Os01g0200500

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Revision as of 04:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0200500| Description = MPPN family protein| Version = NM_001048852.1 GI:115435117 GeneID:4327063| Length = 3381 bp| Definition = Oryza sat...")
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Gene Name

Os01g0200500

Description

MPPN family protein

Version

NM_001048852.1 GI:115435117 GeneID:4327063

Length

3381 bp

Definition

Oryza sativa Japonica Group Os01g0200500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5441846..5445226

Sequence Coding Region

5441921..5442462,5443105..5443216,5444503..5444832

Expression

GEO Profiles:Os01g0200500

Genome Context

<gbrowseImage1> name=NC_008394:5441846..5445226 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5441846..5445226 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgcatccaggccggatcaccggcggcaccacccgccgtttctccgggacctctcgtcgccgatctcctcggccgtgcggctgcccccggcctccctccgccgcgagacgcaaggttccaccaccccgccgccgccgccgccgccgctgctgttcctcgacgacctctcccaccactccccctcgccgaggcccgccaccccacctcaggcggcggccatgagcccctcgcctccccctccccaccgcggcggcctcttctcctccaccccgctgcgctccaatgggtccccctccccggccgcgtggtggtcctcctcgagggaggagatggccagggagggctcgccggtcgatggtgtcgtgcagccgcagcagcagccgtctccgacgacggcgtctgggcagcagtcgcagcagcagaaggtgacgctcatcacgctgccgccacccagggaagttgcgcggccggagatgccgaaggattcgacaccttccgctggccgtgtcgacgaggaggagtgggtcaccgtttttggttttttacctggcgataccaacttggtactgagagaatttgagaagtgtggtatagtcttgagacatgtccctggtccaagggatgcgaactggatgcatatcctgtatcagagccggcatgatgcacaaaaagctctcaccaagcacggtcaacagttaaacagtgttcttatcatcggtgtgaagcaagtggacccatggcagcggcagtacctgaatgagaagacaaatgagaactttcaagttggtgcaacagatccatttccatcacagcatgtagcaccaagttcatttacaactagaaatgcactagcacctttgcctagcaattctatgccaaatggaatcggcaacgggagtggccgtggtgcttcgggggccattgcttcacccacaaaatcagtattgtccaaagttatggacctgatgttcggcctctaa</cdnaseq>

Protein Sequence

<aaseq>MSASRPDHRRHHPPFLRDLSSPISSAVRLPPASLRRETQGSTTP PPPPPPLLFLDDLSHHSPSPRPATPPQAAAMSPSPPPPHRGGLFSSTPLRSNGSPSPA AWWSSSREEMAREGSPVDGVVQPQQQPSPTTASGQQSQQQKVTLITLPPPREVARPEM PKDSTPSAGRVDEEEWVTVFGFLPGDTNLVLREFEKCGIVLRHVPGPRDANWMHILYQ SRHDAQKALTKHGQQLNSVLIIGVKQVDPWQRQYLNEKTNENFQVGATDPFPSQHVAP SSFTTRNALAPLPSNSMPNGIGNGSGRGASGAIASPTKSVLSKVMDLMFGL</aaseq>

Gene Sequence

<dnaseqindica>76..617#1260..1371#2658..2987#gggcactcgcttctccactagggtttctcgccgccgccgccgccgctcgccgtcgccgtcgccgccggatcagagatgagcgcatccaggccggatcaccggcggcaccacccgccgtttctccgggacctctcgtcgccgatctcctcggccgtgcggctgcccccggcctccctccgccgcgagacgcaaggttccaccaccccgccgccgccgccgccgccgctgctgttcctcgacgacctctcccaccactccccctcgccgaggcccgccaccccacctcaggcggcggccatgagcccctcgcctccccctccccaccgcggcggcctcttctcctccaccccgctgcgctccaatgggtccccctccccggccgcgtggtggtcctcctcgagggaggagatggccagggagggctcgccggtcgatggtgtcgtgcagccgcagcagcagccgtctccgacgacggcgtctgggcagcagtcgcagcagcagaaggtgacgctcatcacgctgccgccacccagggaagttgcgcggccggagatgccgaaggattcgacaccttccgctggccgtgtcgacgaggaggagtgggtcaccgtttttgggtatgtggcctctcctcttactgttatgatagtaggatgattaagttataaactagtataagtttgatgaaatttgtggcattgggttcatatagttgagtatgtgttatgccatatttcaattaaatctacatagtactgcaaaacgatgattgtctaagttgatcagtgagtatgtgattggatgctatgttgtcttgatgtttctgttgtagttgaatcgatatgctgaagtagagaatagagatcgtgattcatttcagtaattggaaaattttaaggttttgagtgtaggaagttggaaaaggagatcccaaaaatctagttaaatagtttagcaaacctttttcttgggatgaattaatatataatttcacgtgcactagacagtcagaaacagcatcctgatgctattctttcttttgggggaatcgtcatgaatgtattcatatgaccatgcattcgctctgtacatattgttcccttaatttagctttcaatagaatatgattctcattgttgtacttaggtttgtcctcgtcttactctatctcgaatagttcccctgacttggtgcatatttgattacactgttttacataattcactttgataatgttgcccctgtctttgtccttccagttttttacctggcgataccaacttggtactgagagaatttgagaagtgtggtatagtcttgagacatgtccctggtccaagggatgcgaactggatgcatatcctgtatcaggtaaaaactttgatgacttaattgttttagatttgataaaagataattaccgtgtttctattgcatatcaatagccaaaagaaaaggagagcaagctcaaaatgtaactggcttgtaaagttgttaagttgtgaaggggaggagtccagtggaaatgatacctcttaatggctatggcccagttttaagtctacatgagggccttgcaaagttgcaagctctgagctggcctggcccagaattcataacaactgtttgactatactgagcgcttgggatgacaaaagatagattgtggtctttaggaactttttatttcaagaatataaaatgattttgacctgtacaggtcatgacatgttgagttgaacccctttctgcactgtttgatgaggatctgcgcttttcttcgttaagaattttacatgtcttttggttatgtattatctgaactgctctaaaagttacctgcttttcattttggtcaggacatgattatgaaaagtttggaacattatgtaattatgtaagcagctaagagcatctccaagaggttagccaaatggtcttatggctagctagccaagaaagtgcctagccatatttcctgtgcactccaacagactagccaaattcccaaatcacactctccatagttcatattttttggtgggccataatagtgagtgtaggtggggaatggctagccggatggcccaaccaatggctagtctgttggaggacctctttttttttttttttttgctacgctagccaaattttgggatggctagtcatacacgtagtcttttggagatcctctcatatgcctgctctctgctagttttggtctctctgcatttgtttcagaatttaaattgtttagatgtgaaaacaaatcaacactaaaccaaaagatggatggtgtcacagacgcacagtttgtgatttgtggacctagtacatgacaatatctcatgcatgaactatgaggtgacaatgtggctcaagggtcaatatttccctttcatttgatcgtcatgtgtattttgttaggatagattgcagaattcagatgtagtatgataacagtacattgatgtgatgagcttttcctaccagcaataatgttcgtatgtagggcttgaccatatgcttaattcaatcatgattacaaactacaaatatatgcgagatatcactgaatgttcctgttgccagttctgaccattgtttgttatgtatgtttctaattgctgatctctatcttgttcgacatcttccagagccggcatgatgcacaaaaagctctcaccaagcacggtcaacagttaaacagtgttcttatcatcggtgtgaagcaagtggacccatggcagcggcagtacctgaatgagaagacaaatgagaactttcaagttggtgcaacagatccatttccatcacagcatgtagcaccaagttcatttacaactagaaatgcactagcacctttgcctagcaattctatgccaaatggaatcggcaacgggagtggccgtggtgcttcgggggccattgcttcacccacaaaatcagtattgtccaaagttatggacctgatgttcggcctctaaatcctgttaccaagtactggctgttattcttttggctgttccaaggcaaatcgaggattactgatcataacatttcttattgttgggtttttcgcaccgaagtgacattattggtccacagaatctgtattgtaccgagcctaagatcatcagggtgtcatactggtatatcacccggtcggtctggagctagtgttgatggtgtttcgctcgtaagcattcagtggatcatccaataccaaaccatatggaaattatgtccatggaaatatcatcaagtatcatcctggttttatacatattgaaatgattctgacctgtatgtgaatgcatcttagtaaattgttttcgaatgatttgacatgagagcctatatatatgttgaatgcgtctt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0200500, RefSeq:Os01g0200500