Os01g0190400

From RiceWiki
Revision as of 04:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0190400| Description = Similar to Hexokinase| Version = NM_001048799.1 GI:115435011 GeneID:4326776| Length = 2975 bp| Definition = Oryza s...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0190400

Description

Similar to Hexokinase

Version

NM_001048799.1 GI:115435011 GeneID:4326776

Length

2975 bp

Definition

Oryza sativa Japonica Group Os01g0190400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4819155..4822129

Sequence Coding Region

4819365..4819685,4819759..4819840,4820018..4820148,4820244..4820342,4820484..4820639
,4820735..4820809,4821072..4821254,4821374..4821524,4821670..4821947

Expression

GEO Profiles:Os01g0190400

Genome Context

<gbrowseImage1> name=NC_008394:4819155..4822129 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4819155..4822129 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcgtggttgggtttgtctgaaccgaactccaaaggtctcgcctttcttgctctgaagcttttctttagcttttcgattcgcctgtcggggaccgggatcatggcggcggtggaggcggagaaggtggtggcggagctgcgggagaggtgcgcgacgccggcgtcgctgctgcgggatgtggcggcggcgatggccggcgagatgggcgccggcctggagaaggagggtgggagcagggtcaagatgctgctctcctacgtcgacaagctccccactgggagagaggatggattgttctatggattggacctaggaggaacaaacttccgggtgctcaaggttcatcttggtggcagcaagaagcatgtcgtcaactctgaatccagggaagtcagcatcccaccacacctgatgtcagggacctcctcggaattgtttggtttcattgctggggaattaggcaagtttgttgctgaagaggaggagggtactgacatgccaaacggcaagaagaaagagctaggattcaccttctcttttcctgtgaggcaacgatctgtggcatcgggtacccttgtcaagtggacaaaggcgttttccattgatgatgcagtaggtgaagatgtggtggctgaactacaaacggctatggtgaaacaaggtctggacatgcatgtagctgcattgattaatgatgctgttggaacattggctggagcaagatactacgatgaagatgttgtcgcaggtgtgatatttggtactggcacaaatgctgcatatgttgagaaggcaaatgctataccaaaatgggaaggggagttgcccaattcaggggatatggtcatcaatatggaatggggtaatttctattcatcgcatcttccagttactgaatacgatgaagcattagacaaggaaagcttaaaccctggagagcagatatatgagaagttaacatcaggaatgtatttaggtgaaatcgtaagaagagtgctgcttaaactgtccttgcagtctggaattttcggttctatagataactccaagctcaaaacttgtttccatctgcggactccgcacatttctgcaatgcaccatgatgaaacacctgacctaaagatagtggctgaaaaattgcatcaaatcctagagattacacatacatccttagagataaggaaaatggttgtcgaaatatgcgatatcgtggcaaggagggcagctcggctggctgctgctggtgttgcagggatcctcatgaagcttggaagaaatggcggcatcaacaatcagcgctcggtcatcgccattgatggaggtttgttcgaacactacaccaaattcagggaatgtttggagagcacgttgggtgagttgctgggagaggaggcttccaagtcggtagccgtcaagcacgcgaacgacgggtcagggataggggctgcccttattgcagcctctcaatctcgatga</cdnaseq>

Protein Sequence

<aaseq>SWLGLSEPNSKGLAFLALKLFFSFSIRLSGTGIMAAVEAEKVVA ELRERCATPASLLRDVAAAMAGEMGAGLEKEGGSRVKMLLSYVDKLPTGREDGLFYGL DLGGTNFRVLKVHLGGSKKHVVNSESREVSIPPHLMSGTSSELFGFIAGELGKFVAEE EEGTDMPNGKKKELGFTFSFPVRQRSVASGTLVKWTKAFSIDDAVGEDVVAELQTAMV KQGLDMHVAALINDAVGTLAGARYYDEDVVAGVIFGTGTNAAYVEKANAIPKWEGELP NSGDMVINMEWGNFYSSHLPVTEYDEALDKESLNPGEQIYEKLTSGMYLGEIVRRVLL KLSLQSGIFGSIDNSKLKTCFHLRTPHISAMHHDETPDLKIVAEKLHQILEITHTSLE IRKMVVEICDIVARRAARLAAAGVAGILMKLGRNGGINNQRSVIAIDGGLFEHYTKFR ECLESTLGELLGEEASKSVAVKHANDGSGIGAALIAASQSR</aaseq>

Gene Sequence

<dnaseqindica>2445..2765#2290..2371#1982..2112#1788..1886#1491..1646#1321..1395#876..1058#606..756#183..460#agatggatcaaaaccgccactgaaagggatcaactaaactactgatgaaaaaaagttgagtgctttagacaaaaacacaaaactttcacgtgcctccctccaatcccagattatttttctatagatcgatcgatcgagccccgtgaatgcgattctgcgcgcatttccggagcgtcttttgatcgtggttgggtttgtctgaaccgaactccaaaggtctcgcctttcttgctctgaagcttttctttagcttttcgattcgcctgtcggggaccgggatcatggcggcggtggaggcggagaaggtggtggcggagctgcgggagaggtgcgcgacgccggcgtcgctgctgcgggatgtggcggcggcgatggccggcgagatgggcgccggcctggagaaggagggtgggagcagggtcaagatgctgctctcctacgtcgacaagctccccactgggtcagtcagtatacctgcatatgcatcgcctcctctgaattctgaatttctgatttgtgttcatagcgtcagaaacaagagtgacagtagatacatctctgaaaatgatgggtttacactgatcagttttgtgccacgaattcaggagagaggatggattgttctatggattggacctaggaggaacaaacttccgggtgctcaaggttcatcttggtggcagcaagaagcatgtcgtcaactctgaatccagggaagtcagcatcccaccacacctgatgtcagggacctcctcggtgggtttttgtacgctgaatcatcatcatttgaccgagttttgctccattttgatgttgttccactgttgtgcatttttttatttgacgatattcgttgttttactatatgtctgcaggaattgtttggtttcattgctggggaattaggcaagtttgttgctgaagaggaggagggtactgacatgccaaacggcaagaagaaagagctaggattcaccttctcttttcctgtgaggcaacgatctgtggcatcgggtacccttgtcaagtggacaaaggcgttttccattgatgatgcagtaaggcgtccttcataaactcaacatgcatcgcatacattttttgtggtgatgtaaaaaatagtcctaattagtaactacagctctgcaaaacccattatttatatgaacatcttgcgatatgaacgttgttctagtcacaagccttgtcattaatacttgctagctcttactagtagatcagtttcacgcaaacaaaatatccatttttaagctgatatgagtgaatcttctatcagataaaacatttctctgaaatcaggtaggtgaagatgtggtggctgaactacaaacggctatggtgaaacaaggtctggacatgcatgtagctgcattggtgagtattgactggcttttacctttcataaacataatatatctacaatgtcaggtaaacatttttagtctgagagaacttttttgatgaaatagattaatgatgctgttggaacattggctggagcaagatactacgatgaagatgttgtcgcaggtgtgatatttggtactggcacaaatgctgcatatgttgagaaggcaaatgctataccaaaatgggaaggggagttgcccaattcaggggatatggtaagggacaaaggccatactcccaccttccattgaaatttaagcaataaattaactcacataagtttattttactcaacttttttgttgtatctttattcaatttctaagttttttttaagtgcgtttatcgtatttcaggtcatcaatatggaatggggtaatttctattcatcgcatcttccagttactgaatacgatgaagcattagacaaggaaagcttaaaccctggagagcaggcaagtttcttcagcaaaagaccacctaccctgcatgcctgtactgttggatcttgggtcttggctcaaccatatagttttgttttctttttcagatatatgagaagttaacatcaggaatgtatttaggtgaaatcgtaagaagagtgctgcttaaactgtccttgcagtctggaattttcggttctatagataactccaagctcaaaacttgtttccatctgcggtatgtcatttccttttgttttcacaattagcgctcttatgcaattcaggattgagtaggttgctttcaaatgcagcccatatgatatgaatgctcataagactgttttataaagtgtagaaaattctataacagattcaaggctgaccctaaaatatccgttaatgtggcgaacaggactccgcacatttctgcaatgcaccatgatgaaacacctgacctaaagatagtggctgaaaaattgcatcaaatcctagaggtatccatgcttctgaaaaagctcatattctgcatgtgtattctctgtagtgacatggtatgtatgcctgcagattacacatacatccttagagataaggaaaatggttgtcgaaatatgcgatatcgtggcaaggagggcagctcggctggctgctgctggtgttgcagggatcctcatgaagcttggaagaaatggcggcatcaacaatcagcgctcggtcatcgccattgatggaggtttgttcgaacactacaccaaattcagggaatgtttggagagcacgttgggtgagttgctgggagaggaggcttccaagtcggtagccgtcaagcacgcgaacgacgggtcagggataggggctgcccttattgcagcctctcaatctcgatgaaaatttgctagataaatagtagtatatgccgtccatttttgctctggagtgaaaaaaattattgaaaaaacctagctttgttgtatgtgctgcttgggcatggtggaactggaagcagtctgtaaccaaaatgaggcttgatatactgtcgccctgcatagttgtaacctgaaataaaattggaactgcaaaaccttcattgttacctat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0190400, RefSeq:Os01g0190400