Os01g0168500

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Revision as of 04:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0168500| Description = WD40-like domain containing protein| Version = NM_001048665.1 GI:115434743 GeneID:4325192| Length = 4585 bp| Defini...")
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Gene Name

Os01g0168500

Description

WD40-like domain containing protein

Version

NM_001048665.1 GI:115434743 GeneID:4325192

Length

4585 bp

Definition

Oryza sativa Japonica Group Os01g0168500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3504759..3509343

Sequence Coding Region

3505718..3506479,3506639..3506897,3508427..3508550,3508922..3509030

Expression

GEO Profiles:Os01g0168500

Genome Context

<gbrowseImage1> name=NC_008394:3504759..3509343 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3504759..3509343 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctcacaagtctccacatcacggggtttgccctccccaagcaagcttgggacatttgagtcccctcacacatggcaaatgtcaggtcctacaggccaggctgaagctggtagcagcgatgaccaggatatcaggctgttgtctgtttcttggaatcaggactttggttgcttcgctgctggaaccagcaatggcttcaggatctttaattgtgacccttttaaggagactttcaggagggatctgaagagtggtggatttgggattgttgaaatgctgttccgttgcaacatccttgctcttgtaggtggtggctccaacgcacattatccaccgaacaaggtaatgatctgggatgatcaccggagccattgtattggagagtttgccttccgctctgatgtccgggctgtaaaattggggaaggactacattgtcattgttcttgagcgcaagatatacgtttataacttcacagatttgaagttgctccatcagattgagacccagtccaatccaaaaggattgtgctgcctctctcatcattccaacacttcagtgttggcctgccctggggtgcatcaagggcatgtccgggttgagcattttgggttgaaggtgacaaggatgatttcagctcatgattctcacatttcttgcatggcattgacaatggatggcctcctgctggcaacagcaagcatgaagggtactttgataagaatattcaacacaatggatggtactcgcctgcaagaggtgcgcagagggcttgacaaagcagacatatacagcattgcgctatcacccaatgtgcagtggttggcagtgtccagtgacaaaggaactgttcatattttcagtttaagagtgagagttgcaggggaagatgctagtaatgaacagcgcagtcttgaaggtccacggatggatcaccagaactcttctagttctatagatcctcttattcaaacgaacactggatccaatgctagctcatcattgtcattcatgaaagggattctgccgaagtatttcagttcagagtggtcatttgctcagttccatttaccagaagtcacacgttacatagtagcgtttggtgctcaaaacactgtcatgatggttggcctggatggcagcttctacaggtgcagctttgaccaggttaatggcgggcagatgctgcagaaggaatatttccggtttatcaaggctgacctcacccccctgaggacctcggccccctga</cdnaseq>

Protein Sequence

<aaseq>MSSQVSTSRGLPSPSKLGTFESPHTWQMSGPTGQAEAGSSDDQD IRLLSVSWNQDFGCFAAGTSNGFRIFNCDPFKETFRRDLKSGGFGIVEMLFRCNILAL VGGGSNAHYPPNKVMIWDDHRSHCIGEFAFRSDVRAVKLGKDYIVIVLERKIYVYNFT DLKLLHQIETQSNPKGLCCLSHHSNTSVLACPGVHQGHVRVEHFGLKVTRMISAHDSH ISCMALTMDGLLLATASMKGTLIRIFNTMDGTRLQEVRRGLDKADIYSIALSPNVQWL AVSSDKGTVHIFSLRVRVAGEDASNEQRSLEGPRMDHQNSSSSIDPLIQTNTGSNASS SLSFMKGILPKYFSSEWSFAQFHLPEVTRYIVAFGAQNTVMMVGLDGSFYRCSFDQVN GGQMLQKEYFRFIKADLTPLRTSAP</aaseq>

Gene Sequence

<dnaseqindica>960..1721#1881..2139#3669..3792#4164..4272#gctttgcctgcctcgcttcgctcgcatcacgtggctccgcctcctcgtctccctccccccgcacgcatcaccatcctcctcctcctcctccctcccgcgaccaccccgtgaggtaacctctcctcctccccctcctccctcctcccacccctggggattcggatcccacctcgcgcgctcggcccgatcccgccctgattcttctggaaccttccgcgcgctcgattcgtgctccgccgacgcccgatctcgcctaggttggttgcttctccttccttgccgctcaccggagcgcgggtaagcgggtgggtggggtttggatgcgcgcgtgagggatcccatcgggggtgctcgtacccgggggggagcgagccattgatcggggttgcgcgtttaggttttcccccgctgcgattcgatccgggtggcgccgacgcgaatccgcgcgtgtttgagctgggattggtgatgtttggtcgtgttgtttgatgcttggggactacgttacgttttgctgtatggcgaggtagagccgattggcgtgtgccattgtgcgagtttcatcgtgttcatgttcttatcaattttttttatctcacgcttgtatattagaatttatatgccccaacgatatagtttcaactgctaatgtgggtgccttttcctgcacaaatattgtgattacagaagcaatgcgctcggttctttttttttttttttttggggggggggcgattattgtcaattgtgtatggaaatttgacgctcttttgggtgattagctgatcatattaattacaaggaggatttgttttagccgatgttgattgtcttctaggtgctttaggatccccaatgcttaactgttgttttgctcttgctgacacagcaaatctctctgtggtgtaggtgtatacgctacatttacaattgattgatctggcttgtccacccctcacatgagctcacaagtctccacatcacggggtttgccctccccaagcaagcttgggacatttgagtcccctcacacatggcaaatgtcaggtcctacaggccaggctgaagctggtagcagcgatgaccaggatatcaggctgttgtctgtttcttggaatcaggactttggttgcttcgctgctggaaccagcaatggcttcaggatctttaattgtgacccttttaaggagactttcaggagggatctgaagagtggtggatttgggattgttgaaatgctgttccgttgcaacatccttgctcttgtaggtggtggctccaacgcacattatccaccgaacaaggtaatgatctgggatgatcaccggagccattgtattggagagtttgccttccgctctgatgtccgggctgtaaaattggggaaggactacattgtcattgttcttgagcgcaagatatacgtttataacttcacagatttgaagttgctccatcagattgagacccagtccaatccaaaaggattgtgctgcctctctcatcattccaacacttcagtgttggcctgccctggggtgcatcaagggcatgtccgggttgagcattttgggttgaaggtgacaaggatgatttcagctcatgattctcacatttcttgcatggcattgacaatggatggcctcctgctggcaacagcaagcatgaagggtactttgataagaatattcaacacaatggatggtactcgcctgcaagaggtgaacaacatgttctttctttttttctttcgtagacaaacagaagggtgtcttctctattccattgcttcctgagttgttgccttagaagtgtttctggtatatgtaatcgtggacaattggcatgaatctttaatgatcaatctgaataacttgtaggtgcgcagagggcttgacaaagcagacatatacagcattgcgctatcacccaatgtgcagtggttggcagtgtccagtgacaaaggaactgttcatattttcagtttaagagtgagagttgcaggggaagatgctagtaatgaacagcgcagtcttgaaggtccacggatggatcaccagaactcttctagttctatagatcctcttattcaaacgaacactggatccaatgctagctcatcattgtcattcatgaaaggttagtatatctctctgttttcaccgttcatagtaactgctcaggacatggaacttctggaatagattgaatcgtaatttttcaactcctgtacggattagccttgtcagttcaagaagctgttctgcatatcacgttgactgtttttccatatctttttttttaaagttttgcgcttctgatgattgatgaaatgatgtgatgaatcttcaagttagcttttgctggaaaggcatctgaaaatgtaaacttttttaacttaataacttaattgacgatttcttaaaaaaaataaaaatggtgtgaaatgtttaaggaatgcatgaccagataaaatcaggcaagttattaccgtgaagcagtgtggtaaaagtcagctgatacgcctgtataattggccatttattcatgtgtgaaaaggaaagcgtcatgtacttgtaattcagtgcaggattttgctcagtgaacgccaaagtggccaactggaccaattaattggtcaattaatggttaatcgtcttattaatccgctcaatcaacgcattaagacaagtaatcttctctagtgtgtatgggcctgtagcttgcagctggcccaattaattctaagttagggcaagttagcagacacgttgcttccttggctagcttccacttgttttgcagcataattattatggtgctgctttccactttgtttctagtattccaatgtacgatcatagcatgatgtgcagcaaaaaatagtttatgcatttcatagtcaacaagaaggttgaaaacattgtgtatgtatgacccatatcttgttactgagtatcatcattagttacagattattgatgatatttccctatttgatttgttacagtacaaatggctagtacaagaaaatgtatttaaatatctccaataacaaacaactagcaaatactacctccgtcccaaaataagtgcagccatagatatccgtgtccaacgttttaaccgtctgtcttatttgaaaattttatgaaaaaaaattaaaaatattagtcacacataaagtactattcatgtattatcatctaataacaataaaaatactaatcataattgtttttcaaataagatgaacggtcaaacgttgagcatgaatagtgttaaaactgcacttattttgggacggagggagtatatattaatttatatgaacgttaaatatccgtagaattctgaataatcaaccatattatgactatttgcttgatgccttgacggtacattgtctgttcgatacccattttcggacttttgcaacactgctgcaaagaattactgtacaaagctacgtagtcagcagctcagcatcgacagcaagaacacgtgttatttatcaactctctattgttctctttaaaacttgtactgcattagtttctcaatatgttgattgttcaggctattgttttctctatctgtatatatgttgaaaaatttgtgttcatttcttgaagaattaagttactaaccgtgctaaatttctctagggattctgccgaagtatttcagttcagagtggtcatttgctcagttccatttaccagaagtcacacgttacatagtagcgtttggtgctcaaaacactgtcatgatggttggcctggatggcaggtacttgcctctacactgaattttatatcagcaacgtaacacatgaatggaatatacatccccagtgcatgctatagcaggctaagcagctgtacagtcaacctttgctgttctcagtcattgcacaagtatactgtacatgacgtattaacttcataataccacatacttagaaattcataagcaaacaaatatactcgtagaaagaggacaatacgtggtgcaggatagtacagtataaaaagttgttcttagctaatttatttgatttattagatattttcctatagcagatagctatctctgcattttcctgctgcatttggttgaaattttcgccaactaattgagtcgaaccttggctttttcagcttctacaggtgcagctttgaccaggttaatggcgggcagatgctgcagaaggaatatttccggtttatcaaggctgacctcacccccctgaggacctcggccccctgaactgcgtgacgaaatcatatcaccttgataacttgtatatataaaggttgtgctcagtccattgtatataaatgccgtcctctcgccggcaaagttctaggtagccggaataaggagagctgggtgttcgatcgcaacctacttccaccctcattctgaagcatttgtccccccgtcgaaattgcagctagttgattttagttttctttcctttcgatgaacacaacttttcactgatatatatatatgacataaaagctcaagaatgaaatacaaatctgagcttatattgtagttctacttctgcaaggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0168500, RefSeq:Os01g0168500