Os01g0180800

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Revision as of 04:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0180800| Description = Heat shock protein Hsp70 family protein| Version = NM_001048745.1 GI:115434903 GeneID:4325355| Length = 5737 bp| De...")
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Gene Name

Os01g0180800

Description

Heat shock protein Hsp70 family protein

Version

NM_001048745.1 GI:115434903 GeneID:4325355

Length

5737 bp

Definition

Oryza sativa Japonica Group Os01g0180800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4252845..4258581

Sequence Coding Region

4253484..4254653,4255526..4255735,4255842..4255937,4256034..4256255,4256829..4257023
,4257097..4257243,4257323..4257472,4257762..4257892,4257978..4258194

Expression

GEO Profiles:Os01g0180800

Genome Context

<gbrowseImage1> name=NC_008394:4252845..4258581 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4252845..4258581 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggcagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtctgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaacccgaagaattctgtttctcagatcaagcggctcctcgggcgcaagtactctgatcctgagctccagcgtgatattgcggccttccccttccgtgtctcggaagggcctgatggatttcctcttgttcatgcccgttaccttggtgaagagcgggttttcactccgacgcagctcatggctatggtgctttctaatctgaagggtattgcagagagcaacctgaatactgctgttgttgactgctgcataggcattccggtgtacttcacagaccttcagcgcagagctgtgcttgatgctgccaccattgccggcctctgcccattgcggttgtttcatgagaccaccgcaacagcattggcatatggtatttacaagactgatcttccagagaatgatcaattaaatgttgcctttgtggatgttggacatgccagcatgcaagtctgcattgctggttacaagaagggacaactcaagatcttgtcgcatgcatatgaccggtcccttggtgggagggacttcgatgaagtcctgtttaagcactttgcagcgaaattcaaggatgagtacaagatagatgtttaccagaatgctcgtgcctgcattaggctccgtgtggcttgtgagaagctcaagaaggtgctgagtgctaaccctgagtcaccaatgcacattgaatgcttgatggatgagaaggatgtgagaggttttatcaagagggaagagtttgagaagattagtgcatcaatactggaacgtgttaaggggccactggagaaggctttagcagaagctggtttaacgacagagaatgtccattttgttgaagttgttggttcaggttctcgtgtcccggcaataattaagatactcacagatttctttgggaaagaaccaaggaggacaatgaatgcgagtgaatgtgttgccaggggatgtgcgctggagtgtgctatccttagtcccacttttaaagtgcgagagtttcaggttaatgatggtttccctttctcaattgcaatgtcatggaaaccagactctcagaatggtgataaccaacagactgttgtattccccaagggtaacccattgcccagcgttaaagcattgaccttctataggtccaatacatttcaagtagatgtcacgtatgttgatactggtgatttgcaaatatcaccaaagatcagcacttacacggttggtcctttcaatcccggcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaacatccatggggtggtcacagttgaatcagcaacaatgttggaggaggaggaagtggaagttccagtagcagctacaactgagcctccgaaagattctgccaagatggagacagatgatgcacctaatgaagctgcttctggaactgatgtaaacatgcaggaagccaaagcccctgcagatgctgctgccgatggtgctgaaaatggcgcaccaaattctgaggaaaaatcagtccctatggaaactgatgccaaggttgagccatcaaagaagaaagtaaagaaaactaatgttccagttgctgagttggtttatggtgccttggggactacagagttgcagaaggctgtggaaaaagagtatgaaatggctcttcaggacagggtgatggaagagacaaaagataagaagaatgccgtggagtcttatgtttatgacatgcgaaacaagctgtatgacaagtacaatgattttgtgactgctgaagacaaggaagcattcattgctaagcttcaagaggttgaggattggttgtacgaagatggtgaggatgagaccaaaggagtgtatgttgctaagcttgaagaacttaaaaaggtggggggtcccattgaggcaaggtacaaggaatggatggacagaggcccttccatcgaccaacttgcttactgtatcaacagtttcagagatgctgccttgtccaaagatccgaagtttgatcacattgagatggaggagaaacagaaggtgattaaccagtgttccgaagcagaagtctggctgagagagaaaatacagcagcaagatgctctgccgaagcatgctaaccctgtcctactctcttctgatttaaagaaaaaggccgaaacggttgacaggttctgcaaaccgataatgatgaagccgaaaccagctcctaagccacagacgcccccacaaacgccaccgaccgagaccccggctggcggagcccaaacaccagagcagcaacctcagggagctgaagcggctggcgaggccagcgagggcggcgccagcgaatctaccggcgagcaaatggagacggacaaaccggagggaactgaagctgcctag</cdnaseq>

Protein Sequence

<aaseq>MSVVGFDLGNESCIVAVARQRGIDVVLNEESKRETPAIVCFGDK QRFIGTAGAASSTMNPKNSVSQIKRLLGRKYSDPELQRDIAAFPFRVSEGPDGFPLVH ARYLGEERVFTPTQLMAMVLSNLKGIAESNLNTAVVDCCIGIPVYFTDLQRRAVLDAA TIAGLCPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGYKKGQL KILSHAYDRSLGGRDFDEVLFKHFAAKFKDEYKIDVYQNARACIRLRVACEKLKKVLS ANPESPMHIECLMDEKDVRGFIKREEFEKISASILERVKGPLEKALAEAGLTTENVHF VEVVGSGSRVPAIIKILTDFFGKEPRRTMNASECVARGCALECAILSPTFKVREFQVN DGFPFSIAMSWKPDSQNGDNQQTVVFPKGNPLPSVKALTFYRSNTFQVDVTYVDTGDL QISPKISTYTVGPFNPGKGDKAKLKVKVRLNIHGVVTVESATMLEEEEVEVPVAATTE PPKDSAKMETDDAPNEAASGTDVNMQEAKAPADAAADGAENGAPNSEEKSVPMETDAK VEPSKKKVKKTNVPVAELVYGALGTTELQKAVEKEYEMALQDRVMEETKDKKNAVESY VYDMRNKLYDKYNDFVTAEDKEAFIAKLQEVEDWLYEDGEDETKGVYVAKLEELKKVG GPIEARYKEWMDRGPSIDQLAYCINSFRDAALSKDPKFDHIEMEEKQKVINQCSEAEV WLREKIQQQDALPKHANPVLLSSDLKKKAETVDRFCKPIMMKPKPAPKPQTPPQTPPT ETPAGGAQTPEQQPQGAEAAGEASEGGASESTGEQMETDKPEGTEAA</aaseq>

Gene Sequence

<dnaseqindica>640..1809#2682..2891#2998..3093#3190..3411#3985..4179#4253..4399#4479..4628#4918..5048#5134..5350#ccccaccaccacagccgcctctcatatatcaagcggccgcccacgcgcccctcgcatctttcgcgaaggcgattcaggcgagaagagagagagagagcgcgaggccggcggttctagaagcttccagacccttcggcgcgagcgagctcacctcccccgtaggtacggcccacccttctcttcccaggtcgcgccgcgagttggatccgcgccaccgcccgcccgtggatctgatcgtgtttcggcgatttgttcgttgcgtttttgattttattttatttttttctggggtctcagcctggggggatggtttgcgctgctcgggtttcagccgcggagggatgatgtttttcgttgttattttttttttcgcggtagctgcgcgggattttgactcgctagggttttagatcggtcgtggtgcttagagtaatctcaaatccttgaattgttacaaatttttatttttgcagctctgcagatcgagatttatgtgattttagtgttgatgtttaggtggttataggtttggatcctgctgtgagtaactcgtagatcctgatcctgattgattgtatttatgtgcgcaggagctgttcattagatctgaataagggggattgaagcagtgaggagaagatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggcagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtctgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaacccgaagaattctgtttctcagatcaagcggctcctcgggcgcaagtactctgatcctgagctccagcgtgatattgcggccttccccttccgtgtctcggaagggcctgatggatttcctcttgttcatgcccgttaccttggtgaagagcgggttttcactccgacgcagctcatggctatggtgctttctaatctgaagggtattgcagagagcaacctgaatactgctgttgttgactgctgcataggcattccggtgtacttcacagaccttcagcgcagagctgtgcttgatgctgccaccattgccggcctctgcccattgcggttgtttcatgagaccaccgcaacagcattggcatatggtatttacaagactgatcttccagagaatgatcaattaaatgttgcctttgtggatgttggacatgccagcatgcaagtctgcattgctggttacaagaagggacaactcaagatcttgtcgcatgcatatgaccggtcccttggtgggagggacttcgatgaagtcctgtttaagcactttgcagcgaaattcaaggatgagtacaagatagatgtttaccagaatgctcgtgcctgcattaggctccgtgtggcttgtgagaagctcaagaaggtgctgagtgctaaccctgagtcaccaatgcacattgaatgcttgatggatgagaaggatgtgagaggttttatcaagagggaagagtttgagaagattagtgcatcaatactggaacgtgttaaggggccactggagaaggctttagcagaagctggtttaacgacagagaatgtccattttgttgaagttgttggttcaggttctcgtgtcccggcaataattaagatactcacagatttctttgggaaagaaccaaggaggacaatgaatgcgagtgaatgtgttgccaggggatgtgcgctggagtgtgctatccttagtcccacttttaaagtgcgagagtttcaggtatgtgcccgctttcaccctgctgccttctctgctttggctatctgcacaatacattaatagaaatcttgctgcttcatgccttaaaatctctaattaaggattgtttaagacgctcatcctcatgtgcaccgtcattaaagtttaattggatagtccaataagatttgtctccttacatgactccattaagatcatgcaaccatcaccaatagttattcatagtgtcgtaattttcatgacaattttatccggtactccaatgaaactgtttccttaatatcatgcaacctctagttataaccaataggtttatgcagaatgttcgtcataattttcataacaacttagcgtgatacttaacatgactcaaatatcatgcaacctctattcatgagttttgtgaccaatatggcttattatgcagaatgttggtcataattttcgttgtaatttaatctcatactccaataagattgtttctaacatgacttcattaagatcgtgcgaactcgcttatgcagagtttgtcttgttggctccttgaatctgggtttacccaccaatttaattcttgcctaataacattgctggaatctataaagctttcagcatattcttactgtttaaggataacatatgcactgaaggcctgatttgaatgagtagtatttggttcaaaaatctatttcactcccttgaagtcttaaaattaaaacaaatcttagtatactactactcaaaatcattttaggataacactaacactaggatttttttctttcgtgagtttacaataaatcatcctagttcttgcttgtacaacactaaagtatgttttttccccagctataacgctaaaccctgtgcaggttaatgatggtttccctttctcaattgcaatgtcatggaaaccagactctcagaatggtgataaccaacagactgttgtattccccaagggtaacccattgcccagcgttaaagcattgaccttctataggtccaatacatttcaagtagatgtcacgtatgttgatactggtgatttgcaaatatcaccaaagatcagcacttacacggtaactgacttaatatttccttttttatgttctcgaatgtgcttcgagtccaactatcgtgtattgatcatgttcttttgttgtgtgtgtttatgttaatgtataggttggtcctttcaatcccggcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaacatccatggggtggtcacagttgaatcagcaacagtgagtgataatgcaggctgttttttttttgtagttcttttcctaaatgattttcgttgaaataaatctgagagtatttctattggtctggtgcagatgttggaggaggaggaagtggaagttccagtagcagctacaactgagcctccgaaagattctgccaagatggagacagatgatgcacctaatgaagctgcttctggaactgatgtaaacatgcaggaagccaaagcccctgcagatgctgctgccgatggtgctgaaaatggcgcaccaaattctgaggaaaaatcagtccctatggaaactgatgccaaggtaaattttcattactgacaaaatcttgaattatcatgctagcaggtgcctgaagccttttaatttgaaaccttttgctttttgaagtatcatcagtacaaggtggaagttgaggaaacagtattctggacatgttttttattcagagctaacatatcttgcctttgtagtttatatttatagataaccttttgaagcttacatgcgcaagctgatctgattagtccactgcactgttatgccttcgatttgacactttccttgcattgattttatcacgactttttccatgccaaccacaatgtgccagtgtgcaacaaattcgttgcaattgctgtttttgtggtagttatctatcattctattgctgaaactatacttgatacaaatatgatcattctttactggatccttcctactgtggttcaaaatttggttttatcttttcctcaattcctcagtctgtttcagtttgccctaaagggacaagtgaattgatgaaatgcgatgaaggaaaaagtaaactgtatcagatgaactaacagttggcacattttgatgaaaaaactgcaggttgagccatcaaagaagaaagtaaagaaaactaatgttccagttgctgagttggtttatggtgccttggggactacagagttgcagaaggctgtggaaaaagagtatgaaatggctcttcaggacagggtgatggaagagacaaaagataagaagaatgccgtggagtcttatgtttatgacatgcgaaacaaggtttgatcgattccactctttcctgacttcatctttagttagaggcagaaactgataatatgttatttttcagctgtatgacaagtacaatgattttgtgactgctgaagacaaggaagcattcattgctaagcttcaagaggttgaggattggttgtacgaagatggtgaggatgagaccaaaggagtgtatgttgctaagcttgaagaacttaaaaaggtttgtctctttcatttattttgctccttacatcttgttagtttgtatattaaaaaaaagctatgatttttggtcacaggtggggggtcccattgaggcaaggtacaaggaatggatggacagaggcccttccatcgaccaacttgcttactgtatcaacagtttcagagatgctgccttgtccaaagatccgaagtttgatcacattgagatggaggagaaacagaaggtattcaatgcatcaactacaaaattagcacaatatcttttctctatacactgattgcaatgctagttcacgaactacgttctgctagtgaatggtaacagaaataaaatccttttattagggttacaaagtaattgacatacgccctgcttggccctacattggattatagcaattttgaatgaattgtaaagcttgatttttcagaataattttagatagacttttcactcgtcttagttgatcccaccgatagacggtattaaattcatttgcttgtcacatgcaggtgattaaccagtgttccgaagcagaagtctggctgagagagaaaatacagcagcaagatgctctgccgaagcatgctaaccctgtcctactctcttctgatttaaagaaaaaggccgaaacggttgacaggtccgtagataaatctctcttgacgccacttgctgttcctgtatcctatgtttaagcatacttctaacgcccattctttttacaggttctgcaaaccgataatgatgaagccgaaaccagctcctaagccacagacgcccccacaaacgccaccgaccgagaccccggctggcggagcccaaacaccagagcagcaacctcagggagctgaagcggctggcgaggccagcgagggcggcgccagcgaatctaccggcgagcaaatggagacggacaaaccggagggaactgaagctgcctaggctgcagctgcggaaacgtttttcagtttcctgcaagttgctgctgctcggtctgcattcgttatcagattccgacaccgaagttcagtagaggttcgctagggatggatttgtgattcaccatacttcgtgaggatcatctgcgtgaacgtacgtttaggtttatatcctactgtaccaatgtgttgttaaaatcggctttccctttttaatttttctgccaaggggttttctttcaattcgagatataagggcacgtttcagatttggtgtcctacggggtgggtgttatagcgggacttacaatggaactcaaatttttaagtccgatgtatcaactgattcttgttccatgggatttgcacgctcttctggacttacttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0180800, RefSeq:Os01g0180800