Os01g0182500

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Revision as of 04:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0182500| Description = Similar to GIGANTEA protein| Version = NM_001185279.1 GI:297719692 GeneID:9272136| Length = 3346 bp| Definition = O...")
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Gene Name

Os01g0182500

Description

Similar to GIGANTEA protein

Version

NM_001185279.1 GI:297719692 GeneID:9272136

Length

3346 bp

Definition

Oryza sativa Japonica Group Os01g0182500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4325676..4329021

Sequence Coding Region

4325676..4325843,4326256..4326336,4326876..4326992,4327120..4327207,4328645..4329021

Expression

GEO Profiles:Os01g0182500

Genome Context

<gbrowseImage1> name=NC_008394:4325676..4329021 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4325676..4329021 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcgaagaagcggaggccggaggaggaggaggcggcgggggcggaggaggagatgcacctggcgttcaggggcgccgccaacgcgctgtcgcaggtgtacgggcaggccgtggccgcgcaggagaagtcgttccgcgccggcgagcgccgcgccatggagaatgtctatcgatggatttgcagcaagcatcaagaaggtttggaggtgtctgttgccgatctagttgctttcctgcagactgagattgagcacagagcaggggaggtgccggggtcattgcagcatacaagtgcacagccagcatgtcaatttccttctgcaaatattcaaagcaattcgttctcttttgggaatcgtatggcactatcaactccctaccagatggaattggagctcaaagcaaccatcctccccaacatcagaatttcatgcactgcaactcgaaactggccggcaagtcatcctttcctactcgctgatcctacagcagctgcttgcagtgacagtcatggtgtggccttgtcagcaagtgagtgggcagccgagctccttcgccgccgcggtgaggaaggcgagcgtcagcccggtggcgcggcggctgtgggcttcccactctatgcatctctccacatcggcttgccagttgatgatgcttgctgccaagcactggtaggttgggctctggatgccattccggtgttccccttggatgagcttactggagtttatttgtccgctgttcaagatgtcgcgaaggacggacatgctgagtgcacggacatgcgcgctggggtgcgaaagacagcggatggtggttga</cdnaseq>

Protein Sequence

<aaseq>MAAAAKKRRPEEEEAAGAEEEMHLAFRGAANALSQVYGQAVAAQ EKSFRAGERRAMENVYRWICSKHQEGLEVSVADLVAFLQTEIEHRAGEVPGSLQHTSA QPACQFPSANIQSNSFSFGNRMALSTPYQMELELKATILPNIRISCTATRNWPASHPF LLADPTAAACSDSHGVALSASEWAAELLRRRGEEGERQPGGAAAVGFPLYASLHIGLP VDDACCQALVGWALDAIPVFPLDELTGVYLSAVQDVAKDGHAECTDMRAGVRKTADGG </aaseq>

Gene Sequence

<dnaseqindica>1..168#581..661#1201..1317#1445..1532#2970..3346#atggcggcggcggcgaagaagcggaggccggaggaggaggaggcggcgggggcggaggaggagatgcacctggcgttcaggggcgccgccaacgcgctgtcgcaggtgtacgggcaggccgtggccgcgcaggagaagtcgttccgcgccggcgagcgccgcgccatggtacgtccttggcctccgcctgcccgttcccctccccaccgatcggtggccgagtcgcctgaagaactgcgttcttggggccttgagtcttggggtccggtttagttttgggattttacgcggagatgcgaagggggatgggatcctgcttcgagttctttcgagttgctggtgcgttggggataggggaatttatgttctggacgaatttttagctgagaattatgggtgtggtttggtatggtgggattggagagtttctcggtgaaatgctgcggctgatcttgaaattagcttctgcagttgtaaattgttggaaatccatcagtctgagttcttggatgtgcttccatattgtgaacttatgattttattatcaaattgattcaatcctgtttctgaattttggcaggagaatgtctatcgatggatttgcagcaagcatcaagaaggtttggaggtgtctgttgccgatctagttgctttcctgcaggtcagtttgtctttatctttttctttagtttaatccctgtttgacatttatgctagccaatgccttgtgtcatatgcaaagattgagagtcagggtgacttactagtgttcaatttatagaatgatttttgcatgtggatcatgtcacacattgctggctaaccaataggatcaaatgtgactctactacaactgtgaattgtctgatgagtataatctttatgaatgtgtaataatgattcagtttcgagcacatctacaatttgtatagccagggtctggagattatactatgaaacaattgtactagttaagtattacgtcagatgtatgtacataagagccatgaaaatgtttagtgaagcactgaaggtgctgaaatcaaaaccacattgccttttgagaattcattcagtacaataggcaggccatagcgttcccttttctttcctttttcctttttttcccctagctctgttgttattccagtatgtgtatgcggctcaaatccttgcctgatgcttctcttctacgcacagactgagattgagcacagagcaggggaggtgccggggtcattgcagcatacaagtgcacagccagcatgtcaatttccttctgcaaatattcaaagcaattcgttctcttttgggaatgtaacggatgcacttaactcccatacagcgcaaactggccaaacacaaactgccggcgtgttaaatgctccgcccaacccattgcggcaaaatttacactcaaatcatcatccgattcattgttcagcgtatggcactatcaactccctaccagatggaattggagctcaaagcaaccatcctccccaacatcagaatttcatgcactgcaactcgtatgaaccctccatggatgagtcatgatgcttgttgaggatgtgagccatatgaaaacccgcagcttgtttgcttagttcccccggagccttcaagatctgatatcaccttaattgctggagaagtcccatcgattgccgatagatatgctcctctccatctgggtatcgcaatgcaaagcttgtaagatgtcgatatcatcttcacttttttctgacatcttgtacattacaaccaagaaagtccccttcaggtcccgcgtgttgattgaaagattgaagctgcaacctttgcttcagcgtaattgtgcttgcaatattagttcttttctgttgcttgcaaaaaccatgctctggttaacaaggatcaggaggacgaggatggtgcattagttgttgatgaatttactgctgtgttccatgtatatctgttaaagctgtattggttcagagagcctgagagcattgtttcacccttttttttttttgcactctcttttggtgtgtgaatgatttctagttaaaaggtgttgtaaccttacagatattcagaccatacattggttagaagaaagtcttgtataatagataatgtaaacagagaagtctgtgtcctttgataattgatacttttctgctagagtaagttttccatcaaatcaaattctcaaaaaaccgagcgcttggtggaaatggaacacgtatgatctcacgcttgtcaattattactcgggtctgtctgctgtgttattgcataatttaacgaatttaccgaatcaaatgcatcgtttatattcattgtttctaatttgcagcgctaccctataagcggaattttctcttcttcacattgtatttttttgaggacgaggggttatacgtaagaaacataacaccctataagtggaattttctcttcttcgcattgtatttttttgaggacgaggggttatacgtaaaaaacataacagggtgtcagacggtccgaggacctatgcgatattccgtcgaaacgcgtggagctttttgcaaaagtgcaaaacactcgtaatcaaaaaaaaaaaaaaaaggagaaagtcggaaccatattttcgtgacgaactataaacaaatgagagttacagatgatccaccgctgaacgttcacgaactacgagcaaaacggaaattgctgaatattcatttgcaagttcagcaggaaactggaaatagatacaacagcagaaaaggatatacctctgcttccccggttaccatatggaaagatttttacgttacagacatacaagttacagcacaagcagttttcatatgcttgaacatctaatgtcagcggtagcacattaaccaaaagtaaagtaaaaatcacatcttgggagcaagccccgtatcatgcttgggaacatcagctaatatcagtcttaaatcacatctcaggaaactggccggcaagtcatcctttcctactcgctgatcctacagcagctgcttgcagtgacagtcatggtgtggccttgtcagcaagtgagtgggcagccgagctccttcgccgccgcggtgaggaaggcgagcgtcagcccggtggcgcggcggctgtgggcttcccactctatgcatctctccacatcggcttgccagttgatgatgcttgctgccaagcactggtaggttgggctctggatgccattccggtgttccccttggatgagcttactggagtttatttgtccgctgttcaagatgtcgcgaaggacggacatgctgagtgcacggacatgcgcgctggggtgcgaaagacagcggatggtggttga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0182500, RefSeq:Os01g0182500