Os10g0467900

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Revision as of 08:41, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0467900| Description = Protein kinase-like domain containing protein| Version = NM_001071347.2 GI:297610620 GeneID:4348854| Length = 6158 b...")
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Gene Name

Os10g0467900

Description

Protein kinase-like domain containing protein

Version

NM_001071347.2 GI:297610620 GeneID:4348854

Length

6158 bp

Definition

Oryza sativa Japonica Group Os10g0467900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17724353..17730510

Sequence Coding Region

17727395..17730280

Expression

GEO Profiles:Os10g0467900

Genome Context

<gbrowseImage1> name=NC_008403:17724353..17730510 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:17724353..17730510 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacgcggcgtgcttgtgctccacctgctgctcgtgtcggcctcgctgcgcggcgcgacggccgcgccgggcgaggcggaggcgctgctcgcgtggaaggacaccctgccgcgctcggcggcggcggcggccggcgtcctcgggtcgtgggcgacgccgtcgccgcagcagccgaacgcgaaccccgcgtcgcggcgcgcgtggcgcggcgtggcgtcgacgcgtcgggcgtcgtggtgggcgtcgacgtggcggcgcgggggtcgccgggacgctcgacgccctcgacctctcgtcgctgccgggcctcgccgcgctcaacctcagcctcaactcgctcacgggctccttcccgtcgaacgtgtcgtcgccgctgctcagcctccggtccatcgatctgtcgagcaacaacctctccggcccgatcccggcggcgctgccggcgctcatgcccaacctcgagcacctcaacctctcgtccaaccagttctccggcgagataccggcgtccctcgcgaagctgacgaagctccagagcgtcgttcttggctccaacctcctccacggcggcgtgccgccggtgatcggcaacatctccggcctgcgaacgctcgagctctccggtaacccgttgggcggcgcgatccctaccactctcggcaagctccggtcgctggaacacatcaacgtcagcctcgccgggctggagtccaccattcccgacgagctcagcctctgcgccaacctcaccgtcattggcctcgccgggaacaagctcaccggcaagctgccggtagcgctggcgaggctgacgagagtgcgggagttcaacgtctccaagaacatgctctccggcgaggtcttgcccgactacttcaccgcctggaccaacctcgaggtgttccaggcggacggcaaccggttcaccggcgagatccccacggcgatcaccatggcgtcgaggctggagttcctctccttggcgaccaacaacctctccggcgcgatcccgccggtgatcggaacgctcgccaacctcaagctcctcgacctcgccgagaacaagctcgccggtgcgatcccccgcacgatcggcaacctcacgagcctcgagacgctgcggctgtacaccaacaagctcaccggccggctccccgacgagctcggcgacatggcggcgctgcagaggctgtccgtaagcagcaacatgctggagggcgagctcccggcggggctcgcgcggctgccgaggctcgtcggcctcgtcgccttcgacaacctcctctccggggccatcccgccggagttcggccggaacggccagctctccatcgtcagcatggcgaacaaccgcttctccggcgagctgcctcgtggcgtgtgcgcgagcgcgccgcggctccggtggctcggcctcgacgacaaccaattctccggcaccgtgccggcgtgctaccgcaacctgaccaaccttgtgcgcctccggatggcacggaacaagctcgccggcgacgtgtcggagatcctcgcgtcgcaccccgacctttactaccttgacctgtccggcaactcgttcgacggcgagctccccgagcactgggcgcagttcaagagcctctcgttcctccacttgagcggcaacaagatcgccggagcgattccggcgagctacggcgccatgtccctgcaagatttggacctctcgtcgaaccgtctcgccggcgagatcccgccggagctcgggagcttgccgttgaccaagctgaacctgcgccgcaacgccttgtcgggacgtgtccctgcgacgctcgggaacgccgcgagaatggagatgctcgacctgtccgggaacgcgctcgacggcggcgtgccggtggagctgacgaagctggccgagatgtggtacctcaacctgagcagcaacaacctctccggcgaggtgccgcccctgctcggcaagatgaggtcgctgacgacgctggatctcagcggcaaccccggcctgtgcggccacgacattgccgggctgaactcttgcagctcgaacaccaccaccggcgacggccactccggtaagacgaggctggtgctcgccgtcacgctctccgtcgccgccgcgctgctggtgtccatggtggccgtggtttgcgcggtgtcacgcaaggcgaggcgagccgccgtcgtcgtagagaaggcggagacgtcggcgagcggaggcggcgggagctcgacggcggcggcggtgcaggcctcgatatggagcaaggacacgacgttctccttcggcgacatcctggcggcgacggagcacttcaacgacgcgtactgcatcggcaaggggagcttcgggaccgtgtaccgcgccgacctcggcggcgggcgcgccgtcgccgtgaagcggctcgacgcgtcggagaccggcgacgcgtgctggggcgtcagcgagaggagcttcgagaacgaggtgagggcgctgacgcgggtccgccaccgcaacatcgtcaagctccacggcttctgcgccatgggcgggtacatgtacctcgtgtacgagctcgccgagcggggcagcctcggcgcggtgctgtacggcggcggcggcggcggcggctgcaggttcgactggccggcgaggatgagggcgatcaggggcgtcgcgcacgcgctcgcctacctccaccacgactgctcgccgccgatgatccaccgcgacgtctccgtcaacaacgtcctcctcgacccggactacgagccgcgggtgtcggacttcggcacggcgaggttcctcgtccccggccgctccacctgcgacagcatcgccggctcctacggctacatggcaccaggtacaaactgtccgtacatccatagccacacagggtga</cdnaseq>

Protein Sequence

<aaseq>MHAACLCSTCCSCRPRCAARRPRRARRRRCSRGRTPCRARRRRR PASSGRGRRRRRSSRTRTPRRGARGAAWRRRVGRRGGRRRGGAGVAGTLDALDLSSLP GLAALNLSLNSLTGSFPSNVSSPLLSLRSIDLSSNNLSGPIPAALPALMPNLEHLNLS SNQFSGEIPASLAKLTKLQSVVLGSNLLHGGVPPVIGNISGLRTLELSGNPLGGAIPT TLGKLRSLEHINVSLAGLESTIPDELSLCANLTVIGLAGNKLTGKLPVALARLTRVRE FNVSKNMLSGEVLPDYFTAWTNLEVFQADGNRFTGEIPTAITMASRLEFLSLATNNLS GAIPPVIGTLANLKLLDLAENKLAGAIPRTIGNLTSLETLRLYTNKLTGRLPDELGDM AALQRLSVSSNMLEGELPAGLARLPRLVGLVAFDNLLSGAIPPEFGRNGQLSIVSMAN NRFSGELPRGVCASAPRLRWLGLDDNQFSGTVPACYRNLTNLVRLRMARNKLAGDVSE ILASHPDLYYLDLSGNSFDGELPEHWAQFKSLSFLHLSGNKIAGAIPASYGAMSLQDL DLSSNRLAGEIPPELGSLPLTKLNLRRNALSGRVPATLGNAARMEMLDLSGNALDGGV PVELTKLAEMWYLNLSSNNLSGEVPPLLGKMRSLTTLDLSGNPGLCGHDIAGLNSCSS NTTTGDGHSGKTRLVLAVTLSVAAALLVSMVAVVCAVSRKARRAAVVVEKAETSASGG GGSSTAAAVQASIWSKDTTFSFGDILAATEHFNDAYCIGKGSFGTVYRADLGGGRAVA VKRLDASETGDACWGVSERSFENEVRALTRVRHRNIVKLHGFCAMGGYMYLVYELAER GSLGAVLYGGGGGGGCRFDWPARMRAIRGVAHALAYLHHDCSPPMIHRDVSVNNVLLD PDYEPRVSDFGTARFLVPGRSTCDSIAGSYGYMAPGTNCPYIHSHTG</aaseq>

Gene Sequence

<dnaseqindica>231..3116#gtgcgcttgatggcgcccgcccaaccaccgccggctcagtcgctctaacacctctcgatcacctccttgcaagcaatgctagccatggccgccgccgcgctctcgccggagcgcgtccagtcgtcgtagcccctactcgccggcgccgctccaatcaccgtggttcagccacccgcggcggagtatgaagcgccacgacgcgggaacgccgccgcggcgcgcgcgcgaccatgcacgcggcgtgcttgtgctccacctgctgctcgtgtcggcctcgctgcgcggcgcgacggccgcgccgggcgaggcggaggcgctgctcgcgtggaaggacaccctgccgcgctcggcggcggcggcggccggcgtcctcgggtcgtgggcgacgccgtcgccgcagcagccgaacgcgaaccccgcgtcgcggcgcgcgtggcgcggcgtggcgtcgacgcgtcgggcgtcgtggtgggcgtcgacgtggcggcgcgggggtcgccgggacgctcgacgccctcgacctctcgtcgctgccgggcctcgccgcgctcaacctcagcctcaactcgctcacgggctccttcccgtcgaacgtgtcgtcgccgctgctcagcctccggtccatcgatctgtcgagcaacaacctctccggcccgatcccggcggcgctgccggcgctcatgcccaacctcgagcacctcaacctctcgtccaaccagttctccggcgagataccggcgtccctcgcgaagctgacgaagctccagagcgtcgttcttggctccaacctcctccacggcggcgtgccgccggtgatcggcaacatctccggcctgcgaacgctcgagctctccggtaacccgttgggcggcgcgatccctaccactctcggcaagctccggtcgctggaacacatcaacgtcagcctcgccgggctggagtccaccattcccgacgagctcagcctctgcgccaacctcaccgtcattggcctcgccgggaacaagctcaccggcaagctgccggtagcgctggcgaggctgacgagagtgcgggagttcaacgtctccaagaacatgctctccggcgaggtcttgcccgactacttcaccgcctggaccaacctcgaggtgttccaggcggacggcaaccggttcaccggcgagatccccacggcgatcaccatggcgtcgaggctggagttcctctccttggcgaccaacaacctctccggcgcgatcccgccggtgatcggaacgctcgccaacctcaagctcctcgacctcgccgagaacaagctcgccggtgcgatcccccgcacgatcggcaacctcacgagcctcgagacgctgcggctgtacaccaacaagctcaccggccggctccccgacgagctcggcgacatggcggcgctgcagaggctgtccgtaagcagcaacatgctggagggcgagctcccggcggggctcgcgcggctgccgaggctcgtcggcctcgtcgccttcgacaacctcctctccggggccatcccgccggagttcggccggaacggccagctctccatcgtcagcatggcgaacaaccgcttctccggcgagctgcctcgtggcgtgtgcgcgagcgcgccgcggctccggtggctcggcctcgacgacaaccaattctccggcaccgtgccggcgtgctaccgcaacctgaccaaccttgtgcgcctccggatggcacggaacaagctcgccggcgacgtgtcggagatcctcgcgtcgcaccccgacctttactaccttgacctgtccggcaactcgttcgacggcgagctccccgagcactgggcgcagttcaagagcctctcgttcctccacttgagcggcaacaagatcgccggagcgattccggcgagctacggcgccatgtccctgcaagatttggacctctcgtcgaaccgtctcgccggcgagatcccgccggagctcgggagcttgccgttgaccaagctgaacctgcgccgcaacgccttgtcgggacgtgtccctgcgacgctcgggaacgccgcgagaatggagatgctcgacctgtccgggaacgcgctcgacggcggcgtgccggtggagctgacgaagctggccgagatgtggtacctcaacctgagcagcaacaacctctccggcgaggtgccgcccctgctcggcaagatgaggtcgctgacgacgctggatctcagcggcaaccccggcctgtgcggccacgacattgccgggctgaactcttgcagctcgaacaccaccaccggcgacggccactccggtaagacgaggctggtgctcgccgtcacgctctccgtcgccgccgcgctgctggtgtccatggtggccgtggtttgcgcggtgtcacgcaaggcgaggcgagccgccgtcgtcgtagagaaggcggagacgtcggcgagcggaggcggcgggagctcgacggcggcggcggtgcaggcctcgatatggagcaaggacacgacgttctccttcggcgacatcctggcggcgacggagcacttcaacgacgcgtactgcatcggcaaggggagcttcgggaccgtgtaccgcgccgacctcggcggcgggcgcgccgtcgccgtgaagcggctcgacgcgtcggagaccggcgacgcgtgctggggcgtcagcgagaggagcttcgagaacgaggtgagggcgctgacgcgggtccgccaccgcaacatcgtcaagctccacggcttctgcgccatgggcgggtacatgtacctcgtgtacgagctcgccgagcggggcagcctcggcgcggtgctgtacggcggcggcggcggcggcggctgcaggttcgactggccggcgaggatgagggcgatcaggggcgtcgcgcacgcgctcgcctacctccaccacgactgctcgccgccgatgatccaccgcgacgtctccgtcaacaacgtcctcctcgacccggactacgagccgcgggtgtcggacttcggcacggcgaggttcctcgtccccggccgctccacctgcgacagcatcgccggctcctacggctacatggcaccaggtacaaactgtccgtacatccatagccacacagggtgaaaacggtcggaatctaacgacgctgctagttgattatatttatcatttaaactactcagtacgatattaatgtgatgcataaagaaattagaaaaaacaaattttatatctatgatatttaaaatcttaatagtggtggtgtccattcgcacgcaatctctaccattgacatatgggtctcataatctatactattacctttcagcaaatcttcaatttcaccattagctctcccaaatttcaaaatcacctacttgttgaaataagaaaaactatagtattacttagactaaatagggtcttattattaactagctgggtgacccgcgcaattacgcggctagcacccaaacaaaatcatatattattttagtatgattcatttaaaatttattaaataactagctcattgtcttaagactttgaaagaccaaaccttatcatcctcgtgtttctaattatatagtttttaaaagtcacaccagttgctaccccttatgtcatctccttctttatttgcttgctcgatctatcactatttctattcatttttcttggaacatttaaaaattggattttatagtttttagagtttattgttatgttgggtttcatttttataatatctagatgtcccgtcaaacgttgccattatactcctctatggcccgtccactgtctcttctctttattgtcattgagatttttaaaatcgaacataattatcatttgtgttcattttttactttctagaagtcccgccaaaccatcagcggctttgccattgtactcctctacggttcgcccgctgcctcccttctttattgtcattgagattttaaaatcaaacatgattattattgttttttttttactttttagaagttccaaacctttaaaaattaaacttgtagttttattttttataatttttagaagtcccttcaaacgatgccactatgcccctctacagcccgtccgccgcctactctttatcgtcattgtgattctaaaaatcgaacataactatcgttagaatttattttttattttctagaagtcccgtcaaccgtcggcggctctgcaactatactcttatacaccctgcccactgtttttcctttttattgtcattgagattttaaaaatcgaatatgattatcaatggtgttttttttttactttctagaagtctcggcaaccgccttacttgtttgcttcacggcctacttgacgtccctccttttaatcgtcattaggattctatttggtgttttattaacaatttttatatgtcgtatcaaccgccactactctactcctttatatgcatggtacttaatttatctcgtcatgtgttttagatggttttctttcaatagtctttatttttatcacaaattttatacattgtattcctaattgaaatcttatttttctttttctattttcagaatttaattttttttagaaaaattagttaataccgtattgtgtttttttaatgtttttattttctattttcaattttagttgtttcaaaattgtattcctacttgaactctcttttaatttttctaattttggatattattttattttttattcaaaatttttattaatctcgtattaggttcttatatggattcttcgttcaatattgcctatttttaatttcgaatttcatctaattttaaattgtattcatacttgaactcttcttttattttcttttgctaatttcggatttatttttattccgaattttaattaatctcatattgggttcttgtatgtactctttttttaatattccttatttttaattccgactttcagttatttttaaattgtattcctacttggactctcctttccttttctaattttggattttattttatttttatttcgaattttgattaatctcgtattgggttcttatatggaaacttctttcaatattgcttatttttaattccgaatttcagctatttttaaactgtatttctacttggactctcctttccttttctaattttggatattattttatttttattttgaattttgattaatctcgtattgggttcttatatggaaacttatttcaatattgcttatttttaattctgaattttagatatttttaaattgtacttctacttggactcttcttttctttttttttttctttttctctgattaatgtgggaatttctagcccccacagcgaacatggtgcctcctttcaatgctgttttaataatataatagattgattgattgattcaataagctagaaatttaatttgttttctgttgcaatgcacggactctaagctagtatagccaaaaaaaaaaaggaaaaccgttgaaaacagtgccccttaaacataaacggcgcccaattgattgagaattttcgtgaccattttcaccccttatacacaccgaatccgccattgacgctgataccatgtttatcttgcggtcttgccgcagagctggcgtacatgagggtgacgaccaagtgcgacgtgtacagcttcggcgtcgtggcgatggagatgctcatgggcaagtaccccggcgggctcatcagctcgctgcaacactcgccgcagtcactgtcagccgaggggcacgacggcagcggcggcggcggcggcgaggaggcgtcggcgtcggcgtcgcgccggctgctgctcaaggacgtggtggatcagaggctggacgccccggcggggaagctggccgggcaggtcgtgttcgccttcgtcgtggcgctgtcttgcgtccggacgagccccgacgcccggccgacgatgcgcgccgtcgcgcaggagctcgccgctcgccggcgaccgatcctggacaggccgttcgagatgatcaagataggcgacctgacaaattctcacagatgagagagaaaatttgtgacaaattatcgattgctttgtgcttatgtgattccgttagtagattctcattagcatctgtatagtttttgtacagtgatatttagtcccgtttgag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0467900, RefSeq:Os10g0467900