Os01g0172800

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Revision as of 04:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0172800| Description = Embryo-specific 3 family protein| Version = NM_001048690.1 GI:115434793 GeneID:4327118| Length = 822 bp| Definition...")
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Gene Name

Os01g0172800

Description

Embryo-specific 3 family protein

Version

NM_001048690.1 GI:115434793 GeneID:4327118

Length

822 bp

Definition

Oryza sativa Japonica Group Os01g0172800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3734961..3735782

Sequence Coding Region

3735005..3735580

Expression

GEO Profiles:Os01g0172800

Genome Context

<gbrowseImage1> name=NC_008394:3734961..3735782 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3734961..3735782 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcgccgtcgcccaccaccgcagcgccaccaccacctcgtcctgctcgccctcgccgccttctcctgcctcgcctccgggacagcgacgccgacgccgacgacttcctcccaatcccagcagcctcagccagccggcacgctcctccagcccgctctcgccgcggacctcgcggcgcggacgtgctggtacacggtgcagatcaagacgagctgcgcgtcgccgtggcgcacgtcggacgcggtcagcctcgcgttcggggacgcctaccgcaacgaggtctacgcggcgcggctggccggctcctcctcctcgccgcagccgtcgtcgtcggccgcgttcgagcggtgcgccaccgacacgttccgcgtggggggcccctgcggctacggcgtctgctacctctacctccgccgctccggccgcgacggctggacgccgcagtgggtcagggtctacgagcccacctccgacaccccctccaccttctactacggcgaccccctccccaacgccgtctggtacggcttcaaccgctgcccccgcctcgccgcctccgccgcggcgcagtga</cdnaseq>

Protein Sequence

<aaseq>MARRRPPPQRHHHLVLLALAAFSCLASGTATPTPTTSSQSQQPQ PAGTLLQPALAADLAARTCWYTVQIKTSCASPWRTSDAVSLAFGDAYRNEVYAARLAG SSSSPQPSSSAAFERCATDTFRVGGPCGYGVCYLYLRRSGRDGWTPQWVRVYEPTSDT PSTFYYGDPLPNAVWYGFNRCPRLAASAAAQ</aaseq>

Gene Sequence

<dnaseqindica>45..620#acttgtccggtcaactctccagtgacctcgccatctcctcagccatggctcgccgtcgcccaccaccgcagcgccaccaccacctcgtcctgctcgccctcgccgccttctcctgcctcgcctccgggacagcgacgccgacgccgacgacttcctcccaatcccagcagcctcagccagccggcacgctcctccagcccgctctcgccgcggacctcgcggcgcggacgtgctggtacacggtgcagatcaagacgagctgcgcgtcgccgtggcgcacgtcggacgcggtcagcctcgcgttcggggacgcctaccgcaacgaggtctacgcggcgcggctggccggctcctcctcctcgccgcagccgtcgtcgtcggccgcgttcgagcggtgcgccaccgacacgttccgcgtggggggcccctgcggctacggcgtctgctacctctacctccgccgctccggccgcgacggctggacgccgcagtgggtcagggtctacgagcccacctccgacaccccctccaccttctactacggcgaccccctccccaacgccgtctggtacggcttcaaccgctgcccccgcctcgccgcctccgccgcggcgcagtgatggtttgcgacgtcgccggcgagatgagcatgattcgacgacgagcacgtaatttacggttgggttaatggttgcgtgatgtgttacgatgtaatgtatgattcgggttgtgtgtgttgtaaatttgcaataatccagagatttatcttttgagtaattaataagaacagatcagattctgattctgatctgtatgtttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0172800, RefSeq:Os01g0172800