Os01g0175400

From RiceWiki
Revision as of 04:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0175400| Description = Ankyrin repeat containing protein| Version = NM_001048707.1 GI:115434827 GeneID:4326213| Length = 3588 bp| Definiti...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0175400

Description

Ankyrin repeat containing protein

Version

NM_001048707.1 GI:115434827 GeneID:4326213

Length

3588 bp

Definition

Oryza sativa Japonica Group Os01g0175400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3869734..3873321

Sequence Coding Region

3870454..3870477,3871520..3871659,3871992..3872123,3872226..3872396,3873067..3873120
,3873225..3873270

Expression

GEO Profiles:Os01g0175400

Genome Context

<gbrowseImage1> name=NC_008394:3869734..3873321 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3869734..3873321 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgccgttcgtctactgccgccccaccgacgacggcaccagtgagagcgctctcctgagggcggccttcgacgggaacctcggacgcctcaaaggtattttaaagagccttgggatcgagaaaggaaagacccagtatgcagtcttagctcttaacaagcatgggattgggatgctgcacgccgtggcatgccagggccatctgaatgtttgcaagttcttggtggaggaattggggggtgacgtgaatattgctggaaaagaagatataacaccgtttatggccgctgctgagtctggtgatgttcctacggtgcagtattttcttgatcatggtggtgatgtaacaaaagcagatgttagaggatgcacagttctccaccatgctgctggcacaggatgctgtaaggtaacagagttcttgctttcaaaagggatacctgttgacatagactgtggccttggaacaccactctttcatgctgctaacaatggcaaggataagacactgaagattttgttggatcacaaggcagattggctatttgtgacagacatttga</cdnaseq>

Protein Sequence

<aaseq>MAAPFVYCRPTDDGTSESALLRAAFDGNLGRLKGILKSLGIEKG KTQYAVLALNKHGIGMLHAVACQGHLNVCKFLVEELGGDVNIAGKEDITPFMAAAESG DVPTVQYFLDHGGDVTKADVRGCTVLHHAAGTGCCKVTEFLLSKGIPVDIDCGLGTPL FHAANNGKDKTLKILLDHKADWLFVTDI</aaseq>

Gene Sequence

<dnaseqindica>2845..2868#1663..1802#1199..1330#926..1096#202..255#52..97#actccgctcctcgtcctcctcctcctgcaagcttcctccctcctcgcggccatggcggcgccgttcgtctactgccgccccaccgacgacggcaccagttcgtccagcctccccccacctctccgcatctcctcctagctcgatcggcttgctagctcctcggccatgtggtctaatggcgatttctcggtttgttcgcaggtgagagcgctctcctgagggcggccttcgacgggaacctcggacgcctcaaaggtaggtttgcttcctctcctcctcctcctcctcctcctctccttcttctccgccgcgtcgatcccccccgatcgatgcgtgtatgcattgccccccctttgcatgcgcctgtgttgcgtgcttttcctcccttaggtttgggtgatgcatgtgtgtccttgtgtggagcgcttggcgatggctgtactgttaattgatttggccatggaattttggaatgcaaattctgtatctagcactcgttgcctttgggaatttcccacaatttattttcggtaatgtttatatgttgcatggatttttgaccctgcgtgaaggaattaacagccaggtctatggattactggagatgcatgccatcttatctagaaattgcaagatctgaggcttttatcgtagcaagtccttgcgttggataaatgcgacaacgttgtgatcatctttctattacagttacctctccaagtgctaatgtgtgatgagtagcaggtagtactctacaaaaatgtttttcaagtcgcaagtatgaagtataggttcacatgactcagtgaggttcttgcacgttgcacgtattcgtcgctttttcgagttctacctagttaatctgttcattcgcagattatcttcctcactgtgatgacttctttttgttcttatttgcgagaaggtattttaaagagccttgggatcgagaaaggaaagacccagtatgcagtcttagctcttaacaagcatgggattgggatgctgcacgccgtggcatgccagggccatctgaatgtttgcaagttcttggtggaggaattggggggtgacgtgaatattgctggaaaagaaggttattatctaactctaccatcctttcatgaaattggcggctgccatgtctatgttttggcagtataatgtgccaagtgtactgatgtgctgtttattacagatataacaccgtttatggccgctgctgagtctggtgatgttcctacggtgcagtattttcttgatcatggtggtgatgtaacaaaagcagatgttagaggatgcacagttctccaccatgctgctggcacaggtctcccttgatatgaacactatccaattccttgttatattaccaattatattgttgtacaagattctacgatactgcattactattaatagattacatttaattcaaccatgtcgtcacagttatcttttattgtgttgctaatctagatacttttagtttatatatcaccactcaaagttgtataggtttgctctgtttatactcggtcacatctcacatgtaatctattgtgatttgtccattatactggtactaactgtttattcaaataactcaatttatatagtatttgtttccccatgatttatggcccatctcattcactgcaggatgctgtaaggtaacagagttcttgctttcaaaagggatacctgttgacatagactgtggccttggaacaccactctttcatgctgctaacaatggcaaggataagacactgaagattttgttggatcacaaggcagatgtatgtagttgccactatttcttatttcctcttcctttttctcactgctagtttggatagatagatatttgttttgctttccacttagatagttagcttattagctgatgtacactgatgcagtggcggagccaggataaaattatagtgggggctcctcagacttttgggccttctaacaatctcagataaagtctattttagccccctttaatagatatatggatttaaattttagggggggtcttaatgggggctctaatgatctattagggggtagggggtctatagaccccccagcccccacgctgtctccgccactgcactgatgcgtgtttgcatgggactgttctgtttgcttggattgacccattctcagatattgcagtgcataatctatccttttggtttttactttgacattttatagaggatcttagatcatatggatttccaggtcttaaaaaggattatttcttttcttttttttggttatgaaatgaattattgtgatgagagttaggataccacgcgtagcacacgctactgaggcccctgatcgacgcggccacaccgcgtacatagcatcttccacctgcattgtgattattattataccgctgacctttgagtaatactcctaagtcctaaaattgccatttggcatgctctaaataaggttggctgatgtttttttgggaaagagcatgggagtttaggtgttcaattcatggcacttatataagctattatcctgctcttttatctactcatctctttaatgattgaaatgctttaggatcatcactagaaaaaaacacgcggcaaagccgcgtgcaatactggatgggccatgctatttgaccctaatgagacagaataatcagtttaacaacaatgcaagtattatctaaaaaaaaaagcgcaagttatagcatgatactacagtgcacaatcatgattgctgtagtagactacaaaatttaaaagatttttgtgacatatagtgtgatatagactgtataatctgaacaaaacacagtggctatttgtgacagacatttgaagagtattgacatattatcttcaacaacgggagacgacgacaggattctcgagaacccggccgacgtcctcgtaatcgtttgccggaaccaagcaacccatcgtcatcgtcatcatcctctagatgttgatctagagcttaaataatgaaagattttaataaagctccatgtcaactttgtattagagtaactggctagtagatcagtctaggttcttagtcagagctagatacaccaaaagtaatttggctagtagatgagaggataacaaaagtgtccatcttggactatagatagcaaaagtaggctgtcttgattggagaagttatcaggtagaacgcttctttttgccctttgtctgaatgaagccatagtcagtgctttcttcttcatcattttcctaaaaaagaaaaacagaatccttatcaaagtatattactaaggaaccagcaattctttctcatgcaatacttagcacaatgcaggcagtaggtttggcaagtatgagacccctagtgtcagccatatatgtgaatagtacatgtaaatagagaatagttgttgaccacagggtatacacttgcttgaatatttcattccattatctaaaaaaatacacttgattgaaatggtgccaagcttgtgcacagtacagttagtaggttaattgtatgattgaagaatgaaaaacaaatgaatttaaatatgatcagttgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0175400, RefSeq:Os01g0175400