Os01g0187900

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Revision as of 04:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0187900| Description = Similar to Transcription factor MYBS2| Version = NM_001048789.1 GI:115434991 GeneID:4326766| Length = 4017 bp| Defi...")
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Gene Name

Os01g0187900

Description

Similar to Transcription factor MYBS2

Version

NM_001048789.1 GI:115434991 GeneID:4326766

Length

4017 bp

Definition

Oryza sativa Japonica Group Os01g0187900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4713730..4717746

Sequence Coding Region

4713943..4714515,4714645..4714853,4717310..4717628

Expression

GEO Profiles:Os01g0187900

Genome Context

<gbrowseImage1> name=NC_008394:4713730..4717746 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4713730..4717746 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgaggcggtgctcgcactgcagcaacaacggccacaacgcgcggacctgccccgcccgcggcggcggtggaggcggaggcggggtgaggctgttcggcgtgcggctcacgtcgccgccggaggtggcgatgaagaagagcgcgagcatgagctgcatcgcgtcgtcgctcgggagtggcggtgggtcagggggttcgtcgccggcgggaacgggaaggggaggaggaggagggggagagggcgcggccgggtacgcgtccgacgaccccacgcacgcctcctgctcgacgaatggccgcggcgagcggaagaaaggtacaccttggactgaagaagagcatagaatgtttctaatgggtctgcagaagcttggtaaaggagactggcgtgggatctctcgtaattttgttgtttccaggacaccaactcaggtggctagccatgctcaaaagtacttcattagacagacaaactcatcaagaaggaagaggaggtcaagcttgtttgacatggtcccagaaatgcccatggacgaatccccagtggtcgtagaacagcttatgctccatagtactcaagacgaagccacaagctcaaatcaattgccaatatcacatcttgtgaaacagaaggaacctgagtttgctagacacctgtcggatttgcagctaaggaagcatgaggaatctgagttcacagaaccttcactagcagcactagacttggagatgaaccatgctgcacctttcaagactaaatttgttctgacaatgccaacattctacccggcattaatacctgttccactaactctttggcctccaaatgttgctaatgtgggtgaatcaggcacaaatcatgaaatcctaaagcccactccagtgaatggaaaggaggtgatcaataaggctgatgaggttgttggcatgtccaagcttaccataggtgacggcagctctaactccatagaaccctctgctctttcccttcagcttactggaccgacaaatacaagacaatcagcttttcatgtgaacccaccaatggctggacctgacctaaataagagaaacaacagcccaattcatgcagtttga</cdnaseq>

Protein Sequence

<aaseq>MTRRCSHCSNNGHNARTCPARGGGGGGGGVRLFGVRLTSPPEVA MKKSASMSCIASSLGSGGGSGGSSPAGTGRGGGGGGEGAAGYASDDPTHASCSTNGRG ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNS SRRKRRSSLFDMVPEMPMDESPVVVEQLMLHSTQDEATSSNQLPISHLVKQKEPEFAR HLSDLQLRKHEESEFTEPSLAALDLEMNHAAPFKTKFVLTMPTFYPALIPVPLTLWPP NVANVGESGTNHEILKPTPVNGKEVINKADEVVGMSKLTIGDGSSNSIEPSALSLQLT GPTNTRQSAFHVNPPMAGPDLNKRNNSPIHAV</aaseq>

Gene Sequence

<dnaseqindica>3232..3804#2894..3102#119..437#gaaaagaacaagaagacagatagagaaggagaaaacccaccgcgcgcggcggcggcggcggcgagggtcgacgaggcgacgcattttggtgatctcgtggtgtcacggtgcgtgtgcgatgacgaggcggtgctcgcactgcagcaacaacggccacaacgcgcggacctgccccgcccgcggcggcggtggaggcggaggcggggtgaggctgttcggcgtgcggctcacgtcgccgccggaggtggcgatgaagaagagcgcgagcatgagctgcatcgcgtcgtcgctcgggagtggcggtgggtcagggggttcgtcgccggcgggaacgggaaggggaggaggaggagggggagagggcgcggccgggtacgcgtccgacgaccccacgcacgcctcctgctcgacgaatggccgcggcgagcggaagaaaggttagattccttttttcttctttcttcttccttctgtaattccgttcaaacatacactctagcttgcatcctgtccatgctagctgcgtgctcggtgaaatgaaatgcggcgacgagaggtacagctgcgcgctgttcatactcttctgcttggtgaatcaactgagcaagtagaaatgctgcgttttgcgtttgtttgcttctgattaacgcgtcgcgttccatgcacctaccgcctcatggagcacgctcggctcagcgagcggtaggaatcttttctattttcatttcttgctgccaagacaaggaaaaatatgggtttcctttttgtgaaataaaatattctagttcgattgcttcaggtatcgcaacttgtgcgcaaggaaaacaaaattttgtggttgaatcgcataatgtactgttccttttaatttgtcggtatgtggtatgttcctctactttcacggatcctttatgcaaccaagatagcaacattaaagataaggaaaatcatcaacagaaacaaaaagatgtatccttttgatatcaaagagttaaagacccaatttgattcaagaaattaacaaatgattgacaattttgtagagaagatcaagctatcttcttgtaatgaattcggagacatgttttaatagtcacgcctccctattttgttcgctagactcaaggtatggccgctatcattgctgaagatgcaatctataggaaccgtccagaatggccgacactaatcaacctagctaaatatcttttcccatctgattaagttacgtgcacatgtgcatcgcaagaagacctgtatagatcacattccgagagggacactgactggcccgggctaaggaccccacgtctctttgacctttaatttaatcacctgatcctaatggaatctagccacattggtttccagttggtttgaccagtcctaggtgtgcactatgtactttcttaatgtatttggtttggtagtgatatgctatttttttggtacatgtagaagagactttactggcacttggcttcaaagaaactgtaggggcaattcctagtttacttatagaccaagctagagcctgagtctgttttgattattatgaatcagctggcgctagtggttatgggatgaagccatctatctaaaagaattaagaacaaatctcaaaagggaactcacaatggagttcccttgtatgagcaacatctttagttgaaacaaaagcacctgtccctactacatgacagcatcatgctgattctgctgtaaaactttatggcaatgaatttgccaatagttatttgtcatgctttctggacattctttttacatggttaaaaattgaaaggcctttgaaccgtgagtgtccaccacaagtgctatgctgtattatttagtctatatccatactttctatggaggacttgcagcatgtacatccaagttgggcagcttcagagcttaatcgtattaatgatgagaggcaaagttattttcctttcccctttcatatttttcttgtgctggaaaaacctgctgcttgagcggttgatcttggtgaacagagattctagattatgcatacccagaattcaactatgttactccctccgtttcgaaatgtttgacgccgttgactttttagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatatttttatgtaggcacataattttacatatttcacaaaagtttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagtagtactgaatagaaggcaaacttatctaccctttcttctttacaaagctattattgtggttctggagtgtccattgtttgtgagatggaatcagatgaatcaattatagactcatgcatattattctacagagaatagcattactgatctaatattaaactcactagattgagatgcatcaaggttgatggttattatatataaacaaagtaagaaacccaaagcttgagattgtagtcaagctcaaaagtagtgattgatgctttgtctttgttgtaatgaatacatgctagtgaatggggagtattctggtgttagagggagtatgctacagtgctggtccctgcagttccagtgtgttttttggctgagcttgtcatgtactccgtagctggaatgatccagtgggtgtaaccctcggtgtgtgagttggttttacctctttgttgaactactgttggctctctgaaaaagccaggtcactatcaatataatgatctttcctctaaaaaaatggggtcgtggattattttttcacagaaaccatctgggatttttcagtccagtttcaactcaagggctgatgttgtgcttcaggtacaccttggactgaagaagagcatagaatgtttctaatgggtctgcagaagcttggtaaaggagactggcgtgggatctctcgtaattttgttgtttccaggacaccaactcaggtggctagccatgctcaaaagtacttcattagacagacaaactcatcaagaaggaagaggaggtcaagcttgtttgacatggtcccagaaatggtatgcaatttttgcttgcaattttcgcttgagacaggaggtgtctattatctccatatatgttaaattgtgtcctgatatttctatatcacgaccatcttatgttcgaatttcatcttcaacctgcagcccatggacgaatccccagtggtcgtagaacagcttatgctccatagtactcaagacgaagccacaagctcaaatcaattgccaatatcacatcttgtgaaacagaaggaacctgagtttgctagacacctgtcggatttgcagctaaggaagcatgaggaatctgagttcacagaaccttcactagcagcactagacttggagatgaaccatgctgcacctttcaagactaaatttgttctgacaatgccaacattctacccggcattaatacctgttccactaactctttggcctccaaatgttgctaatgtgggtgaatcaggcacaaatcatgaaatcctaaagcccactccagtgaatggaaaggaggtgatcaataaggctgatgaggttgttggcatgtccaagcttaccataggtgacggcagctctaactccatagaaccctctgctctttcccttcagcttactggaccgacaaatacaagacaatcagcttttcatgtgaacccaccaatggctggacctgacctaaataagagaaacaacagcccaattcatgcagtttgagaaagcatggaaaaggcctgctgggtcaaatcttatagattatatattacttccccaataccatagaatgttgcataaggtcctgagcatgtacttttgtagcagcttctgagttgtatcaccatattatgttctttgatatcgataatgaaaaatgttgtatgcatatacctttgataatacatcctccatcctttggagaaaatggttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0187900, RefSeq:Os01g0187900