Os01g0195200

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Revision as of 04:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0195200| Description = Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1)| Version = NM_001048824...")
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Gene Name

Os01g0195200

Description

Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1)

Version

NM_001048824.1 GI:115435061 GeneID:4327321

Length

2509 bp

Definition

Oryza sativa Japonica Group Os01g0195200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5108949..5111457

Sequence Coding Region

5109476..5110112,5110196..5110439,5110519..5110917,5111390..5111456

Expression

GEO Profiles:Os01g0195200

Genome Context

<gbrowseImage1> name=NC_008394:5108949..5111457 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5108949..5111457 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aggggttcggatggcttggctcaaagatttccacatagcgcacttccaaaattttccagatcatctggtacaggtcaaacactgttagctggtcgctatagttcaccatcaggtccatcaggttcattgggctcaagtatcgcaacatatgcaggacaggcaaagacattcaaatttgctgagattgagaaggccacaaacagctttgatgattcaacagtacttggagagggtggcttcggatgtgtctaccagggcacgcttgaagatggaaccagggttgcagtaaaggttctgaagaggtatgatggccaaggcgagagagagttcttggctgaggttgagatgctgggacgcttgcatcaccgaaatttggtcaagttgttaggcatatgtgtagaggagaacgcaagatgtctggtttatgaacttattccgaatggcagtgtagaatcccatttgcatggagtggatcttgagacagcaccactcgattggaatgcccgcatgaagatagccttgggggctgcacgagctcttgcatatttacacgaagattcaagcccttgtgtgattcatcgtgattttaagtcaagcaacatcctattggagcatgatttcacaccgaaagtgtctgatttcggactggccaggactgcaaggggggaggggaaccagcacatctccactcgtgtcatgggaacatttggatatgttgcaccggagtatgccatgacaggacatctccttgtcaagagcgatgtgtacagctatggagtagtgttgcttgagctcctcaccggtagaaagccagtggacatgtctaggcccggggggcaagaaaacctagtttcatgggctcgcccgcttctgaccaatgtggtaagcctacgtcaagctgttgatccacttcttggccctaacgtacccctggacaatgtcgcaaaagcagctgccatcgcatcaatgtgtgtacaacctgaggttgcgcatcgcccgagcatgggtgaagtagtgcaggccttaaaacttgtttgcagtgacggtgatgagggcctcggatcaggaagtttcagccaggaattggcggcacaagctgcagcaatctatgatgtaactggcatggaagctgagagggtgctgttatctgagatgtttggctcaacccctgtcttcactcccgctgcggattcaggttctttccgaaagcagtccagctcaggtccactgatgacaggcaagaacagaaagttctggcagagattgcgaagcctatcaagagggagtatgagtgagcatggtgcctcaccagattttgagacgcgctcgcagtgtagtaataggtga</cdnaseq>

Protein Sequence

<aaseq>RGSDGLAQRFPHSALPKFSRSSGTGQTLLAGRYSSPSGPSGSLG SSIATYAGQAKTFKFAEIEKATNSFDDSTVLGEGGFGCVYQGTLEDGTRVAVKVLKRY DGQGEREFLAEVEMLGRLHHRNLVKLLGICVEENARCLVYELIPNGSVESHLHGVDLE TAPLDWNARMKIALGAARALAYLHEDSSPCVIHRDFKSSNILLEHDFTPKVSDFGLAR TARGEGNQHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSR PGGQENLVSWARPLLTNVVSLRQAVDPLLGPNVPLDNVAKAAAIASMCVQPEVAHRPS MGEVVQALKLVCSDGDEGLGSGSFSQELAAQAAAIYDVTGMEAERVLLSEMFGSTPVF TPAADSGSFRKQSSSGPLMTGKNRKFWQRLRSLSRGSMSEHGASPDFETRSQCSNR</aaseq>

Gene Sequence

<dnaseqindica>1346..1982#1019..1262#541..939#2..68#caggggttcggatggcttggctcaaagatttccacatagcgcacttccaaaattttccagatcatctggtatgtgtactcatccagcatatttcctcatacagcagaacagcattagtgtgctttttcagtcatcattgggacctcataatctctgttttttttttcctatctgttctataggtactgcatttaaatgagctatcaaagtcctggtttcatctttaactgatctaggtttagccattgccactggaatcagatgctcccatctagcaagagctagtttcgctgttagccgtccatcctcgttgagagagtgtgaatcactctaatagggtttatgggcttactagtttttaaaaagttcaagcatatgcctgggacaaaaaaaaaatgcttatttaaaatggtgatgaacagtatttgcaagttgcaatgacttttcagataatgccttttctataatttccacttatcgtatcgttaccctgtcatgacagtactggtttccctcctgaaacatgttgaattattgcaggtacaggtcaaacactgttagctggtcgctatagttcaccatcaggtccatcaggttcattgggctcaagtatcgcaacatatgcaggacaggcaaagacattcaaatttgctgagattgagaaggccacaaacagctttgatgattcaacagtacttggagagggtggcttcggatgtgtctaccagggcacgcttgaagatggaaccagggttgcagtaaaggttctgaagaggtatgatggccaaggcgagagagagttcttggctgaggttgagatgctgggacgcttgcatcaccgaaatttggtcaagttgttaggcatatgtgtagaggagaacgcaagatgtctggtttatgaacttattccgaatggcagtgtagaatcccatttgcatggtaagtacttgaagaattaaggccaccagcctgtaaagtttaagcaattgactgaaagatctgcctttgacttttgtaggagtggatcttgagacagcaccactcgattggaatgcccgcatgaagatagccttgggggctgcacgagctcttgcatatttacacgaagattcaagcccttgtgtgattcatcgtgattttaagtcaagcaacatcctattggagcatgatttcacaccgaaagtgtctgatttcggactggccaggactgcaaggggggaggggaaccagcacatctccactcgtgtcatgggaacatttgggtatgaatcatatccctcatccctctgtgttctgatggaatcacaatttctaatgcataatatgactatgtctttcttctcagatatgttgcaccggagtatgccatgacaggacatctccttgtcaagagcgatgtgtacagctatggagtagtgttgcttgagctcctcaccggtagaaagccagtggacatgtctaggcccggggggcaagaaaacctagtttcatgggctcgcccgcttctgaccaatgtggtaagcctacgtcaagctgttgatccacttcttggccctaacgtacccctggacaatgtcgcaaaagcagctgccatcgcatcaatgtgtgtacaacctgaggttgcgcatcgcccgagcatgggtgaagtagtgcaggccttaaaacttgtttgcagtgacggtgatgagggcctcggatcaggaagtttcagccaggaattggcggcacaagctgcagcaatctatgatgtaactggcatggaagctgagagggtgctgttatctgagatgtttggctcaacccctgtcttcactcccgctgcggattcaggttctttccgaaagcagtccagctcaggtccactgatgacaggcaagaacagaaagttctggcagagattgcgaagcctatcaagagggagtatgagtgagcatggtgcctcaccagattttgagacgcgctcgcagtgtagtaataggtgaggtttttttctgttcccttttcaatcttgcgaagataaatattcagttgaatggaaatagagagttttcaggcctagtttctgtacattactcatgtggagataaaaggctgtatagttcagaaatcaggatagtagcagggcagagcttgagctgtggagtattcaaggatttaatgagatgagctcagatttggttccatactaggtttgtctgcatttggatttgtgatgtcgtctctttttcagcttgtcagtttgagttcatttgtgattttctttgttttctttttggtttgagttatgattagttgtttggtaggaactgttgatgtatagattcagactacatttagaaatgcatttgttgcaatgaagatgataagcttctttttttctggctagttgcagcttctggctgattccacttgtttcagaagaaactgccatgtaaatctgacagaattgcttctgttcttccatacctctaacccagtggatgatgctgctgcatcagcaacttgcgag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0195200, RefSeq:Os01g0195200