Os01g0172300

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Revision as of 04:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0172300| Description = Conserved hypothetical protein| Version = NM_001048687.1 GI:115434787 GeneID:4327646| Length = 3008 bp| Definition ...")
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Gene Name

Os01g0172300

Description

Conserved hypothetical protein

Version

NM_001048687.1 GI:115434787 GeneID:4327646

Length

3008 bp

Definition

Oryza sativa Japonica Group Os01g0172300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3719138..3722145

Sequence Coding Region

3719400..3719453,3719522..3719588,3720220..3720310,3721155..3721348,3721781..3721935

Expression

GEO Profiles:Os01g0172300

Genome Context

<gbrowseImage1> name=NC_008394:3719138..3722145 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3719138..3722145 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccctcggtggcggtggcggtggcggtggcggaggcgagggcggatcggcgtcgagggtcggggactggggtgttgacttgggggaggggtgggactggaggagcatcccgaagctcctctcctccgcctgcctcttcatctgctccggaggctgttttggatgctgtgataaggctgtgagacatgtaggacagctttcaaagagtttaattactccggaccaaaattacaccattggggacgaactctggagcacaaccaccatcgaggtcgaacagtcatgggctcttgatcagcaaggagtggggagcagtcagggccctactgaatttgtcaatcatggtcttgttctttggaaggagattaggaaggactggactgcgaaaacaaggcaaatacctgagacgaaacagattcgcgaaccaatattgagttggaatgcagcctatgagagtttgcttggatccaataagccgtttcatcagcccatccctctacatgagatggttgattttcttgtggacatctgggaacaagaggggctgtatgactag</cdnaseq>

Protein Sequence

<aaseq>MAALGGGGGGGGGGEGGSASRVGDWGVDLGEGWDWRSIPKLLSS ACLFICSGGCFGCCDKAVRHVGQLSKSLITPDQNYTIGDELWSTTTIEVEQSWALDQQ GVGSSQGPTEFVNHGLVLWKEIRKDWTAKTRQIPETKQIREPILSWNAAYESLLGSNK PFHQPIPLHEMVDFLVDIWEQEGLYD</aaseq>

Gene Sequence

<dnaseqindica>2693..2746#2558..2624#1836..1926#798..991#211..365#agcgcagcgcactctgtcaaatccgtgcaatctccgccatctccctctcaccatcttcctcctctctccccttatcccaaatttccccatcaatcgccacccgcgcccaattcccccactcgattcgattcgactcggtcgggatccccccatggcgagcggcgcctcgtagcgacgaaatcgagccagcgagtggatgcggcgcgcgccatggcggccctcggtggcggtggcggtggcggtggcggaggcgagggcggatcggcgtcgagggtcggggactggggtgttgacttgggggaggggtgggactggaggagcatcccgaagctcctctcctccgcctgcctcttcatctgctccgggtcggtccccctaccctatctcgattgagttcttacccttttttttttgtccggctaggagccctaagcgagttgagtccactgcgttgttgcttgcgtatacttgcatactgtggagatcggcgtaattatgcggggattgcgagttaatcaaagtcgtaggcatattgttttttttttaccgaatgttgattgcttgttttgtttgcatattatgtatttatgtggtctcacggattgtatgatagatgtgttaattaatggaatcttgcttgatttctcctactacttgtggcagtagaaggggcattgtcagttggtctagctgggctatttcttgtttgcagttgtttcttgatttctagatttgcattgattgtttttgttcgatgctaattgtcgacatggttaaactccttgcgaacagagcagaggctgttttggatgctgtgataaggctgtgagacatgtaggacagctttcaaagagtttaattactccggaccaaaattacaccattggggacgaactctggagcacaaccaccatcgaggtcgaacagtcatgggctcttgatcagcaaggagtggggagcagtcagggccctactgaatttgtcaatcatggtaattcctttttccaattatgttgtcatatttgctaaaatggaatgtttttgctacatgtgcacattgccattggcattgactaggcatctttcaatattaggtggaattaggtatttatttatgtcctggttgtgggaatgaaatttagatgtagcaaaggaacctgtttaagtgtatagagtaaaacattttccttccaatcaaccagcctctattatccttatgttttgtgctttcgcctgaaatagatatccatggtcttagctcgcctataaagtgttaaaaatttccaaggcttgagatgacctcactatttctggaacttattgggtacctattggcctatcatgatcaatgtatttggtttactatgtcctgtttgttttatgtttctcatcaaaattaatacatattcagcaacatcatgtccacatcgccatcttgcacaatatctggtatactttgctacttcctctgttaaaaaaatagctgttggttttgacttcgagttatcaagcttggaccaataatattttctaaacaatagaagtatttagcatcaaagttgtattgttagatttataatccaaagtactgtagtaatatcttacatataaacctattcattttgaggttgcttgaaaatttaacagtaaaaagttcatatgctcttagtcaaaaccaagtatttgtaaacagagggagtactagatttgatctgcagagaatttgaatataaacatattgcctcatcagaacagtgattttcttgctaagcaacaaacagatatagaagttcaagttgtcatgttaacacactcagtttgaaatattattacaggtcttgttctttggaaggagattaggaaggactggactgcgaaaacaaggcaaatacctgagacgaaacagattcgcgaaccaatattgaggtaagaacttgagattccctatttatatgcagaaaagggctagacaatatatattttccagaatccaacctagtccatagaaaactagagtttgttgttccaaagtttgagattagtctggggtggttgttttgatcaatgtgatttctgttatgctgggttctttcactttttcctgtcttttcaaacgatactcgattatgaaagttttactttatcaattcttttcctatcctaacccatatgtattatggtgcatgtgcccatgcaacagcaatttatttatttctacatgaattatgtgttatgaattctgaagttctatatcacattgtttttgcatcctgtccttaatgtataattttttttccctgtgtagtccggtattccttttacaaacaatataataagtacatatcatcaaattcggtagctgctgttgatctttcacaaaagattctgaaaacacgcacttaaaagtcaaaacataaactggatactttttcttgttcttctaccattccttttgttcaaattgatgttggattcaaatgcttcttactgtgtttaatttagtataatgcatgctgaacctgaagcttcatgctcacctaaacatttacttgtatagttggaatgcagcctatgagagtttgcttggatccaataagccgtttcatcagcccatccctctacatgtaagatgtactgctgttaaatttacccatttgaggcaagtgcttataactatatcatgaatttgcaggagatggttgattttcttgtggacatctgggaacaagaggggctgtatgactagcacaaatgtttttaataatagtaacatagttgtaggcttgatgatgatgaggtaactttgaggtaacttggagggttcggcctgccatacttgtttttgaatggcggccagttgtacttgcttaatacaaggttgtggttgttgtaatgtgagaaaggtcgagatttagacgctttgtcgaattgtcaaagaaagcaaagccagagagaaatttgtaacactaactcatggacattaatgtgatgtgtgtcgatagagaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0172300, RefSeq:Os01g0172300