Os10g0466500

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Revision as of 08:41, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0466500| Description = CCT domain containing protein| Version = NM_001071340.1 GI:115482423 GeneID:4348845| Length = 2923 bp| Definition =...")
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Gene Name

Os10g0466500

Description

CCT domain containing protein

Version

NM_001071340.1 GI:115482423 GeneID:4348845

Length

2923 bp

Definition

Oryza sativa Japonica Group Os10g0466500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17678900..17681822

Sequence Coding Region

17678990..17679022,17679767..17680026,17680426..17680582,17680670..17680843,17680986..17681111
,17681261..17681362

Expression

GEO Profiles:Os10g0466500

Genome Context

<gbrowseImage1> name=NC_008403:17678900..17681822 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:17678900..17681822 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcgacgacgtcgacgacgagcctttcgccgatggcatctcgagcccgatagcgcagcacatctatgacttctgcgacgacggcaacggcggcgacctcttcgcggcggtgaacgcggcggcggcggcagggtcggacatgttcacggcctcctcggaggacgcgtccgcctcgtcgtcgtcgacggccaccgcgcccatcgccggcggcggcgacaccctgtcgccgccgctgccgtcgctggactccacgctctcggctctcctcgagcaagacgagccgcccggcgccggcggcggcggaagcatggtgatgtcgatgatgggaatggacgagatcggcgagtaccagcggatgatggaatgcggcggcgcgcttctcggcgccacccacgccgccgacggcgccgacatggccttcggcaacgccgccgccgcagagttgcagatgggcggaggcgggagtagcccagcgcggctgccggcgacggggacgacggagacgacgagcttggaggacacgagcttcaagaccgtccgcctctccaacgaggagaggaaggaaaagatccacaggtacatcaagaagaggaacgagaggaatttcagcaagaagatcaagtacgcttgcagaaaaaccctcgcggatagccggcctcgcgtccgtggtaggttcgccaagaacgacgactactgcgaggcatccaggtcgatcggctcgcagaatcacgaagagtatgaacaaattggcggcgtgaagggagaagacatgcttgattctgacgctctagcgcatatcagcgggatgagctcatacatgtacaatcacacagtggaatcctggatataa</cdnaseq>

Protein Sequence

<aaseq>MLDDVDDEPFADGISSPIAQHIYDFCDDGNGGDLFAAVNAAAAA GSDMFTASSEDASASSSSTATAPIAGGGDTLSPPLPSLDSTLSALLEQDEPPGAGGGG SMVMSMMGMDEIGEYQRMMECGGALLGATHAADGADMAFGNAAAAELQMGGGGSSPAR LPATGTTETTSLEDTSFKTVRLSNEERKEKIHRYIKKRNERNFSKKIKYACRKTLADS RPRVRGRFAKNDDYCEASRSIGSQNHEEYEQIGGVKGEDMLDSDALAHISGMSSYMYN HTVESWI</aaseq>

Gene Sequence

<dnaseqindica>91..123#868..1127#1527..1683#1771..1944#2087..2212#2362..2463#gagcttttctcctcttcaaattcccattccgttgatgagcctctaccttctcagtatcaatttagagcattccttggtgcaagatccatcatgctcgacgacgtcgacgacgagcctttcgccgtaaatctcctgaaagcaaattaggctcaattctgcagttatttgcaagcttcagtcagtttcagcatggttgttttcagcagtttctgctgttgttattctgcatgcatatggtctgataatttattttgcattctgcttgcccatgcatattaggattccatagcaatggcaattggcaaatgctaatgctctgatcagattttgctagagcaataattgttaggtggctatcatactaaagcggaaaggggcaccagatcctgcgaaaatctttctgctttttggacctcttgcagtacagatgggaatcgatgcctcgacttgatagtttctgcttcctaatctccacgagctttatgacattgcgcattggaatttttgattagttgcctgatcctaacagtaacattccccccagcatacggcatacggacctatacctctactgttcttgacatcttcagagatttcagatttcagatagaacagtataatttgcaaatacaacagtatggcatttgattccttgcaaaaaaagagattataaaagaatcatagaaatgggtttaaatagcctaatacaaatctgtaaatcaccgttttgtcaattcaggattttggcgatgaatgtttgcattgcacaggcctgtagaagaatacagtttttttttctgaagaaagaaatggttacgagttggtggtttgatggtttttgtctgaattttgtttttgtttttgcaggatggcatctcgagcccgatagcgcagcacatctatgacttctgcgacgacggcaacggcggcgacctcttcgcggcggtgaacgcggcggcggcggcagggtcggacatgttcacggcctcctcggaggacgcgtccgcctcgtcgtcgtcgacggccaccgcgcccatcgccggcggcggcgacaccctgtcgccgccgctgccgtcgctggactccacgctctcggctctcctcgagcaagacgagccgcccggcgccgacggcgagctcctcctccccatcgacgactacgcgttctccgccgtcgacgagacgcagccaccaccaccaccggagcatcagcagcagcagcaattcacccagatgcctctcccggtgatgggcggcgcggcggcggagcacccggcgctgcaggcgcagctgagcagcaccgccaccgagctgatgcagtacgccgggttcaccgacgaggtcttcgcggcggcgttggccgctggagccggagctggggcgggagggtacatgggcctggacgacccgctctgcccgcagcagcagcattccggcgcgatgctccccgccgccgccgccgccggcgaggcgttcttcagcaaggacgcgcacgcggcgcaggccgccttcttcgccgcggccggcggcggcggcggaagcatggtgatgtcgatgatgggaatggacgagatcggcgagtaccagcggatgatggaatgcggcggcgcgcttctcggcgccacccacgccgccgacggcgccgacatggccttcggcaacgccgccgccgcagagttgcaggtaggacattgccgccatgcaagaacctctcgcgcacgcgcagcatgacgccatgaccgtttcaccatggtggtcgtggtgccacagatgggcggaggcgggagtagcccagcgcggctgccggcgacggggacgacggagacgacgagcttggaggacacgagcttcaagaccgtccgcctctccaacgaggagaggaaggaaaagatccacaggtacatcaagaagaggaacgagaggaatttcagcaagaagatcaaggtgaggcaagaacttccaaattattcaaattcaaattcaaaatatcacccccccccccaacccatatttcaaacgaatttcacctcaccgccgaccacgttactgacatctcagattttttttttaaaaaaaaaatctgcagtacgcttgcagaaaaaccctcgcggatagccggcctcgcgtccgtggtaggttcgccaagaacgacgactactgcgaggcatccaggtcgatcggctcgcagaatcacgaagagtatgaacaaattgtaagcattcaaatgccaagaacgccctcaaaaaaatctttaaaacaaagtgatattatcggtttgaaacttgggattatatttacgaagtgaaatttggcaatgatttgaggactttttgtccttttttttttgtcttgaatttgcagggcggcgtgaagggagaagacatgcttgattctgacgctctagcgcatatcagcgggatgagctcatacatgtacaatcacacagtggaatcctggatataaactcatacgacacagcactgagaaactctctcgaattgctttttctttttttttccaccctattttgtgcagatttaaccggtcctttacttcaaacctctgaataattttgtagaaatttgatgtatgttgatcagctggagttgctgtagggtcggtctgttgtcatatcaatctgcttttcacttgtttgtcattcttgcaggtgaatgaaatagatagagttaatttgcataatttgtatagatacaaatgtcgtgtgtacttaacgatgttagaaggcattttgaaatgcctagtatgttttgaggtggtcctggaaacggttgagaaaattggagcagggaaaatcaatatagatttaggcctttagcaatctgagggtgtaaaggaaaaggatatatttgcaaatgtttgacggtataatacctctatatgaatatattatactattgacttt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0466500, RefSeq:Os10g0466500