Os01g0174600

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Revision as of 04:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0174600| Description = Zinc finger, CCCH-type domain containing protein| Version = NM_001048700.1 GI:115434813 GeneID:4327128| Length = 135...")
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Gene Name

Os01g0174600

Description

Zinc finger, CCCH-type domain containing protein

Version

NM_001048700.1 GI:115434813 GeneID:4327128

Length

1355 bp

Definition

Oryza sativa Japonica Group Os01g0174600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3829492..3830846

Sequence Coding Region

3829798..3830132,3830276..3830780

Expression

GEO Profiles:Os01g0174600

Genome Context

<gbrowseImage1> name=NC_008394:3829492..3830846 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3829492..3830846 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggaggggtgggatggtggagtgggaggtggggcggcggcgggattcggaggacgtgatcgtgctgtcgccggggccgccggcgaggaggcggccaccgccggtgaaggcggtggagccggagtccggcgggttcgcgtacgagccgccggagaagctgttctacaagacgagggtgtgcgagacgttcgtgaccagcggccggtgcatgttcgaggacggctgcacgttcgcccacggcgacgaggagctccgcccctcgctcaccgcgtgcgccggcggctggaggaagccttcgccgtcgttgtcggcggcggcgcctcccgtggcggtggcgccgacgcctccgccggcgcaggtcgtgcacgagctcctcgccaggggatccggctccggcggcggcggccaccgcgccatcaccaaggtgtgcttcgagttcagggacaagggcatctgctatttcggggagacctgcgccttcccccacgtctccgctgcagagatccgccagggctcaaggctgtcgtcgatgtcgtcgtcgtcgtgggagatgccggcacggaggagcgtggcggtgaccgtgcccaggacgttcgtctccgtgccgccggtggcgccgccgccgccgccgccccactaccgtgtcaacaacagcagcagctacaacgcggcatccatggccgccgcggcgcccgccgccagcgacgccaaccttgtcgcccagcagccgccgccggagcagggaggccggaagatgacccgcctggagatgctcagcctcaagaagatgaccggcatctacggcgactggctcgaggggtatgagcatccataa</cdnaseq>

Protein Sequence

<aaseq>MAGRGGMVEWEVGRRRDSEDVIVLSPGPPARRRPPPVKAVEPES GGFAYEPPEKLFYKTRVCETFVTSGRCMFEDGCTFAHGDEELRPSLTACAGGWRKPSP SLSAAAPPVAVAPTPPPAQVVHELLARGSGSGGGGHRAITKVCFEFRDKGICYFGETC AFPHVSAAEIRQGSRLSSMSSSSWEMPARRSVAVTVPRTFVSVPPVAPPPPPPHYRVN NSSSYNAASMAAAAPAASDANLVAQQPPPEQGGRKMTRLEMLSLKKMTGIYGDWLEGY EHP</aaseq>

Gene Sequence

<dnaseqindica>715..1049#67..571#ctcttcacttggttggcggcggcgctgcgggagctagtagtagatcaagctagggtttggatcgagatggcggggaggggtgggatggtggagtgggaggtggggcggcggcgggattcggaggacgtgatcgtgctgtcgccggggccgccggcgaggaggcggccaccgccggtgaaggcggtggagccggagtccggcgggttcgcgtacgagccgccggagaagctgttctacaagacgagggtgtgcgagacgttcgtgaccagcggccggtgcatgttcgaggacggctgcacgttcgcccacggcgacgaggagctccgcccctcgctcaccgcgtgcgccggcggctggaggaagccttcgccgtcgttgtcggcggcggcgcctcccgtggcggtggcgccgacgcctccgccggcgcaggtcgtgcacgagctcctcgccaggggatccggctccggcggcggcggccaccgcgccatcaccaaggtgtgcttcgagttcagggacaagggcatctgctatttcggggagacctgcgccttcccccacgtctccgctgcaggtaacgctcgctcgcgatcgccatagcttagcttagctaggtcgatcgatcacacgtacgtgcgcgtgcatggccgatctcacgtcgatcgggatctcgcggatcacggctacacctgacccgtcctcacgtgttcgacgcagagatccgccagggctcaaggctgtcgtcgatgtcgtcgtcgtcgtgggagatgccggcacggaggagcgtggcggtgaccgtgcccaggacgttcgtctccgtgccgccggtggcgccgccgccgccgccgccccactaccgtgtcaacaacagcagcagctacaacgcggcatccatggccgccgcggcgcccgccgccagcgacgccaaccttgtcgcccagcagccgccgccggagcagggaggccggaagatgacccgcctggagatgctcagcctcaagaagatgaccggcatctacggcgactggctcgaggggtatgagcatccataaaccaatcgtcgatctctcgctcgccatgattgatcgagctccacctgccaattgccatgccatgcatcgatcgatcgtttcgcgttgctaccttagctcatcgatcgtcgtcaagaaccagaacaattttatatttaatttattttccaaatctgctcccaaaccgaacattgatcttgtcattttaccatccgtgtctgtcggactcatgtctgtatgtgtcttaaactgttgttgaattctgtgcgtgtaagcagacctgcattgccgtcgtgtcgtaagaactggaacaattttatctttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0174600, RefSeq:Os01g0174600