Os01g0168600

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Revision as of 04:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0168600| Description = Similar to Auxin-independent growth promoter-like protein| Version = NM_001048666.2 GI:297596175 GeneID:4325193| Len...")
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Gene Name

Os01g0168600

Description

Similar to Auxin-independent growth promoter-like protein

Version

NM_001048666.2 GI:297596175 GeneID:4325193

Length

4505 bp

Definition

Oryza sativa Japonica Group Os01g0168600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3511047..3515551

Sequence Coding Region

3511047..3511233,3512131..3512198,3512285..3512373,3512607..3512769,3512846..3513135
,3513231..3513435,3513518..3513675,3514091..3514244,3515522..3515551

Expression

GEO Profiles:Os01g0168600

Genome Context

<gbrowseImage1> name=NC_008394:3511047..3515551 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3511047..3515551 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggcggcggcgagcgccgtggtgtggacggcggtggtgcagctggcgtcgatcgccgggctgtggaggccgcgggtgctcgccgactgcggcggcgggggcggcgccgccacggggctcgccgcgctcgccggcgaggaccgcgtcgcggcgaggctgtcgccgccggcgctcgtgcccaggagaatttataagagcaatggctatttactggtgacttgcaatggaggactcaatcaaatgcgagctgggatatgtgatatggtgaccatagctcgctatttgaatctaacattagtggtgcctgaactggataagaggtctttttgggctgactcaagtgaatttggagatatctttgacgtcagtcacttcattaattcgttaagagatgagctgatgattgttaaggaacttcctatgaaactcaagttaaaaactaagagaagactttactcaatgccacctgtgagctggtccaacgagacatactatctaaagcgggtattacgtcttgcaaggaagcacaaagtgatccatttcaataaaacagatgcccgccttgcaaacaacggtcttcctgtcaagctccaaaggctgcgttgccgtgtcaactttgaggctttgagattcaccccacagattgaggcccttggacgaaaacttatctccacccttcaaaaaagtgggcaatttgttgttctacacttacgatatgaaatggatatgctttccttttcgggctgcacacacggttgttctgatgaagaaaccgaagagctcactagaatgagatatgcatatccatggtggaaagaaaaggagatagactctgaggttaagaggtttcagggactttgtccccttacacccgaggaaattactctggtgcttaaagctctaggatttaaaaaggatacactgatttatatagcctctggtgaaatctatggaggtgaaaggcggttggcagctttgaaggctgcatatcctagattggtacggaaggagaaacttttatctcctgaggaattgcagccattccagaaccactcaacccagatggcagcactggactacatggtttcaatagcaagcgatgttttcatccccagttatgatggaaatatggcaagggttgttgaaggccatcgcagatacacgggcttccgcaagaccatcctattggacagggtgaaacttgttgaacttttggatagtttccaaggaggtgcaatgtcctggaatgaattctctgctgctgtgaagaaggcacaccagcatcgcatgggtcagccgacagaaagaaagggagaaacaacgggcatgatgaattcgtaa</cdnaseq>

Protein Sequence

<aaseq>MRAAASAVVWTAVVQLASIAGLWRPRVLADCGGGGGAATGLAAL AGEDRVAARLSPPALVPRRIYKSNGYLLVTCNGGLNQMRAGICDMVTIARYLNLTLVV PELDKRSFWADSSEFGDIFDVSHFINSLRDELMIVKELPMKLKLKTKRRLYSMPPVSW SNETYYLKRVLRLARKHKVIHFNKTDARLANNGLPVKLQRLRCRVNFEALRFTPQIEA LGRKLISTLQKSGQFVVLHLRYEMDMLSFSGCTHGCSDEETEELTRMRYAYPWWKEKE IDSEVKRFQGLCPLTPEEITLVLKALGFKKDTLIYIASGEIYGGERRLAALKAAYPRL VRKEKLLSPEELQPFQNHSTQMAALDYMVSIASDVFIPSYDGNMARVVEGHRRYTGFR KTILLDRVKLVELLDSFQGGAMSWNEFSAAVKKAHQHRMGQPTERKGETTGMMNS</aaseq>

Gene Sequence

<dnaseqindica>1..187#1085..1152#1239..1327#1561..1723#1800..2089#2185..2389#2472..2629#3045..3198#4476..4505#atgagggcggcggcgagcgccgtggtgtggacggcggtggtgcagctggcgtcgatcgccgggctgtggaggccgcgggtgctcgccgactgcggcggcgggggcggcgccgccacggggctcgccgcgctcgccggcgaggaccgcgtcgcggcgaggctgtcgccgccggcgctcgtgcccaggagtgagtgcccctcctcctcctcttcgtgctcctctctgcttctcctcccctcgcgctcctagcaaataggagtagtactcgagcttgcgcgatctgtgtgggagaggggaggtcgtggcttctctgattcgggcggttggggcgagtcaaatgcggttgcttggtggtcaaaggaggcgcgtttcgtgctggttcggttcgatctcgggctcgaattggcggttttgaccaggttttgtgccattttggggatctcggggggttgaattgggcgagaactttctaaatttgcgatgatttgttgggatatatcatggattatttagcggaggtcatcctttggtagctcgaatgagattcttctcagaacctcgacccaaatgtgggttcatatcttcaacctctgttgctcgtatgctataattagtagttgtttatttaatttaatttacttatagaaaactcccatatagcccagcgctttgggcatgaaatgggctctggaataggtgatgtgaattggtaaatgaacttatttgctttgaagttaaaagggattattatatatttattattagacgtgtgtgttccatgagaaatgggaatcatatagtaatatagcgcagtaggagcctctcctactgttttctgtcaaataaaaagaaaagaagtgggaatcataaattcatgatgtaagcttttcaacaacgatgtgtcaaacaagctccgattgatgcaaacttctactcctttattattgccaaattgatttttttgcttgtagcttgctagcagcttcattgtagaaacacataactagaagacaattcacatatcttgttgtctcagtccttttgttggtactagagctgattggcatcttgttgctttttgcaggaatttataagagcaatggctatttactggtgacttgcaatggaggactcaatcaaatgcgagctggggtttgtaccttagctattgtagcttgagctagctcatccactcattttaaattcgaatataaatttcttataatgttgttttacagatatgtgatatggtgaccatagctcgctatttgaatctaacattagtggtgcctgaactggataagaggtctttttgggctgactcaaggtataatttcccacataaccttcatttctgtaatatcaacagcatgtctgtttgatgaacaattttatcctagtttgctgttgtgaacatgagttatcatcccttgctattgtaaacagcattcatctccatatttgagaatgaactatgatttttgcaagtgaaaatgtagccgaaccacagtaatttctgttgtgtttctatttcaaaagtatcttttaattttttttcagtgaatttggagatatctttgacgtcagtcacttcattaattcgttaagagatgagctgatgattgttaaggaacttcctatgaaactcaagttaaaaactaagagaagactttactcaatgccacctgtgagctggtccaacgagacatactatctaaagcgggtaataaaagtttgtttgttctggctgtgtttaacagcacttaaaaaaactgtcatctgacagattccctatgcaggtattacgtcttgcaaggaagcacaaagtgatccatttcaataaaacagatgcccgccttgcaaacaacggtcttcctgtcaagctccaaaggctgcgttgccgtgtcaactttgaggctttgagattcaccccacagattgaggcccttggacgaaaacttatctccacccttcaaaaaagtgggcaatttgttgttctacacttacgatatgaaatggatatgctttccttttcgggctgcacacacggttgttctgatgaagaaaccgaagagctcactagaatgaggtttgtctgtaatgatttgcattactagttaacgctgacttgctgtactgatttgctactttaatagatatgaacgaatcgtctttgaactgtagatatgcatatccatggtggaaagaaaaggagatagactctgaggttaagaggtttcagggactttgtccccttacacccgaggaaattactctggtgcttaaagctctaggatttaaaaaggatacactgatttatatagcctctggtgaaatctatggaggtgaaaggcggttggcagctttgaaggctgcatatcctagattggtgagcaggttctcccatttaaggtgtcccctttagatttatcatggatgctttatagtagctcactttgatcttatgttaggtacggaaggagaaacttttatctcctgaggaattgcagccattccagaaccactcaacccagatggcagcactggactacatggtttcaatagcaagcgatgttttcatccccagttatgatggaaatatggcaagggttgttgaaggccatcgcaggtttgcttctccggaatctaatccaactagagttcactcatggtttgtttttgacattagtaaagaactgcttgggctcctgtgcattctgaattcttacaaataactacaaaaaagaaaaaaaaatcagtgactttaaaactacttaggtccccatcggttggtctagtcatattataagccataacgtcttattagcgattaaaaaatgatatgtgagtaaaacttttgtatatatgttcttagtgattgaaaagccaaagttgaaaaaaaactatgttgaaaaagaatcaaattcaaattcaagttttaaaattcaaattttggctttggcttataagccatagggcaaacgatgaggcccttaactcaatgttctgtatgctgaggagccctttttgttcatccattttagatacacgggcttccgcaagaccatcctattggacagggtgaaacttgttgaacttttggatagtttccaaggaggtgcaatgtcctggaatgaattctctgctgctgtgaagaaggcacaccagcatcgcatgggtcagccgacagaaagaaaggtcatccctggccggcccaaggaagaggactatttctatgctaatccccaagaatgccttggttcaagggagggattaagagatattttgtgatagtgctttctgaaagttgcagcccaaccgatgaatattggttcctgcagcgtctgccatagtcgacgcgagcactttttgtacagctgaccagagttcttccttcataccgagaatttacttcaggtacaggctagttgacatctcaaatgtttataactggattccctcacagaaataaagctgaaaagaagctccaaatcaacgggttcagacttcaaagaagagacgagcatccaatctgctcatttctcccatcagttatacttatgtaattcttgattagttagttggtcaggttttccatttcattccattcttctgcttcttttgtttccattgtttaggggcagtgtaacactcttgactctgatcatactgatgtagaagttcagtgtcctcatagtgttccccccaccttctctgaggagtttcctcaaagccttttgtagtactcaccaaaactattggtaattttttttgggttcattacagaaatttcctgtaacacattatttttttaagtgagaaatcaagatatggcggatcattctgtttctttccaccaactgatccacttggaagcatggatggcatgttcattatatattgctcaacatgtgtatagaatcaatgtctatatgtggttgttgccatcttctgtacattgacctgcaaatctgcaactgcaagggaatcagatggttcagctcccttgcacgctcagtttcaacctaatggtttttacttattggcagtttggtagcagagaagtatactctatgatagtattagaagatagcatcatctttggcaggtccagtagtataatgtgacaacgattcctcgatggttcattgtcattgtgcgtgtataatattgtggaatccaatgtgtgttttgtcagtgcaagtttcgcggataaatggatgatggtagaattttgccagtcattttctgccggtgtcaaaaaattctcttgaatgtgaagtgtggaagaatgtcttctctgctagtctgtcctctcttcattagatatgatttgccttagggcaaaagtctgtaactcaatgcttgtactattaaacctctttaatcttaatggaagatacaggtgggaatctctcccctccggtgattatttcaaaagaaaaaaaaaatctcttgttgtttccaaaacttagggagaaacaacgggcatgatgaattcgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0168600, RefSeq:Os01g0168600