaaatgctcataacacggtgctaccgtcaatctaatatttttagtgcaactttgcttgacagatgcctaagttttgggaggagcaactgatttgtattgtctatttttgttatagggcatgtacacacgctcaagattcaccataaatcctgataaggtttatagaatagcaatgacaaagctcaacacatctgctgcaatccttgaagtcatgggtgcacccttagccggtactgatgtcagagcatatgtcatgtctggaggggggcctaaactcaaggacttcaaatttaggcttggtggcaaaaggtgctttctgatcttccccattaaaggatcagaaagaaaaggccttgtaagtgttgaggtcaagaagaaaaagggacaggtattgaactatttatctctattttgtagcaaagatccaaagattacttcagcaacaattgattgagtaacctccttatgcatggtataatcaagtatatgaatgtacacctttagtgaatgaatagaagtttggacaaatgttgaagcatctcaccctttctctgctttatcacttattatttgatacaattacttaattagaggaaatattggtttctctttgaatgcaatggaaccgttcttttttgttggtcaagaattgttgacacctattttgtacaatgggctgtagcacatttagggcagtcccaaccctccaccttggatggtgtctatggcattaactatattaccatgtaggacttttagcttatgtagcactatattaattaagagagagagtgaagagaggaagaaactgggtctcatgcaagacacaacttcaacacgagaacctatgcactagacactatcaaattttgcattgggagagaatagtgtcttcataatagatgaagaataaatatgattggtaaagaagagagatgatgtatttattaatggcccactttaagaaaccatgggttgtagagtgtagtttctattgtgatgtcttattgacatggcaccttagacactgcttatagacactatgggttgggactgcccttatggtccttgatgtcatatccaacccttttttatcgtgttgatgatatatctgaccttttctactgtttctgtattactgctatgttctttccttccccttgccattcagaaaacactgcatgactgcatgtgctatctaaagaaaactaacaccgaaatctctacccacttgagacagctagaagcaatacatttttacaacaagagtcctgaccttattctaatttctttgcagtacgacatgaagctactcgctgttgacataccaatggcgtcaggacctgatcagcggttattccttgtcggtgacgagcaggagtacaaggtgggtgggggtttgatatctgagctgcgggaccctatagtaaaagctatggctgcagagaaggagtttgattatcttgatgaaagagaggatgcggaggatgaagcgagggagcgtgaggaggctgagcgaagacaacaggaagaggaagctgaagcattgaggcgtgaggaggaaagattacgtgaggagtacgaagaaaggaagcggcaagaagctgagaacctggagaaaaccacttgacacaattaaccgcatcgattttttcgtgttgtgcattttgttcttccccaacactccacactaagtagcaaccaacgtttcaacagcgac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0168300, RefSeq:Os01g0168300