Os01g0183100

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Revision as of 04:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0183100| Description = WD40-like domain containing protein| Version = NM_001048759.1 GI:115434931 GeneID:4325333| Length = 4290 bp| Defini...")
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Gene Name

Os01g0183100

Description

WD40-like domain containing protein

Version

NM_001048759.1 GI:115434931 GeneID:4325333

Length

4290 bp

Definition

Oryza sativa Japonica Group Os01g0183100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4396653..4400942

Sequence Coding Region

4397036..4397155,4397246..4397335,4397445..4397583,4398125..4398243,4398492..4398559
,4399409..4399457,4399713..4400732

Expression

GEO Profiles:Os01g0183100

Genome Context

<gbrowseImage1> name=NC_008394:4396653..4400942 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4396653..4400942 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccagtgccaagcccgccgctgaacagaaggctatggaagggggcgagcaggaggctctggatgaaatggagaagaaggtgcacaagtactcgcgggggaaggctgcttaccttgggactcttcgcgacaagaaattgaaagggcagctcgccgcaagagagaagctctatggacactccgccaaagccgccgttcagaccgagaagtggctcttgcctaccgagggcggctatttagagcctgatgatgatggtctggagaagacgtacagatatcagcaaacttcgctccgggaggacgtggatcttttgagttcaagaaagccatttgatatgatcttacctttacttggcccttatactctaggatacacgggaaatggccggtatatggtagtaggtggacgaaaaggtcatgtcgctatgatggatatgttgaatttggaactcgtcaaggagtttcaggtgagggaaactgtgcgcgatgtggcattcttacataatgagcaactctatgctgtcgcccagaaaaagtacccctacatatataatcgacatggcacagaaattcactgcttaaaggaacatggtaaatcgttgaagctccaatttctggaaaagcactttctcttgtcatcaataaacagctttgggcagctccattaccaagatataagcactggtgagatggttgcaaattacaggacaggtctgggacgtactgatgttatgcggctaaatccttacaatgctgttattggccttgggcatgctggtggcaaagttaccatgtggaagccaaccagtgtgaaaccccttgtcacaatgctgtgccatagtggccctgtgacagccattgcatttgacaggggtggtcatcttatggcaacagcaggtgttgacaggaaggtcaagatttgggatctcaggaagtatgaggttataaattcttatgctgcacgtgcacaatccctggatttcagccagaaaggtttgttggcctgcagcaatggatctcaagtagagatattcagggataccgggggacaggattataaaatttatatgaaacatagaatggtaaagggataccagattgggaaggttttgttccgtccttacgaggatgttctggggattggtcactccatgggcctttctgccattcttgttcctggatctggtgagccaaactttgatacctttgttgacaaccccgttgagacttccaagcagagaagggagaaggaggtgcaatccctgcttaacaagctccagccagagacgataatgcttaatccgaacatgatagctaccgtaagaccttcaaggaagaaagagaagaagaccaagaaggagattgaggaggagatggaagacgccgtagaggctgccaagagcatcgagttcaagaagaagaccaagggtaggagcaaagccagcaagcgggccaagaagagggaggaagaagttttgaaagccaaaaggccgttcctggagcaacacaaggaaaacgatgggaggcctgacaagaaacagcgggtcagcgaggagattgagctgccaaaggccttgcagcggttcgcaaagagtaggcagtga</cdnaseq>

Protein Sequence

<aaseq>MASAKPAAEQKAMEGGEQEALDEMEKKVHKYSRGKAAYLGTLRD KKLKGQLAAREKLYGHSAKAAVQTEKWLLPTEGGYLEPDDDGLEKTYRYQQTSLREDV DLLSSRKPFDMILPLLGPYTLGYTGNGRYMVVGGRKGHVAMMDMLNLELVKEFQVRET VRDVAFLHNEQLYAVAQKKYPYIYNRHGTEIHCLKEHGKSLKLQFLEKHFLLSSINSF GQLHYQDISTGEMVANYRTGLGRTDVMRLNPYNAVIGLGHAGGKVTMWKPTSVKPLVT MLCHSGPVTAIAFDRGGHLMATAGVDRKVKIWDLRKYEVINSYAARAQSLDFSQKGLL ACSNGSQVEIFRDTGGQDYKIYMKHRMVKGYQIGKVLFRPYEDVLGIGHSMGLSAILV PGSGEPNFDTFVDNPVETSKQRREKEVQSLLNKLQPETIMLNPNMIATVRPSRKKEKK TKKEIEEEMEDAVEAAKSIEFKKKTKGRSKASKRAKKREEEVLKAKRPFLEQHKENDG RPDKKQRVSEEIELPKALQRFAKSRQ</aaseq>

Gene Sequence

<dnaseqindica>384..503#594..683#793..931#1473..1591#1840..1907#2757..2805#3061..4080#aggccaatacatccgcgcgccgccgactcctcctcttgccccccctctcgccgcgccgccgccgcctctgcccgtcagacacacctcccccctcctcgaggacaagggactctcctctctcgccggcggcggccgtcggcgacgacgtactagtactccacccccactcagctgtactgacgcggcttgtgtggatccgagcttggattggtcgattccttctgttctcgtgagtcggtctttgccctcgcggttcgttttgctctgccttttttttaggttgctatctgtatattatgtgaacaatggcgcaccgaagttcactcagattcttgactgttttttgttgtttgctgttgctgttgccgctgttgaaggtaaccatggccagtgccaagcccgccgctgaacagaaggctatggaagggggcgagcaggaggctctggatgaaatggagaagaaggtgcacaagtactcgcgggggaaggctgcttaccttggggtgagactgctgctaaactacttcttcttcaaaaatctgcgtccctgtttgattcacatgtgtatgtgtggtttatgttgggtttatcagactcttcgcgacaagaaattgaaagggcagctcgccgcaagagagaagctctatggacactccgccaaagccgccgttcagaccgagaaggtgcggttgttgattcttgtaatgaatgtttctgggagcatatgcaacacaatgggagaattgagaatctgtcgtttgttgatctttatttttgcttccaattttgcagtggctcttgcctaccgagggcggctatttagagcctgatgatgatggtctggagaagacgtacagatatcagcaaacttcgctccgggaggacgtggatcttttgagttcaagaaagccatttgatatgatcttaccttgtaagtgtctaaatctgttttttttgttctttgaagctgtgatatcataggcggcttgttaaatcaagccctaattttttcccctgctacattagatcttgataaatgaaaacccctatctcaagaaaccatcatcttgcttaatttatccattactaattttggtttaaaaaaaactaaaaagaagtgtagaaggaacaccattagtgttttcaattgaattattttatttccaatacacttattttgtagccactataaaactttccctgttcctcttctgtaaattcccccttcttcacttcttctaattgtggcaggggtacactgttctatttatctggatgaatgctgatttttttttgtttaaatatatataaccatagcatttatttatcttcatttctgtatcatcatgtaacaatgtatcttttttggaataattgctagatagcacttttcatctacttgctgctattaacttttcggatgacaaccaacaagttatgagggattgactagctcttctcttatgatgcagtacttggcccttatactctaggatacacgggaaatggccggtatatggtagtaggtggacgaaaaggtcatgtcgctatgatggatatgttgaatttggaactcgtcaaggagtttcaggtcattttttcagaactcaagacttttcccagcatgcattttttttccttatatgagtcatattttttacgtcttcctactggtatttctatccatgcgtttatggcactttctgttgtagtagaggtttctggttatgaaagaacagaaccatctttatcctggtcaaattcctaccatgtcccctattctttcaagttcttttccctggctatagtaatcaacatgactgtttttaatttgcacaggtgagggaaactgtgcgcgatgtggcattcttacataatgagcaactctatgctgtcgcccagaaaaagtaatttccttaatatactcaatctttgcaatatttttccaatgctcataacataggtcaacatgttccatattctggtcttgagtcttgacaaagatgtagacaaactgagaggtcaatgaagcaaaaagtgcaagaatcaacctaggctgactatataaacaaactgagaggtcaatgaagcaaaaaatgcaagaatcaacctagtctgactatataaacaaactgagaggtcaatgaagcaaacagtgcaagaatcaaactaggctgattgctcagaggctcagagctttaaagtttaaacacacataagtacttctagcacattatggtttggtttgtggatcaattaggctatagaataatgcaagatttcctgtatgattcgttataaaaatttgctggagtggtataattctatgctacttccgtgaacaagaagcctaatttctggcagttttttgaactgctagtacatagattgaggatgagcaaattgagcaatgtgcggtaggctggggtagaattgccttctgagttctgattgccctactggagtataagtcattgatctgtccctggaaatgatgatcattcctgtacatggcagggaacctttgtttttttttttggccagcccagaggtggagccacaccaaaatttggtttttaaaatattttctatattttactttttttttcactagcgtgtaatacatagcttatctccacagttttccacgtctatttttgatgaaatttgtgggcataactccaaatattgtcaaacattttatgttacctttccatgtaatttttagacttcctcatgtgatattcttttaacaggtacccctacatatataatcgacatggcacagaaattcactgcttaaaggtaattatgatgtaaacacattggctttctgaatgaatgtgcctagctattgatgattttgagaaattgttagttttgttgttgtttcacatgttttcagttaacatgcaggaaagttaaaactttatagctatttaatttttactttatgtatgtctatgctttgatgtggtatactggtatctctcaaagttcagtaaagatttgaatgtatatcttatcttgtttaggattctgaatgttttgtgtccacaggaacatggtaaatcgttgaagctccaatttctggaaaagcactttctcttgtcatcaataaacagctttgggcagctccattaccaagatataagcactggtgagatggttgcaaattacaggacaggtctgggacgtactgatgttatgcggctaaatccttacaatgctgttattggccttgggcatgctggtggcaaagttaccatgtggaagccaaccagtgtgaaaccccttgtcacaatgctgtgccatagtggccctgtgacagccattgcatttgacaggggtggtcatcttatggcaacagcaggtgttgacaggaaggtcaagatttgggatctcaggaagtatgaggttataaattcttatgctgcacgtgcacaatccctggatttcagccagaaaggtttgttggcctgcagcaatggatctcaagtagagatattcagggataccgggggacaggattataaaatttatatgaaacatagaatggtaaagggataccagattgggaaggttttgttccgtccttacgaggatgttctggggattggtcactccatgggcctttctgccattcttgttcctggatctggtgagccaaactttgatacctttgttgacaaccccgttgagacttccaagcagagaagggagaaggaggtgcaatccctgcttaacaagctccagccagagacgataatgcttaatccgaacatgatagctaccgtaagaccttcaaggaagaaagagaagaagaccaagaaggagattgaggaggagatggaagacgccgtagaggctgccaagagcatcgagttcaagaagaagaccaagggtaggagcaaagccagcaagcgggccaagaagagggaggaagaagttttgaaagccaaaaggccgttcctggagcaacacaaggaaaacgatgggaggcctgacaagaaacagcgggtcagcgaggagattgagctgccaaaggccttgcagcggttcgcaaagagtaggcagtgacaatggagcacagaattttctttttctttttgtttgctgcaacctcatatttatcactagtgtgcattgtatcgtgtagctggcaaatgtcatatctgcttccttgtgaaccataggcttttgcacatgaggcaatggtgcacagaagtaagcacccaaattttgttctgaatcttttgtgatatgttggtcaaatgtgcatgtgacccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0183100, RefSeq:Os01g0183100