Os01g0194000

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Revision as of 04:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0194000| Description = Conserved hypothetical protein| Version = NM_001048819.1 GI:115435051 GeneID:4327313| Length = 1847 bp| Definition ...")
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Gene Name

Os01g0194000

Description

Conserved hypothetical protein

Version

NM_001048819.1 GI:115435051 GeneID:4327313

Length

1847 bp

Definition

Oryza sativa Japonica Group Os01g0194000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5036406..5038252

Sequence Coding Region

5036592..5037428,5037529..5037957,5038067..5038201

Expression

GEO Profiles:Os01g0194000

Genome Context

<gbrowseImage1> name=NC_008394:5036406..5038252 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5036406..5038252 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgataagcctggaggaatgctgctgggagatgcaactgcagcagcagcagaaaaggggggcaactcagcagcagctggtggttgtccccatcagggtgaggaaagatggatgggcaagtgatgccatgctttatgtgaatgtggagcttgtggacgcgaacacgccttctgagaacatcggaaggactgtttcattcagggagagcagggcgaggacgacgactccggcaccgacaatgcgggacaataggaagagcttggaggcagggacgtaccatgaggtccttgacctgaagcagctgcttgatctggctgacagggagcacaaggtggctgtgtacagcaggagcaagaggaattcggacagcagcagcgtcagcagcatgagcagtgtcagcagcagcagcaccatcagcatcagcagcgccagctcgagcggcggcgccagcccggagcccggcctgtcgtcgaaacgccggcttctaccgtggaggaggaagagccgggacttcgacaagaggagcagcgagtcgctctcccaagaattgcccatgaaatacatggatgatgatctggcgggaagctgggagactcgggagttcacgagcagggactcggagacgaagctgaggacgccggtgttcttcgcgtccatcgaccagcgcgacgacagcgccggcggggagagcgcgtgcacggcgctggtggccgtgctggcggcggcgctgcacgccaaccacccgacgatgccgacgcggccggagctggacgcgctcatcagggacggctcgtcggagtggaggcggctctgcgacgacgaggcgcacatggcggcgttcccgaacaggcacttcgacctggagacggtgctcgcggcgagggcgaggcccatcgccgtgcagcacgacagggccttcgtcggcttcttccagcccgagagcttcgcctccctctccggcgccatgtcgttcgacgacatctggcgagagatcgccgccgccgccggcggcgagccggggcgcgccgacgtgtacatcgtgagctggaacgaccacttcttcgtgctcaaggtggaaggcgactgctaccacgtcgtggacacgctcggcgagaggctcttcgagggctgcgacaaggcgtacatgctccggttcgacgccacgtcggagatgcgctcggtgtcgccgccgccgtcgtcgccgtcgccggaggaggaggtgatcgtcaccgggaaggagtgctgcagggagttcatcaagaggttcttggcggccatcccgctgagggaggagctggagatggagaggaagggctgcgccgacgcgccgcaccgccggctgcagatcgagttccacttcaccgtcctgaaagaagaagaacaagaccaagcaagaagatga</cdnaseq>

Protein Sequence

<aaseq>MISLEECCWEMQLQQQQKRGATQQQLVVVPIRVRKDGWASDAML YVNVELVDANTPSENIGRTVSFRESRARTTTPAPTMRDNRKSLEAGTYHEVLDLKQLL DLADREHKVAVYSRSKRNSDSSSVSSMSSVSSSSTISISSASSSGGASPEPGLSSKRR LLPWRRKSRDFDKRSSESLSQELPMKYMDDDLAGSWETREFTSRDSETKLRTPVFFAS IDQRDDSAGGESACTALVAVLAAALHANHPTMPTRPELDALIRDGSSEWRRLCDDEAH MAAFPNRHFDLETVLAARARPIAVQHDRAFVGFFQPESFASLSGAMSFDDIWREIAAA AGGEPGRADVYIVSWNDHFFVLKVEGDCYHVVDTLGERLFEGCDKAYMLRFDATSEMR SVSPPPSSPSPEEEVIVTGKECCREFIKRFLAAIPLREELEMERKGCADAPHRRLQIE FHFTVLKEEEQDQARR</aaseq>

Gene Sequence

<dnaseqindica>825..1661#296..724#52..186#gaacaaggaagaggcaaggacgtggtgaagcttgaggagattgggacagccatgataagcctggaggaatgctgctgggagatgcaactgcagcagcagcagaaaaggggggcaactcagcagcagctggtggttgtccccatcagggtgaggaaagatggatgggcaagtgatgccatgctttatgtaagcaaatatcttctccattttatttgcctcccaattactatatttctagtgaaaatgtttggtgtgcatttttttaatgagttgtatgggtgatgattgatttcaggtgaatgtggagcttgtggacgcgaacacgccttctgagaacatcggaaggactgtttcattcagggagagcagggcgaggacgacgactccggcaccgacaatgcgggacaataggaagagcttggaggcagggacgtaccatgaggtccttgacctgaagcagctgcttgatctggctgacagggagcacaaggtggctgtgtacagcaggagcaagaggaattcggacagcagcagcgtcagcagcatgagcagtgtcagcagcagcagcaccatcagcatcagcagcgccagctcgagcggcggcgccagcccggagcccggcctgtcgtcgaaacgccggcttctaccgtggaggaggaagagccgggacttcgacaagaggagcagcgagtcgctctcccaagaattgcccatgaaatacatggtgagaattggattagcattttttttctgatcatggaatcatgtttgcattggcaatggtgaattggtgattgatcgagatggtgatctgtgtcttacaggatgatgatctggcgggaagctgggagactcgggagttcacgagcagggactcggagacgaagctgaggacgccggtgttcttcgcgtccatcgaccagcgcgacgacagcgccggcggggagagcgcgtgcacggcgctggtggccgtgctggcggcggcgctgcacgccaaccacccgacgatgccgacgcggccggagctggacgcgctcatcagggacggctcgtcggagtggaggcggctctgcgacgacgaggcgcacatggcggcgttcccgaacaggcacttcgacctggagacggtgctcgcggcgagggcgaggcccatcgccgtgcagcacgacagggccttcgtcggcttcttccagcccgagagcttcgcctccctctccggcgccatgtcgttcgacgacatctggcgagagatcgccgccgccgccggcggcgagccggggcgcgccgacgtgtacatcgtgagctggaacgaccacttcttcgtgctcaaggtggaaggcgactgctaccacgtcgtggacacgctcggcgagaggctcttcgagggctgcgacaaggcgtacatgctccggttcgacgccacgtcggagatgcgctcggtgtcgccgccgccgtcgtcgccgtcgccggaggaggaggtgatcgtcaccgggaaggagtgctgcagggagttcatcaagaggttcttggcggccatcccgctgagggaggagctggagatggagaggaagggctgcgccgacgcgccgcaccgccggctgcagatcgagttccacttcaccgtcctgaaagaagaagaacaagaccaagcaagaagatgatgatgatcagtggttgtagctctgcaagctgactcaaagctgtagtctgtactaacaaacattcatgtacatttctatacatatacagtacaagaggaacaggaaatcacagcattgatacatacggatactacagggatttttggatagtaaatattattgtaggcagacacaggaaatttttac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0194000, RefSeq:Os01g0194000