Os01g0196500

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Revision as of 04:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0196500| Description = Prenylated rab acceptor PRA1 family protein| Version = NM_001048829.2 GI:297596273 GeneID:4327326| Length = 2723 bp|...")
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Gene Name

Os01g0196500

Description

Prenylated rab acceptor PRA1 family protein

Version

NM_001048829.2 GI:297596273 GeneID:4327326

Length

2723 bp

Definition

Oryza sativa Japonica Group Os01g0196500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5212979..5215701

Sequence Coding Region

5215017..5215622

Expression

GEO Profiles:Os01g0196500

Genome Context

<gbrowseImage1> name=NC_008394:5212979..5215701 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5212979..5215701 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaagtacggcacaatccccacctcctcctcctcctcctcctcgggggccgcgccgccgccgctcccactcggtggcggcggcggggcctccccgctcgacttcttctcccgcgccaaggcccggggcgcgacggcgctggccacgcggcggccgtggcgggagctcgcggacccgcacgccctgggcctgccgccgagcctcgccgacgcctacctccgggtgcgcgccaacctcgcccactacgccatgaactacgccatcgtggtcctcgccgtcgtcttcctctccctcctgtggcacccggcctccctcatcgtgttcctcgtctgcatggtcgcatggctcgtcctctacttcctacgcgacgagccgatcgtgctcttcggccgcgtcgtcggggacggcgccgtgctcgccgccctcgccgccgtcacgctcgtcctcctcctgctcaccggcgccaccgccaacatcgtctcctcgctgctcatcggggtcctgctcgttgtgctgcacgccgcgctgcacaaggcggaggagaacgtcgatgatgaggtcggccgctggtacacgccggtgcccccgcagccggctcactag</cdnaseq>

Protein Sequence

<aaseq>MSKYGTIPTSSSSSSSGAAPPPLPLGGGGGASPLDFFSRAKARG ATALATRRPWRELADPHALGLPPSLADAYLRVRANLAHYAMNYAIVVLAVVFLSLLWH PASLIVFLVCMVAWLVLYFLRDEPIVLFGRVVGDGAVLAALAAVTLVLLLLTGATANI VSSLLIGVLLVVLHAALHKAEENVDDEVGRWYTPVPPQPAH</aaseq>

Gene Sequence

<dnaseqindica>80..685#tcatcttcttcctcccgatcccccccttccccttcccctcccggatccgaccccccgccgccgccgccgaccatctcccatgtcgaagtacggcacaatccccacctcctcctcctcctcctcctcgggggccgcgccgccgccgctcccactcggtggcggcggcggggcctccccgctcgacttcttctcccgcgccaaggcccggggcgcgacggcgctggccacgcggcggccgtggcgggagctcgcggacccgcacgccctgggcctgccgccgagcctcgccgacgcctacctccgggtgcgcgccaacctcgcccactacgccatgaactacgccatcgtggtcctcgccgtcgtcttcctctccctcctgtggcacccggcctccctcatcgtgttcctcgtctgcatggtcgcatggctcgtcctctacttcctacgcgacgagccgatcgtgctcttcggccgcgtcgtcggggacggcgccgtgctcgccgccctcgccgccgtcacgctcgtcctcctcctgctcaccggcgccaccgccaacatcgtctcctcgctgctcatcggggtcctgctcgttgtgctgcacgccgcgctgcacaaggcggaggagaacgtcgatgatgaggtcggccgctggtacacgccggtgcccccgcagccggctcactagttcgaggttgccttccgattcttcattcttggtccattcctacaaatgtcagtattgtgtatgaatttctgtttttaccgctgaattgtgtacaatttgttaatctcttcttttgtattgtgatcattacagtttaatgtggacacaatcagttttacgcttctttgctaaaatgatttgcaagactttaattgtgtagtagtagatagagcagctaaggcgctgtttttggatctcaatttgatcataataattgctagtacatgtttaacttgtgcttgctccatggatactgggaacttactcttgtattcatacattatctaaaaaaaaatcacacattacctgatttacatgatttgtcatgctacttacctgatttatcaatggcttgtagcaacaaaggaaagaaacatctgaatttgtcatctgaaaaacttttaggaatgcagaaaatttcaataagatctgggtgaaatagtaatccaagtacaactgtacaagtgagttgtgatatcaagcattcattatagtcagccagtcaggttaaacggagggatttttagaatcgtagtagtcatgccatctcattactgcctgatataacactgcactgctggttgtcgattgttttggtgtttgtctggttgtcattgatgccaaattattaatggcaaccaaaagacatggatatcatgaaggagcaaaatactgatatgtttgatggaaatctatggatcaacaggtccttgtagtttttatgagatatgtagtttgggaagttgtgggaggccacccattcaccacttctcttggaattaggtccagctaaccaacaatttaatcgaactcacttattagtttgctgacgcagtcaatcgaggcattgaatttgtgcgtcaaatgtgaactagataatgaaaacacagatacatataacgagctgaattcaaatgtagttttcagaagatttgatgcaatttgttctggttccattttctttgttcccggcagatacactattcctggacctggacttatcaaccgcttctctatattttttttctttcttagagggagcttcttaaattatttctaaaactgttgactgcaaatgcaaattattttgtactccttactttgtcatctatttggttgtttgtctaaccactaccatctcatttcgtacagtatcataatggcaatttacagcttcccttttcagtgtcagttgtttcttcatacgatgctttacgtgtgcatgtatttcttgtatgtttcccttgtatttgagtgttaggtcaatcttttacctggaaacttcatgatgtttagtcttgaaatttttacatcgacaattgcaaatcttctttgtagaaaattaaccattcgtaaatgtgtagaaaattgggaatttgagttcaccactgtaccagatgatatactcagcaagacagcaacaacatgtcttgtttagttgcgcacgatccacctaataagttaacttgaaaggtcactgaaacagaaacaatcaggaatcctgaagtacctcatgccctgcaattttgcttttatctgctatttccattttttccagttcatttttttatgcagctcttgtatgaaaactgagatacttcccattcgtttttgcaggatctgagtgtgtgattcacgcagaactgtgctgtcacactgcattgtttattcgagccgtgtcaagtgagcattgttaagttcggtctggggccggaagagctttttcatttcagatggcgactgggcgtgtttcacgcgctgctggctccacaggaagtcttggatccgatccagcgatgatccagggctgtgaattgcagcgaatccctcttgtttatccaacttttgtcaacgttatgcagccttttccccttgttttcatgtaccaaattggtagagagaaagtaaaaactagacttgattcaggagttgagaatcaatgccctgttacctgtgtgtgatttctttgtgctccataataacaacgatcttgtctcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0196500, RefSeq:Os01g0196500