Os01g0197900

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Gene Name

Os01g0197900

Description

RNA dependent RNA polymerase family protein

Version

NM_001048838.1 GI:115435089 GeneID:4327335

Length

4823 bp

Definition

Oryza sativa Japonica Group Os01g0197900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5287136..5291958

Sequence Coding Region

5287440..5287691,5287935..5288107,5288913..5289060,5289537..5289696,5290021..5290166
,5290963..5291191,5291901..5291956

Expression

GEO Profiles:Os01g0197900

Genome Context

<gbrowseImage1> name=NC_008394:5287136..5291958 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5287136..5291958 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatactacagaccctaccggaacactcagacctaatgaagtctgcgtgatacttgaaaatggccagttttctggagatgttcttgtttataaacatcctgggttacattttggtgatatacatgtcttgaaagcaacatatattagggatctagaaaaggagtatgtgggatatgctaaatatgctatactcttccctatttctgggccgcggtctttggctgatgagatggccaacagtgattttgacggtgacatttattgggtctcaaaaaacccaaagttattagaacacttcaaaccttctgaaccgtgggtacaagctattaaaccaaaaaagaccaagcaaaagaaacctcaggattgtaatgaatccaaacttgaaaggctgctatttcatgagttcttgaaaacaagatttactcccagttttgcacttggtacggcagctgatagctggttagcatatatggaccgactattgacagattcacttgacgaaattgaaaagaaactaatagaggaaaagatgctaaagttagttgacctgtattatttggctttggatgctccgaagactgggaacaaggtcaatattccaagtgatctgatggtaaaacaatacccccacttcatgggccgcagtttttcgtaccattcatcatccatacttggacaaatctatgataaagcagaagatgtagaatctctgcgatcttgtaatgttcaaccaatcggggtatcattgctcccatgtttcatggaaagagaagcacctccagcagccaggcacctctggcaacaccgctacgaggagtacttgactgacagtacaatgctctatcgcgcaatggtagataaagaagaaaggaacatgaagttccaagaactctacgagaagtacaagcatatgctctacgatgcatctgaattcgagcagacacagagggaccccgacgacgtgttctcggaagcctgcgtgatctaccagattgtgtatgagaaagcacggtggagcaacgacgccagcaggtgtggcttcgcctggaaggtcgccggccgcgcgctgtgccacttctacgcgctcaagaacgagggtgacaccgcgctctgctcgcttccacttcttcgcaagatcatcaagaaggatcatcgcaggtag</cdnaseq>

Protein Sequence

<aaseq>MDTTDPTGTLRPNEVCVILENGQFSGDVLVYKHPGLHFGDIHVL KATYIRDLEKEYVGYAKYAILFPISGPRSLADEMANSDFDGDIYWVSKNPKLLEHFKP SEPWVQAIKPKKTKQKKPQDCNESKLERLLFHEFLKTRFTPSFALGTAADSWLAYMDR LLTDSLDEIEKKLIEEKMLKLVDLYYLALDAPKTGNKVNIPSDLMVKQYPHFMGRSFS YHSSSILGQIYDKAEDVESLRSCNVQPIGVSLLPCFMEREAPPAARHLWQHRYEEYLT DSTMLYRAMVDKEERNMKFQELYEKYKHMLYDASEFEQTQRDPDDVFSEACVIYQIVY EKARWSNDASRCGFAWKVAGRALCHFYALKNEGDTALCSLPLLRKIIKKDHRR</aaseq>

Gene Sequence

<dnaseqindica>4268..4519#3852..4024#2899..3046#2263..2422#1793..1938#768..996#3..58#taatggatactacagaccctaccggaacactcagacctaatgaagtctgcgtgatactgttagttacagaattaccccttttgcatctgcatatcctttcagcggtttttatatgtatcagtgatcctcagtttactattcaccagtcaccatatagcataggaatatccactatccagcatggacaccactggaactgctttaatgtcttgtaattttgtttagtagaaatgcaccaaaattgccatgctttcttccaagttcttgctgattagcaccataaattttgcactttaacaaggtgagatggagtttttgcaatttccttttagcaatgagaacgcatttttgtattcaaacaattatatattgctggcaatgattttgattgcaattgtgaagttcgttggtaaacagcggctaaagaaaatgtttagactagtaacttatgatactaaatacatctgggtatttggggcttcaggacttcaattgcatttttaagttcattttcccaaatttagactaacttgaacatgtagtcttttagacatcaggaaatctgtgtgactgtttttaataaatagaaaaaaaatctcaaatagaagatattatggattattaaaaggttttgaatttgtcaatgttaagaactaatgttctttgtcatatttcttccttgcatccattggttggtactgtatcacttatgtttgatcgcattctggtttgttctttacttattagctttatctgctgttcaacagtgaaaatggccagttttctggagatgttcttgtttataaacatcctgggttacattttggtgatatacatgtcttgaaagcaacatatattagggatctagaaaaggagtatgtgggatatgctaaatatgctatactcttccctatttctgggccgcggtctttggctgatgagatggccaacagtgattttgacggtgacatttattgggtctcaaaaaacccaaaggtttgttaatttctaattgacattttgccttattgtgcctttgtgcttgattatctttcattctcattaaaatccgtagtgaagttttgcttggttccaccctcgttcatagtgtagttgttccatccatatggccgtgatgctattttaactatggtctatatttattgagtctatccatgtagtcttcttggaaacactctcttctttgtaagaaaagtggcccttgttaaaccttaagggcaaaattggaccttttgccaaacatgtgttatgggcaaggtttcatagaggataaacaccgccaagtggatagctggaaggtgttggcttggttgggatgccagttagacatgaggggttaatttggttaccaaactaaataatattgcatgccttcatgtttaatgaggaaagtgtccattttacaaccctgatcttcagacctaaaaagtggacccttttcctaaatttagactatcgaagccattcacttttcaccttttaaacttggcccgaatgtagaatggtttcaggtggccaatcgctaatgaagcccaagttcagtggccaaaagtgttggaatattgacctatccgttttaattatgcttgctagttcttggactgattacagatttgctgtgcatgattcattagtaaatttggcattgttgtttcactgtatctttaaattataattcttgcataataaggtactgatataataacagcacattctgtctttaacttttgaaagaattattgctgactgatcctgaaaatgttcttttcagttattagaacacttcaaaccttctgaaccgtgggtacaagctattaaaccaaaaaagaccaagcaaaagaaacctcaggattgtaatgaatccaaacttgaaaggctgctatttcatgagttcttgaaaacaagatttactcccaggtattaataccaagcttgatttttctgatgcacagtaataattgtcaccagccttcctttttggaatggtaactagaaccatttcactataaagaaaacttagcagcatgaatctcatttagtttttagtaggcaatttattgaggagttcagcacttgattgaattcaatattctagaagtgcttgaatttctttttatatgaacctgatcagtacatttttaaaaatctagttttggtgacctcctgtagtatttcaatatatgcaacctttattggttttatacaatctaacatgattttggagttcttttctcctttcagttttgcacttggtacggcagctgatagctggttagcatatatggaccgactattgacagattcacttgacgaaattgaaaagaaactaatagaggaaaagatgctaaagttagttgacctgtattatttggctttggatgctccgaagactgggaacaaggttagttccaatcttgggcttacacattcttcagtttcaaatgcttttacacagtactgaatccttattacaatgattcatgaacggatgaaccaagtgtagttatctgaacaactcgtgattcattacaatgattcataaactgccaatattttatacggatagctgcagtgggtgtccagtacatagtaataagctgattattggataatgttgtaattaacatagttcaatataagttagaaatggaccagctacccggtgtccagggcaccatggtggttggaatagttgcatggtgacaggaatacgtttaacgtatgaagcagtgagatcaagtagggctacaagataaagataatagatgaaatgtgcaggtgtatctttattattttatatttgatgctttgtaagaccaaagttcattacatgggaatgcatattgcacttcaacagtttatgtgctgtcccaacaggtcaatattccaagtgatctgatggtaaaacaatacccccacttcatgggccgcagtttttcgtaccattcatcatccatacttggacaaatctatgataaagcagaagatgtagaatctctgcgatcttgtaatgttcaaccaatcggtatgttgtctgttttatttaggttccttttttcagttcttttatagttttatctgcagtagggagatgacatacattatttgttctgcttgtagcacataggctataacttatgagctgagcttgcagtagttaaggtattgccaaatggcaagcatattgagaaaatgtgatgttgttctcagtatatacatatgtggtatcatggaaagggtctatgccattttttaaaaaaaaacggtttgcattcattgcatgaaaaaatgattaattgtaaggcagtcaattaattggaaatagtaattaataaaccattatagtttcatgtttatatatattaatttatttatagaagtgatgatgaacaattacatctattctaattagttacctacgcacataaggataatcttaaattataatagtttacacttattcagacctagaaataagttgtggaaagatttatttctaaaattgtattaaaaagttacaaaaaaaatcatctgctgtttttaattatggagaagactatctacttatgcactcaaccgttaattttttactcatatggtccacctagtttcaaaacaaaatgaatgggagggagagatgtcaaaattgttcaatgagagaagcagaggttagttaccattctgcagaagcactagacatgattttggcatagaacacggtttcaattaaattggtttcatatgtttgatgagaatagtactataatatgaatgttctctctaacagtatgccttacttttttccctcttttcctttttacaataataaggggtatcattgctcccatgtttcatggaaagagaagcacctccagcagccaggcacctctggcaacaccgctacgaggagtacttgactgacagtacaatgctctatcgcgcaatggtagataaagaagaaaggaacatgaagttccaagaactctacgagaagtacaagcatgtgagtatccatccaaatttcctgagtaacagcgttttcaatggtcgaattaattacagctagctttttaacctaacgaaccctatctcgccgcctgggtggcgcggtaattagcccttagtcgggctgtggccctatgtttgtacatgtttgttttctgtacggttttattcttctctattcaatgaaattggcggctcgccgttttcgttttaacctaacgaacccttgaacctgctgcagatgctctacgatgcatctgaattcgagcagacacagagggaccccgacgacgtgttctcggaagcctgcgtgatctaccagattgtgtatgagaaagcacggtggagcaacgacgccagcaggtgtggcttcgcctggaaggtcgccggccgcgcgctgtgccacttctacgcgctcaagaacgagggtgacaccgcgctctgctcgcttccacttcttcgcaagatcatcaagaaggatcatcgcaggtagagtgtcgtgtttatggactactaccaccaaattaactatctattgtatcaagtatgtgtgtactgtagcagtaatgttaggagcagactttttaagctggtgatttagcacttctcatgaacatgtgggacaaagtactactagaaaaattattatgggccatgtttataccggcatggctgcttcaagtgaacctgctgtagtgaactagtgattatctgtaagcgcagtgtccagtgtgacaatgggcacaagtatgcatcactgttggtgtgcaaaatggacagcatggattctgtatggt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0197900, RefSeq:Os01g0197900