Os01g0180700

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Revision as of 04:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0180700| Description = Conserved hypothetical protein| Version = NM_001048744.2 GI:297596219 GeneID:4325354| Length = 4431 bp| Definition ...")
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Gene Name

Os01g0180700

Description

Conserved hypothetical protein

Version

NM_001048744.2 GI:297596219 GeneID:4325354

Length

4431 bp

Definition

Oryza sativa Japonica Group Os01g0180700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4244421..4248851

Sequence Coding Region

4244714..4245388

Expression

GEO Profiles:Os01g0180700

Genome Context

<gbrowseImage1> name=NC_008394:4244421..4248851 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4244421..4248851 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcttttaggaattgttgctcaagtaatccaaatgcaaaatcattcttcttgaaaagaattcacgtgcttgaatgcaggaaatcaaaagaatctgatccacaggaggcaggcaaaaaagagaagcgtgcctcacatcagggcaataaaggagccaatggagggtctgacattggtccagagcagaaggaagatggacaggaggatgctggagggtctgacgtcaatccggagcaggacaaagatggcggacaggaggatgtcgagtcccttgatgacctgagttctgatgaggatgaagacagagactacaatggtaaggatgatgactcgtcaggcagcgatggagaaaatgatgttggcagtgatggagaaaatgatgcttatgatcccaacaagggtgatactgaagaggaggaagtatttgtcccacgtaagaggactcgtcttgcctcccgtcggtttgacaagcctccgcaagggctccgccggagtcggagaaatatgaaaaacgacgaagacgtcatgcgcccaggacagcttactcctcgatccatgacaaagaaaacaatgaggcagaggccaacatctatctcaaagcagttttctctatcaggctcggaagatgatcgtgaaatgatagttgcagactctgaggaggagtccggctcaccttag</cdnaseq>

Protein Sequence

<aaseq>AFRNCCSSNPNAKSFFLKRIHVLECRKSKESDPQEAGKKEKRAS HQGNKGANGGSDIGPEQKEDGQEDAGGSDVNPEQDKDGGQEDVESLDDLSSDEDEDRD YNGKDDDSSGSDGENDVGSDGENDAYDPNKGDTEEEEVFVPRKRTRLASRRFDKPPQG LRRSRRNMKNDEDVMRPGQLTPRSMTKKTMRQRPTSISKQFSLSGSEDDREMIVADSE EESGSP</aaseq>

Gene Sequence

<dnaseqindica>3464..4138#gtctcctcctcctcccccgcctctccactttcctcccctccctcccgcctcccaccaccaaaatttcccccactttcccgcctgtctcctccagtccccgcacgatggcctcgccggcgaagcgcgcgaggcccccggcctcgtccccggtggacccccccgcgtcgccgccggcgccggaggacccctgcgtcctcctccgccgcagctgggagctcgcgtcggtgctccactttctccgggtgagccgtttcggctagggcttcctttttttttctttttcttttttttttgtccctctcctgcttcaagggttgggttggattggtattggcgtgttgggcttacggggtttcggtttggggattttttttggttttcaggtgtttgagccggtgatcgaggggaacctggggctatcagcggaggagatcgagaccgcgctcatcgccaataaccacgaccttgcccgcatccatattgcgcttataaaggtgtagtttgttttttcaggctgcacctatgcactcctgacttctgtagttatggttggatcgtgtaggctttggattgcagaatgcctgcattgtagacagtttggtgatctgatttgtttaaggcagcagatactctgcctgtaggtttgttcgtgcttgctttgcactagaggcattgtgtatctgcagggagggtttgaactgaatacacacttgcgttggtctatgtaatctttaaccttgtcacaaaccatgacaggttttctgcaaaaagggaaaaaacttcatttctttgtccttgtcctttttgtttgcaatcaccgagtaagttgcaggttatgtaatcagctaggcttgtcaaaaaccataacctgtttctccatagttatcttttaaaaaactttatctatatgtaattctctttttttttcttttgaaagtactgaataagttcaatcaatcattttttaatcttgttaaaaaacagtgacatagtgactgattaacttcattaactgttatggacatgcctgtttgagatttctaaatcacgtgacatacaaataaaacaagcttgcatcatctgcgttgctgtgggaggcatctttccttattgagctattgtgtactagtaacaagatgtttgcatcagttattcttatactgcattactaccctgtattagggagaccaaatattatgataccttttcttttctctaagtttcatttttttttgttgttgatgtaatgacgaataagcctgtttatgttactgttttgccatgtttgtctgaaatgatgtttgctaagttgtaatagtcacgtgtatcagggaataccaccaactatcaaaaatctgaaggtcgatgatggatggataacggcaactgccaagaaattatcagattggtggacatgggtatgttttagtttgcataaaatttttactagtgtaaatataactagagcagtcccagacattaacatcattttggtttcaggttgctgaaggtgcaaacccgttcaaaattaatccagggtatgcaggataatgcattgtaaataagctttttgactatgactcttaggtaacttcatatcgcgacttatttgtttacccaggaaggaaattgacacgtataaacagcaagatccgattaaacgcttgttgatacttaaagcactctgtgaagttcgttcagaggtaacgattctatgagttcaccttgttgtaattgcagtttcctttcaggtttaataatctaattagtcaaatacccccaagtccttcagcttttaaatgcacattattctgatagacattatctatcctgcagcaaaatgacgcggtatggtatgttaatgacgagatgaaaagaggagttgatatttccaatttccgaaaagaaaagttaggaagtagtagtaacggaactatatactggtaagagagtttctgttcactttcatgttatcatttgcaatcaatgagtcactgttagcatgcctttgcgtcctctttttttcctgctgacactgtccattgaaatatttctgcttgttaggtatgatggtgactcaactattggccatagattgtatagtgagtatgtaacacttgatttcaagcgcaacttgaagggaaagaatggtcgtttgacaaagccagttatcaatattcagtgggaaacagttgcgactaaccttgatgagttcgttgagatatcggtaagtgtattggctgttcattttcttgtgcagcttgtgttttgttcccatatttgacatatggtatcaacaggagaaactatgcagtaaaggtcgaccggaatctgccatcggcgagcatcttaagacagaaattattccagatgtggagaagcttcaaaaggtagctttcagctcacgtgctttctactctgttgcgtctatatttccccaggggtgtccaatacatgaatgcatttatattctactttggaatcaggatttatgcttggcagcaagatatgaagctcatactctacttttatgatttatgaccacatttttgtctgtttaatttgcagaagaaggagcgggatttaaaacgtcagcagaagaaggatgaacttttagcttatgctacaagtttccaaacccgttcattgcgtgaacgtaggcctgtcagctacaattactgtaaggggctttctgtttagcatccttgagtacacaaggtgcatgacaacttgagactgttcatcatattttacgaatagtagtctggatgcataaccaacagcttgctgggtacattgaatttcatgttgcatctctcatttcttctgccagtccctcatttagtagaagtgtagatactttacccatttaccgtttccaatccatataactgtaagcctagtggaaaatgatgattgttgacagctctcactaataacacaagctctaagaattgcagcaaatgctataggttaatacagatgttttcagcattcaacaggctcatattctaattctatttttaaatactcagtaaaactgatcaaagtatttatgttttgtgaccaattgctatgtcttggcattgatacccttgatttgctttgtgtgcagctgattacgatcgttctataaaggaggcaataaaagctgcagcgtaagttaaaaccattctttcccttcctgttttccccctagttcgttggcagttaacatttggaacactgcaacaatataagcaattaaataccttcgatttcttgtggtacagcatagtccctcattactaacattagcagcatctgatagtataagcaaattagaaggagagggggggggggggataactggtaacaggtttgagacttgttggttccaggaattgacatgtcagatttactagaatttagaaacagcaaacttgaagtatggatcacattctccatgcttatttagcactgagcttttaggaattgttgctcaagtaatccaaatgcaaaatcattcttcttgaaaagaattcacgtgcttgaatgcaggaaatcaaaagaatctgatccacaggaggcaggcaaaaaagagaagcgtgcctcacatcagggcaataaaggagccaatggagggtctgacattggtccagagcagaaggaagatggacaggaggatgctggagggtctgacgtcaatccggagcaggacaaagatggcggacaggaggatgtcgagtcccttgatgacctgagttctgatgaggatgaagacagagactacaatggtaaggatgatgactcgtcaggcagcgatggagaaaatgatgttggcagtgatggagaaaatgatgcttatgatcccaacaagggtgatactgaagaggaggaagtatttgtcccacgtaagaggactcgtcttgcctcccgtcggtttgacaagcctccgcaagggctccgccggagtcggagaaatatgaaaaacgacgaagacgtcatgcgcccaggacagcttactcctcgatccatgacaaagaaaacaatgaggcagaggccaacatctatctcaaagcagttttctctatcaggctcggaagatgatcgtgaaatgatagttgcagactctgaggaggagtccggctcaccttagataaacttatgcccccttttgcattttgtttgttggaagcttgtgaattcagtagttcagtcctctcaccagcttccaattgtatcaggtaggggaaagcaggcagcaccagccactacttaccacccagttgctgtggtgattgtacatatgcgtcaactgcgcgcgtcaccacttaggtctagtttatgagaacttctgtttatcacgatgtcgctgcttgctgtgaaatattttgtgcctgtactttgggcgttggagggagttgaatttctgctgtttttgatggtgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0180700, RefSeq:Os01g0180700