Os01g0200300

From RiceWiki
Revision as of 04:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0200300| Description = Hypothetical protein| Version = NM_001048850.1 GI:115435113 GeneID:4327348| Length = 2809 bp| Definition = Oryza sa...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0200300

Description

Hypothetical protein

Version

NM_001048850.1 GI:115435113 GeneID:4327348

Length

2809 bp

Definition

Oryza sativa Japonica Group Os01g0200300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5425562..5428370

Sequence Coding Region

5425693..5425842,5426282..5426431,5426833..5426944,5427100..5427461,5427558..5427692
,5427792..5427869,5427969..5428154,5428246..5428257

Expression

GEO Profiles:Os01g0200300

Genome Context

<gbrowseImage1> name=NC_008394:5425562..5428370 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5425562..5428370 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgttgcaggatgtctctcctccatcactactgcaatttttgcgcgaacaccggtcacagtgggccgacagcaatttagacgcattcttcgcctccacgatgaaaccaaacttctgcaatttacccatgtcccgtcttggaggattcagtggtcaggtcatacttcctttagcacacacgtttgaacctgaagagttcctggaagttatcaagctaggaaacgccagcaactaccaagatacactggtgcaccgtgatctgttcctcttgcagatgtacaatggagtagaggagagcagtgcaggaacatgttcagagctcatctttgcgcccatcgacgcatcgttcagtgatgattccccactgctgccttccggtttccgcatcatcccaatcgattctcctctcgacacgtcgagcccgaactgcacgttggatctcgcgtccacgctcgaagccgcgacgccacggagcaggatcagcggcgtcaatggcggcggcggcggctgtgctgctgctgcggcgagctctagctccaaggcggtgatgacgatcgcgttccagttcgcgttcgacggccacctgcaggacagcgtggccgccatggcgcggcagtacatgcgcaacatcatctcgtcggtgcagaggatcgccgtggcgctctcgtcctcccgcctcgtccctcccggcgccggcgccgccgccgcgcagctctcaccggtgactccggaggcggcgacgctgcccagatggatttgccagagctacagatttcattttggagatgaactcatcaaatctgtagatgcaaacagcagcaatgaatcgattctgaaagcagtttggcatcatccgagtgccatactctgctgctctctcaaggcgatgccagtgttcacatttgcaaaccagtctggcctcgacatgctcgaaacaactctggtggcgctccaagacatgacgctggagaaagttttcgacgatcaagggaggaagaacctgtgcacagagctccccaacatcatggagcaggggatggcgtgcatggagggaggggtgtgcgtgtcgagcgttgggagggcggcgtcgtacgagaaggcggtggcgtggaaggtggtcgacggcgacggcggcggcgcccactgcatctgcttcatgttcatcaactggaccttcctttga</cdnaseq>

Protein Sequence

<aaseq>MLLQDVSPPSLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPM SRLGGFSGQVILPLAHTFEPEEFLEVIKLGNASNYQDTLVHRDLFLLQMYNGVEESSA GTCSELIFAPIDASFSDDSPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEAATPRSR ISGVNGGGGGCAAAAASSSSKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRI AVALSSSRLVPPGAGAAAAQLSPVTPEAATLPRWICQSYRFHFGDELIKSVDANSSNE SILKAVWHHPSAILCCSLKAMPVFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKN LCTELPNIMEQGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDGGGAHCICFMFINWT FL</aaseq>

Gene Sequence

<dnaseqindica>2529..2678#1940..2089#1427..1538#910..1271#679..813#502..579#217..402#114..125#gcgtcgacgatgtttgcatctctgtcaattcatccaaagtgatcggttgcaatgcaacattcagcagtggactccctattgtcagtaccggtgttctttgtgccaaggcatccatgctgttgcaggttagcttcactatgaaactagaattaatattttttttgtttggttgatcatgtccagtttttttcatacaatatttctgctgtttgctaggatgtctctcctccatcactactgcaatttttgcgcgaacaccggtcacagtgggccgacagcaatttagacgcattcttcgcctccacgatgaaaccaaacttctgcaatttacccatgtcccgtcttggaggattcagtggtcaggtcatacttcctttagcacacacgtttgaacctgaagaggtaagttcatcttctactgtctgtcagttacataaaaggtcctgtccaattctgtcctcctgctcaattattttgatgcaaccatctattgtttttcagttcctggaagttatcaagctaggaaacgccagcaactaccaagatacactggtgcaccgtgatctgttcctcttgcaggtgacttcttgattcatgagacttatcaccagttgaagaatcattttcttttttttttcctctgtaaaacttgtgttcttggcctgattgcaatggcagatgtacaatggagtagaggagagcagtgcaggaacatgttcagagctcatctttgcgcccatcgacgcatcgttcagtgatgattccccactgctgccttccggtttccgcatcatcccaatcgattctcctctcgtaagtaaatctcacacaatagtttcaaatcaaatcttctgaatttttatgtttaaaaagaagttgttctgaatattctttccctgcaaatgtcaggacacgtcgagcccgaactgcacgttggatctcgcgtccacgctcgaagccgcgacgccacggagcaggatcagcggcgtcaatggcggcggcggcggctgtgctgctgctgcggcgagctctagctccaaggcggtgatgacgatcgcgttccagttcgcgttcgacggccacctgcaggacagcgtggccgccatggcgcggcagtacatgcgcaacatcatctcgtcggtgcagaggatcgccgtggcgctctcgtcctcccgcctcgtccctcccggcgccggcgccgccgccgcgcagctctcaccggtgactccggaggcggcgacgctgcccagatggatttgccagagctacaggtctgtggcttcgcagctgcttgtgtgatacagttcatatctgtcaagaaattttcacttgccatcatcgcaagattttttaaaaaaagttcactcttttttgaacgaaaaaaaaaagttcactcttcataactgatgatgctatgcttatacagatttcattttggagatgaactcatcaaatctgtagatgcaaacagcagcaatgaatcgattctgaaagcagtttggcatcatccgagtgccatactctgctgctctctcaaggtttcttcagccccctttttttcttatttagatacagattttatcttaatttttataagcatgttaattaaactgttaaactgtatatttcgtacgaaaatttttatatagaaactttaaaatataagataaatctatttttaaatttaaataattaaaatttaattaacgagatgttaaatgttaataactttctcattttacctgtccgtaatcttttatcttaaactcgaatggggccagtactcatactgctatgcatggaggattgtttgttctctgaatttatttccgggacttatgaatctttgctacagctcgactgaaattttgttttgacacaaattcaccttaaagttgacagtgtaacgcaccatttaaccatctgatttttcatgtaggcgatgccagtgttcacatttgcaaaccagtctggcctcgacatgctcgaaacaactctggtggcgctccaagacatgacgctggagaaagttttcgacgatcaagggaggaagaacctgtgcacagagctccccaacatcatggagcaggtataatcatatcacaaactgacatgagataagtactaatgcaaaaattatttttcatacataaaaaaagatacttttagattaataagtaattttgactttgatcaaaattaaactacttcaagtttgatcaagtttgattaattaagtttgtagataaatatagtaatatttacaacaccaaattagttttattaaattaataattaaatatatttttataatatatttgttttaggttaaaaatgttactacttttttcagtttgactttgaccttaagtcaaaaatgagttataatctaaaatggagcgagtacattacatggaatgcattaataatcttatcatcttatcaatagaagatacagtaagatttcaccgaggctttcatcagttgcaaattgattaattagtggcacgcgattaactaaattgcaggggatggcgtgcatggagggaggggtgtgcgtgtcgagcgttgggagggcggcgtcgtacgagaaggcggtggcgtggaaggtggtcgacggcgacggcggcggcgcccactgcatctgcttcatgttcatcaactggaccttcctttgatttcatttcattatacaccccaatgcaaaacggatatataatattacaactagtgcaatttacgtacgtaatctcatgaaacagcgtgtacaaatgttttggattttgagaaccgcggtgctagtttttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0200300, RefSeq:Os01g0200300