Os01g0193500

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Revision as of 04:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0193500| Description = Conserved hypothetical protein| Version = NM_001048816.1 GI:115435045 GeneID:4327310| Length = 1867 bp| Definition ...")
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Gene Name

Os01g0193500

Description

Conserved hypothetical protein

Version

NM_001048816.1 GI:115435045 GeneID:4327310

Length

1867 bp

Definition

Oryza sativa Japonica Group Os01g0193500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5017219..5019085

Sequence Coding Region

5017219..5018066,5018572..5019085

Expression

GEO Profiles:Os01g0193500

Genome Context

<gbrowseImage1> name=NC_008394:5017219..5019085 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5017219..5019085 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcagcagacggcggcgaccccttcgattctctaccggcggcgatcgccgccgacgtcctcggccgcgtcgccgacggggccgacatcgcggcgtactgcctcgcctcgcgggccttcctcgccgcctcctacgcctgctcccgtgtccacctccgcgccgccgcgctcgcacggcgccgctccgtcgccctcgccggagggggcgggggcgggccccccggcggctccgccatccgagcggccgccgggaacgccgcgtccctcctcgggccgcacctccgctccctcgagctcgacgcgtccgaggggtggggccacccggacgacgcgacgtgggtggaggagggggagttcgacgagggcggcgacctccacctcacggcccgggaggccgtggtggcgtgggcggacaccgccgccggcaacgctctccgggaggtggacgtcgccgactactggccgcagtcgtgctggcggaaggcggaggcgcttcctgtcatctcccacttctgtcatagtcttttgaaattgcgtctgaagaacgcatggctatccgttgacgggctaaagataatgcctaatctgactcatctgacacttgagttcattagattagatgatgaggatctcaacaaattgaatgagtgcttcccttgccttcagatcctcaatcttattggagttggagggctcaaggaccctaagattcaccttcatcaactaaagacttgccactgggaggtatcaaatgttccacggtcattaacaatccgtgcgcctaacttggttcgtcttgagctgaaatgtgttcgaccagatatgctcattttggataccccatccatgtttactctgaagttaacagttgataaacttggaccaaatgtccaagccgatggccttgtgagtttgaaaaatctgcggatagagtcattggatctaaagtccctcttgcaagtatttgcagagaatcatgatatcactacattagagcttgagctgcccacttctacaaacaaatatgaactttttgaagcagtgaagcccgagtatcttcttcagctgtttgccggcatcagcgaagtcaagttggcccctcggttttcatgtgaaatgacgcattgcctgatgttatgcaccagcaaccagtttagaagctgtttgaggagactcctgtttcatctaccgccattgaaggatgttcctcatcttgcacccttgtttaataactgtgctccatcttgcgaggtgaccattcttttccatgccgactccagcgatgatatccgccaagccgcgacatcagtttggacgctaaggtatccggggatcagatggcagtggggtacctggaactaa</cdnaseq>

Protein Sequence

<aaseq>MSADGGDPFDSLPAAIAADVLGRVADGADIAAYCLASRAFLAAS YACSRVHLRAAALARRRSVALAGGGGGGPPGGSAIRAAAGNAASLLGPHLRSLELDAS EGWGHPDDATWVEEGEFDEGGDLHLTAREAVVAWADTAAGNALREVDVADYWPQSCWR KAEALPVISHFCHSLLKLRLKNAWLSVDGLKIMPNLTHLTLEFIRLDDEDLNKLNECF PCLQILNLIGVGGLKDPKIHLHQLKTCHWEVSNVPRSLTIRAPNLVRLELKCVRPDML ILDTPSMFTLKLTVDKLGPNVQADGLVSLKNLRIESLDLKSLLQVFAENHDITTLELE LPTSTNKYELFEAVKPEYLLQLFAGISEVKLAPRFSCEMTHCLMLCTSNQFRSCLRRL LFHLPPLKDVPHLAPLFNNCAPSCEVTILFHADSSDDIRQAATSVWTLRYPGIRWQWG TWN</aaseq>

Gene Sequence

<dnaseqindica>1020..1867#1..514#atgtcagcagacggcggcgaccccttcgattctctaccggcggcgatcgccgccgacgtcctcggccgcgtcgccgacggggccgacatcgcggcgtactgcctcgcctcgcgggccttcctcgccgcctcctacgcctgctcccgtgtccacctccgcgccgccgcgctcgcacggcgccgctccgtcgccctcgccggagggggcgggggcgggccccccggcggctccgccatccgagcggccgccgggaacgccgcgtccctcctcgggccgcacctccgctccctcgagctcgacgcgtccgaggggtggggccacccggacgacgcgacgtgggtggaggagggggagttcgacgagggcggcgacctccacctcacggcccgggaggccgtggtggcgtgggcggacaccgccgccggcaacgctctccgggaggtggacgtcgccgactactggccgcagtcgtgctggcggaaggcggaggcgcttcctgtcatctcccacttctgtaattctctcttatctctgcatttttttactgcttgtttcatgttccttgttgtgatgatatcattgctctgtttgtttgaaaatctcgtggtagagttagcttctcacataagcaaatgcttgcacaaaggaaatttatggttaaacctgttgctcttatattagattttagtttgtgtgtgcaattgtatttcacttgtgcataatgcttaagaaagtgtggcttattatcctccgaaaatttagcttattcttgctgctcgccaatcaccagcccactttggaagtttgaataaaaagatggccatgaacgatgagaaacaagtagtagaatctattgtactcataacattatcatgtgaaaacttgatcttgcttacctgatgctggaatgcatagtaaatgtgcatacactttatatgtcatccagttcttgatatttcaacagtcaatttggtccaccttggtatggtctcagattgaaacttcggctatacatgcaggtcatagtcttttgaaattgcgtctgaagaacgcatggctatccgttgacgggctaaagataatgcctaatctgactcatctgacacttgagttcattagattagatgatgaggatctcaacaaattgaatgagtgcttcccttgccttcagatcctcaatcttattggagttggagggctcaaggaccctaagattcaccttcatcaactaaagacttgccactgggaggtatcaaatgttccacggtcattaacaatccgtgcgcctaacttggttcgtcttgagctgaaatgtgttcgaccagatatgctcattttggataccccatccatgtttactctgaagttaacagttgataaacttggaccaaatgtccaagccgatggccttgtgagtttgaaaaatctgcggatagagtcattggatctaaagtccctcttgcaagtatttgcagagaatcatgatatcactacattagagcttgagctgcccacttctacaaacaaatatgaactttttgaagcagtgaagcccgagtatcttcttcagctgtttgccggcatcagcgaagtcaagttggcccctcggttttcatgtgaaatgacgcattgcctgatgttatgcaccagcaaccagtttagaagctgtttgaggagactcctgtttcatctaccgccattgaaggatgttcctcatcttgcacccttgtttaataactgtgctccatcttgcgaggtgaccattcttttccatgccgactccagcgatgatatccgccaagccgcgacatcagtttggacgctaaggtatccggggatcagatggcagtggggtacctggaactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0193500, RefSeq:Os01g0193500