Os01g0197200

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Revision as of 04:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0197200| Description = Similar to Ethylene-responsive RNA helicase| Version = NM_001185290.1 GI:297719714 GeneID:9268869| Length = 3853 bp|...")
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Gene Name

Os01g0197200

Description

Similar to Ethylene-responsive RNA helicase

Version

NM_001185290.1 GI:297719714 GeneID:9268869

Length

3853 bp

Definition

Oryza sativa Japonica Group Os01g0197200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5246340..5250192

Sequence Coding Region

5248306..5248521

Expression

GEO Profiles:Os01g0197200

Genome Context

<gbrowseImage1> name=NC_008394:5246340..5250192 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5246340..5250192 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tctactaacatttttccgtgtgttattaaagcacctggcgatggtccaattgttctggtgttagcccctacacgtgaacttgctgtgcagatacagcaagaggcaactaagtttggtgcgtcatcaaaaataaaaagtacttgcatatatggtggtgttccaaaaggtcctcaagttcgcgatcttcaaaaaggttctctttctttcttatgctag</cdnaseq>

Protein Sequence

<aaseq>STNIFPCVIKAPGDGPIVLVLAPTRELAVQIQQEATKFGASSKI KSTCIYGGVPKGPQVRDLQKGSLSFLC</aaseq>

Gene Sequence

<dnaseqindica>1672..1887#atcagttctccccacacttttcccctccgcttgaactcgccgccactgaaatgccctccaaatccaaatcctccaaattcgattcgcgtcctccgtttgcttcgcttcttcttctagaacccaccaaactctccggccacgtgcgccccgccctaaaccctagccgcaccccccgcctccctctcgtcgccggcgaccgccgccgccgccatgagccgcttcgacggccgcgccgcggaccccggctcgtaccgcgaccgccgcaggtaaccgctccaccaccgtggttttgatttctaaaccctaagccctaagtgttgggggttctgattgctcgttgggttgggttggggtttggttgcagcgaaggggcgttcgggggcgggacgagggcgttcgccccgacgagcaaggcggactccgcggccgcggccgctgacctggatgggctgccgcggttcgagaagaacttctacgtggagtccccctccgtggccggcatgacggaggaggaggtggaggcctaccggcgccgccgggagatcaccgtggagggccgcgacgtgcccaagccagtgcgcgagttccgcgatgtcggattcccaggtttcgtttgctgcgtgctactgctacccttgtcctgcacttactatagtactatgtatgcaatttagatgaacgtgctccaggaggaattggaatttagatggacgtgcttcaggaggggaatgtataggtctatttgtttcgttagctggttgtgttgtaaactacattgaatcatcaaagaattgaagtatcataacagttatttcacaccacaatttctgctttggcggaatttgttttggctgtaaatactcaaaactatttcaaccttgagccacattgtcacattagtgacatgtaactgcagaaccactctagaatgaggccaaaggttaaacagtaggtggttctaatagtcaatggtcaaaaggtgaactattcgaagttgagggttggaaactggagttaggccatgattaacagttgtaaaatgatttttccaaagaaaaacagccaacagcgataacatgtgcaaccagctcaagtgctgaacactaaatggtgaaagtatcatttggttttctttgaactccgattaggatttgttggtcctctcattaaatcccattatcatcacttcatcagccaattcattcatcaggaggaaaggatatgaatatgtcacttgttattcatttaagatctgttgtgctcttcaaagattattctgcttgcattcttggacttgagccattgataatttatgagcccctttaccttctgaactacattctttattattttgctcttttttaatcttggacatcttacattctatatttcctgatccaagatacttaacttccattgtgcagaatatgttttgcaagaaattacaaaagctgggtttgtagaacctactcctatccagtctcaaggttggccaatggcactgaggggacgtgatcttattggcattgctgaaacaggatcagggaaaacacttgcttaccttttacctgccattgttcatgttaatgctcagccgattctaggtgcgaaatgttgcttatgtttcttaaccgattttcttggatacattctggacttcttttgtggtaatctactaacatttttccgtgtgttattaaagcacctggcgatggtccaattgttctggtgttagcccctacacgtgaacttgctgtgcagatacagcaagaggcaactaagtttggtgcgtcatcaaaaataaaaagtacttgcatatatggtggtgttccaaaaggtcctcaagttcgcgatcttcaaaaaggttctctttctttcttatgctaggaagttcaacaaccagaaggaatcttttgtactgcacgcatgaagtcatgaacaatgtttgaaggacattcagttggtcaataatgaaatgacactgttcaaaaggacatcctattgatctatagcttaaatgatacattcatcctgtgtagtatatttagtttaatttgtcactgtttgcatccaggcgttgaaattgttatagccacgccaggaagactgattgatatgatagaatcacatcatacaaatttgcggagggtcacttaccttgttttagatgaggcagaccggatgctggatatgggctttgaacctcagattaagaaaattgtttctcaggtatgcctcttcttctgaatctattattccattctcaacaattttctaataattatgcttgctacatgttacatgcttttacttatacactgtcaacagaatgaaagggtagcatgtatccattagtaatcaatcagatgaagatcaacctataatctctccccaagtttgttgcatcaacctagtcctctcatccctagcagccaacactgcccagccataggcagagttttcctccatgaaccgtgcctacaacataccaacattgttttacatagtgttaagggattaccatctgccttttcagattcgtccagatcgccaaacattatattggagtgctacttggccaaaggaagttgaacagctagcaaggaactttcttttcgacccatacaaggtggttatttttgccaatgcatcattttgcagatgaatttatggcagactacggtatctgcttcatgtgaactcaattgctttttttgtgctgcaggtcataattggttctgaggagttgaaagctaatcatgccatttctcaacatgtggagatattatccgagagtcagaagtacaataagtaggatccgcgtgaccttttctcttcattacacactgaaatgattcattcagaatgcattgatgatgaaattctttgatgttaaggttggttaatctactggaggatataatggatggcagccggatattaatatttatggacacgaagaagggatgtgatcaaatcactagacagcttcggatggatggttggcctgctctgtctatccatggtgacaaaagccaagctgagagggattgggttctttctgaatttaaatcagggaaaagccctatcatgacagcgactgatgtggctgctcgaggcttaggtatacaaaaatcctcccagatcgatgaattatatttatttctgtaaactaatgccacttatatctggaaacagatgttaaggatgttaaatatgtcattaactatgactttccgggatcattggaggattatgttcatcgcattggtcgaactggcagagctggagcaaaaggaacagcttacacgtttttcactgctgctaatgccagatttgccaaggatctgatcaacatactagaagaagctggacaaaaggtcagccctgaattagctaatatgggtcgtggtgcaccacccccttcttcaggcaagctctctgtttatctaactattttcaaattattgtagaagcaagtttacagattctgatttctgcctactttcttttcacctatagtgctgcctaagaatttgaaaattctgaatgtgactgactattgtcacatctttgcaggccaccgtgatagatatagagggtatggaggtggccggtcatggagctgattttcatatgttgttattgcagagagcaatgtttggcctttctttgtggatggctatgtgtatttctggctcactgaatcttttaactaatgatcggtaaaggtagatttatataacttaaacaccatgccccttttatgagatatgactgggtccttctcatccactgtgtcaatagctcaaactgtggcattggcatataatattttgcttacagttattag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0197200, RefSeq:Os01g0197200