Os01g0179300

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Revision as of 04:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0179300| Description = Conserved hypothetical protein| Version = NM_001048733.1 GI:115434879 GeneID:4323877| Length = 2796 bp| Definition ...")
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Gene Name

Os01g0179300

Description

Conserved hypothetical protein

Version

NM_001048733.1 GI:115434879 GeneID:4323877

Length

2796 bp

Definition

Oryza sativa Japonica Group Os01g0179300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4122420..4125215

Sequence Coding Region

4122751..4123140,4124226..4124484,4124639..4124985

Expression

GEO Profiles:Os01g0179300

Genome Context

<gbrowseImage1> name=NC_008394:4122420..4125215 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4122420..4125215 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgggaggagggaggaggggcgccgcggcggaggaggtgaagctcagcaccggcaacgtgttcgccgcgctcgagacgctcaagaagaagaagaagggcggggacaaggccaagggcggctcgtcgtcgtcgtcggggaggaagagggagcagcagggggcgcagccgtcgtctcagcagcagcagcagcagcagaaggaggtcttctgggcgcccgcgcccctcaccaccaagtcctgggccgacgtcgaggacgacgacgacgacgactacttcgccaccaccgctccccctcgccccgtctggggcaccggccatggcgacgatggggccaaggaggaggatgaggaggacgacgacgatgccgtccacgccgcccttcaggaggaagtagagagtgaagatgaggacctcgatgatgaggttgatgatggtgctgtggatgaacctgagcatgaagtggatgatacctctgctgaacctgctggtaagaaagctgcagttcctgttgcaccgcctaaagatacggagaggcagctgtccaaaaaggagttgaaaaagaaggagctagccgaacttgatgctgttctggctgagttgggaatttctggtggttcaagcaatgctgcacaggatgaaaacaatgctgagaagaaaggttcaaaccaaactggtgatggagatgcaccagcaccttcagagagcaagagttccaagaagaagaaaaacaagaaagcaaaggaggctaaagaatcacaagaaccagctgatgggacagaggagactgccagtgcagaacctgatgaagacacaacctctgttgatgtgaaggagcgcttaaagaagatggcttcaatgaagaaaaagaaatcaggcaaagagtcagacacagctgcaaaaattgcagctgctgaggctgcagcaaggagcgctaggctcgcggcagccaagaagaaagagaagaaccattacaaccagcaacctgtgcggtaa</cdnaseq>

Protein Sequence

<aaseq>MVGGGRRGAAAEEVKLSTGNVFAALETLKKKKKGGDKAKGGSSS SSGRKREQQGAQPSSQQQQQQQKEVFWAPAPLTTKSWADVEDDDDDDYFATTAPPRPV WGTGHGDDGAKEEDEEDDDDAVHAALQEEVESEDEDLDDEVDDGAVDEPEHEVDDTSA EPAGKKAAVPVAPPKDTERQLSKKELKKKELAELDAVLAELGISGGSSNAAQDENNAE KKGSNQTGDGDAPAPSESKSSKKKKNKKAKEAKESQEPADGTEETASAEPDEDTTSVD VKERLKKMASMKKKKSGKESDTAAKIAAAEAAARSARLAAAKKKEKNHYNQQPVR</aaseq>

Gene Sequence

<dnaseqindica>332..721#1807..2065#2220..2566#tgtgtgtgcagataacccaactcgcccaacccgggagagctctcccctccctctcctcctcttctctctctcactaaacaaaccacacgcaacgcaagcacgcggcggcggcgtctcctctccacgaaaaccctagcccgcgccgcatccccaacctcctcctcctcctccccgccgccgccgcccgatcgccgcgtcctccgctccgcaccctcccccgcagatcggcggcggcctgtgcccgcgggggtcgcgcggggcccgcgtgtttcccagattcagatttccccggcggtgagcggattcgggaggttttttaggggggttgattatggtgggaggagggaggaggggcgccgcggcggaggaggtgaagctcagcaccggcaacgtgttcgccgcgctcgagacgctcaagaagaagaagaagggcggggacaaggccaagggcggctcgtcgtcgtcgtcggggaggaagagggagcagcagggggcgcagccgtcgtctcagcagcagcagcagcagcagaaggaggtcttctgggcgcccgcgcccctcaccaccaagtcctgggccgacgtcgaggacgacgacgacgacgactacttcgccaccaccgctccccctcgccccgtctggggcaccggccatggcgacgatggggccaaggaggaggatgaggaggacgacgacgatgccgtccacgccgcccttcaggaggtttatttatctctcctccatgtaccatgcctatttgtctgtgatgtgcatggatttttttttgtttcgcttgattacatgtgctgttctgctgcgcaacgttttgattatagttggaataatagatttcgcactcgtgtagcgcgaggaattgctggattgaggtaggaggatattatgtaggctgtaatggtagtggtgatgtctgcaagattagtttttggaattgcgaaacacatgctcggtgataatttggatttatatgtaggtatattgaaaccgtagcatgaggttagaatgcgttagttatacttgtgcatgcattattagtttttacaaactacgaatgcatccgtatgaaacggtaagaggagacaagggaatatctcaggtgtatttatttctgcatggttagttttcaaaacaggctttagataccgaactggtaaattggaatgtttgtatcgtatttgttactacgttattaattttgtccgttggcaaaacaatttccttttgtcacacagtgcaatatttgatgaataacctaacatcacaggtggagtcattattgattacttgatatgatatcatgtctgctatgcttatttatatttattaggactgtttctttcaatgatgtgattttattttatttatactgtggattgttttgtccaacgacgtgattttgtttgtctgacagcatatgctgagctgataaattgacaaggagttactttttgcactatatcactgaattgacacagcaaataagaacacactattttggctgctaatatactggttacctatcgaacaagaatacgatgtataatttttcatgaataattataaaaaacagtatgtttttaaatttcttttcctcccataagtatgtaattctttatgattagattttaggggcacataattggtgccaaaaaaaacatgtgaacaaataattgactgatgttgaatacaatataaagctcaacagaaactgtgggtgctgcattttcactgttgcctctttatgcttgattggtggaattcttatttgtgtttgcctctatgcactgcaggaagtagagagtgaagatgaggacctcgatgatgaggttgatgatggtgctgtggatgaacctgagcatgaagtggatgatacctctgctgaacctgctggtaagaaagctgcagttcctgttgcaccgcctaaagatacggagaggcagctgtccaaaaaggagttgaaaaagaaggagctagccgaacttgatgctgttctggctgagttgggaatttctggtggttcaagcaatgctgcacaggatgaaaacaatggtaagtgctactgtataccctgtttgtttagtttgctttctttatgatgctgaaattgtacttgatggttttttgtgtgttcctcagcatgtgtctctctatggttggttgtctttatggaatttatttgttcatgtgctttgttttcttgcagctgagaagaaaggttcaaaccaaactggtgatggagatgcaccagcaccttcagagagcaagagttccaagaagaagaaaaacaagaaagcaaaggaggctaaagaatcacaagaaccagctgatgggacagaggagactgccagtgcagaacctgatgaagacacaacctctgttgatgtgaaggagcgcttaaagaagatggcttcaatgaagaaaaagaaatcaggcaaagagtcagacacagctgcaaaaattgcagctgctgaggctgcagcaaggagcgctaggctcgcggcagccaagaagaaagagaagaaccattacaaccagcaacctgtgcggtaaatggccgccaaagttttgaaaaatgttctgagtttgaaaaatccccttgttcgtttttggactcacaataaacttttttgagttgtatttatgacctttgagcgcctttctgagattcatttcgaattcttgaaggcctttctggtctcaaaacggtcatgtaattgtgttttgaattgttgacccggtggaacttaatggacggcatggccagtgggggctaattgggt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0179300, RefSeq:Os01g0179300