Os01g0192300

From RiceWiki
Revision as of 04:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0192300| Description = Similar to I-box binding factor (Fragment)| Version = NM_001048812.1 GI:115435037 GeneID:4327305| Length = 2090 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0192300

Description

Similar to I-box binding factor (Fragment)

Version

NM_001048812.1 GI:115435037 GeneID:4327305

Length

2090 bp

Definition

Oryza sativa Japonica Group Os01g0192300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4970466..4972555

Sequence Coding Region

4970685..4971053,4971185..4971381,4971867..4972233

Expression

GEO Profiles:Os01g0192300

Genome Context

<gbrowseImage1> name=NC_008394:4970466..4972555 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4970466..4972555 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaggaaatgctccagctgcgggaacaatggccacaactccaggacttgcaccggccaaaggagcctgcaggagagtggcggcggttatggcggcggtggcgccggtggcgtgaggttgttcggggtgcagttgcacgtcggcggtgcgcctctgaagaagtgcttcagcatggagtgcctatcgtcgccgtcgccgtcgccgtcgccggcgtactacgccgcggtcgccgccgccgcctccaactcgtcgccgaccgtgtcgtcgtcgtcgtcgctggtgtcggtggaggaggccggcgagaagatggccaacgggtacctctccgatggcctcatggcgagagctcaggagaggaagaagggtgttccatggactgaagaggagcacaggaaattcctggtagggctcgagaagctcgggaaaggcgactggcgcggcatttcccggcacttcgtcacgacaagaacaccgacgcaggtggccagccatgcccagaagtatttcctcaggcagagcagcctcacgcagaagaagagaagatccagcctctttgacgtgattgaggatgcagaaaaggctccgagtgtgaatgaacgtctgaaactgagacacgagacagcctctgtgcctgctgaaatgggattccctgcactgtcactgggtatcagcagcatggcacagccagaagccatgctgctgcctcctccatccttaaccctgacgccaagctgttcatcaccagcagtgagcagcagcagcagcgaacaaccaagaacaatccatccttctctgatggtggcaaagcctcaggtgcaactgcaactccagccacctgatctggagctcaagatctcgactgtccgtcagaacgatcagcccagttcgtcgccgaggacgccttttttggggacaatcagggtcacttga</cdnaseq>

Protein Sequence

<aaseq>MARKCSSCGNNGHNSRTCTGQRSLQESGGGYGGGGAGGVRLFGV QLHVGGAPLKKCFSMECLSSPSPSPSPAYYAAVAAAASNSSPTVSSSSSLVSVEEAGE KMANGYLSDGLMARAQERKKGVPWTEEEHRKFLVGLEKLGKGDWRGISRHFVTTRTPT QVASHAQKYFLRQSSLTQKKRRSSLFDVIEDAEKAPSVNERLKLRHETASVPAEMGFP ALSLGISSMAQPEAMLLPPPSLTLTPSCSSPAVSSSSSEQPRTIHPSLMVAKPQVQLQ LQPPDLELKISTVRQNDQPSSSPRTPFLGTIRVT</aaseq>

Gene Sequence

<dnaseqindica>1503..1871#1175..1371#323..689#agaatcaatgtatcatggtgccccagcatttggattgaattgtcaataccataaaaggagatgatgccaatgtgtgtgtccccttccattggcaccaggtgttagctcctcagctagttgcttgtcccacaccacatctttctttctcctcccttattaagctactagatgctgctattgctacatctccacatgcaccatcttatctcaactccttagaattcccactcctcttcttcttgttcttcttgcttccctccaacttcttcttcttgttgttcttgctgttcttgtggttcttggcctgccatcggcggcgagcatggccaggaaatgctccagctgcgggaacaatggccacaactccaggacttgcaccggccaaaggagcctgcaggagagtggcggcggttatggcggcggtggcgccggtggcgtgaggttgttcggggtgcagttgcacgtcggcggtgcgcctctgaagaagtgcttcagcatggagtgcctatcgtcgccgtcgccgtcgccgtcgccggcgtactacgccgcggtcgccgccgccgcctccaactcgtcgccgaccgtgtcgtcgtcgtcgtcgctggtgtcggtggaggaggccggcgagaagatggccaacgggtacctctccgatggcctcatggcgagagctcaggagaggaagaagggtgagttcttgagagacatatggtttgtgcatgcttcactaatttgttgtggtttagcactaattacagccacctgacagtgatctaatcatcattaagactgaatttatttttgttgatgagaagttatttgacttcttttgttatgtccccttctccaatttttgccaccagttgctgtctgccatacaagcccatttttatgcttccaacttggtacaggaatatatgcatgactgacataaatttcctaagaatcagatttctgtctctcaagttgcaacctgaaactctcatccttatcacaaacaaagacctgatttatcctagttgtctcgtcctaatcatttgcatctagattcttgaactccaaacactagattgtttttgcagatatcaacagataaaaaaaaatcctctaaattgctgtgttttctacacctgaaattctgaacatgtcaaactcatcagttaactgtcatcaggtgttccatggactgaagaggagcacaggaaattcctggtagggctcgagaagctcgggaaaggcgactggcgcggcatttcccggcacttcgtcacgacaagaacaccgacgcaggtggccagccatgcccagaagtatttcctcaggcagagcagcctcacgcagaagaagagaagatccagcctctttgacgtggtaaacttcaaacatctttgcaacaatatctacacagacagtttcagacagcaagaatcatgtatttatatgagtgagttacagtaacctaacatgtctgaaaatttgatgttttttttcttttctttcagattgaggatgcagaaaaggctccgagtgtgaatgaacgtctgaaactgagacacgagacagcctctgtgcctgctgaaatgggattccctgcactgtcactgggtatcagcagcatggcacagccagaagccatgctgctgcctcctccatccttaaccctgacgccaagctgttcatcaccagcagtgagcagcagcagcagcgaacaaccaagaacaatccatccttctctgatggtggcaaagcctcaggtgcaactgcaactccagccacctgatctggagctcaagatctcgactgtccgtcagaacgatcagcccagttcgtcgccgaggacgccttttttggggacaatcagggtcacttgaacttaaagagagagagaagaagaagaaaaggaattatcttagagattactgaattatttgtgcctaaaaggagaagcttttgctagtggtgtatgtgtgtgtccccttggcaaaaacacaatgccatcttccaccatgtatcatttttataaggctattaggaagtgaagcttttactggactaatctagtcttgcaaataataaaaggaacggctgct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0192300, RefSeq:Os01g0192300